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Microbe : Conexibacter woesei

Microbe Description

NBRC No. 100937
Scientific name Conexibacter woesei
Synonymous name Not assigned
History JCM 11494 <- P. Monciardini, ID131577
Other culture collection No. CCUG 47730=CIP 108061=DSM 14684=JCM 11494=KCTC 19437=KCTC 9949
Other No. ID131577
Reference
12710628
Conexibacter woesei gen. nov., sp. nov., a novel representative of a deep evolutionary line of descent within the class Actinobacteria. (Int J Syst Evol Microbiol. 2003)

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseCwoe_1888 Cwoe_1028
n-alkane hydroxylation(NFUNC_0008)
RequireB
ALKB
(NRULE_0024)
Alkane 1-monooxygenaseCwoe_5739
Participant 
RUBA
(NRULE_0039)
RubredoxinCwoe_5738 Cwoe_1559
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinCwoe_2076 Cwoe_5928 Cwoe_0434 Cwoe_0435 Cwoe_5395 Cwoe_4003 Cwoe_2731
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
RequireA
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseCwoe_3371
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
RequireD
HPH
(NRULE_0174)
Hygromycin-B 4-O-kinaseCwoe_2613
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferaseCwoe_2854
TRPE
(NRULE_0143)
Anthranilate synthase component ICwoe_2853
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseCwoe_0290
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseCwoe_5676
Biotin biosynthesis(NFUNC_0051)
RequireA
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthaseCwoe_1570 Cwoe_0424
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseCwoe_0421
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDCwoe_1568
BIOB
(NRULE_0185)
Biotin synthaseCwoe_1571 Cwoe_0422
Freeze resistance (by antifreeze protein)(NFUNC_0019)
RequireA
AFP
(NRULE_0089)
Ice-structuring proteinCwoe_3132 Cwoe_3142
GABA biosynthesis(NFUNC_0066)
RequireA
GAD
(NRULE_0231)
Glutamate decarboxylaseCwoe_3467
Hygromycin resistance(NFUNC_0055)
RequireB
HPH
(NRULE_0174)
Hygromycin-B 4-O-kinaseCwoe_2613
Metal-binding protein(NFUNC_0105)
RequireA
MOP
(NRULE_0322)
Putative molybdenum-binding proteinCwoe_3462 Cwoe_4911 Cwoe_3465 Cwoe_5438 Cwoe_0507
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCwoe_0663 Cwoe_0505 Cwoe_4425 Cwoe_3464 Cwoe_2936
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRCwoe_5668
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCwoe_0663 Cwoe_0505 Cwoe_4425 Cwoe_2936 Cwoe_3464
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinCwoe_3463 Cwoe_0506
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinCwoe_3462
(R)-pantothenate biosynthesis(NFUNC_0030)
RequireA
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseCwoe_2890
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseCwoe_2889
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseCwoe_1046
PANC
(NRULE_0118)
Pantothenate synthetaseCwoe_2891
Phenol degradation(NFUNC_0028)
RequireB
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseCwoe_4365
Participant 
FDR2
(NRULE_0057)
Ferredoxin reductaseCwoe_0443
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentCwoe_5662 Cwoe_4361 Cwoe_2807 Cwoe_2202 Cwoe_1401
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinCwoe_5395 Cwoe_5928 Cwoe_4003 Cwoe_2731 Cwoe_2076 Cwoe_0435 Cwoe_0434
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseCwoe_4363 Cwoe_0945 Cwoe_2004 Cwoe_2144 Cwoe_2676 Cwoe_2815 Cwoe_4010
Riboflavin biosynthesis(NFUNC_0058)
RequireA
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseCwoe_4021 Cwoe_2143 Cwoe_3706
RIBA
(NRULE_0201)
GTP cyclohydrolase-2Cwoe_3706 Cwoe_2143 Cwoe_4021
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDCwoe_3708
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseCwoe_3705
RIBE
(NRULE_0204)
Riboflavin synthaseCwoe_3707
Participant 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFCwoe_3227
Streptomycin resistance(NFUNC_0054)
RequireA
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseCwoe_3371
Trehalose biosynthesis (from D-glucose and ADP-glucose)(NFUNC_0032)
RequireA
TRET
(NRULE_0121)
Trehalose synthaseCwoe_5908
Vancomycin resistance (via D-Ala-D-Lac precursor)(NFUNC_0089)
RequireA
VANA
(NRULE_0265)
D-alanine--D-lactate ligaseCwoe_1414
VANH
(NRULE_0266)
D-specific alpha-keto acid dehydrogenaseCwoe_1413
VANX
(NRULE_0267)
D-alanyl-D-alanine dipeptidaseCwoe_1415
Participant 
VANR
(NRULE_0284)
Two-component system response regulator VanRCwoe_1412
 
VANS
(NRULE_0290)
Two-component system histidine kinase VanSCwoe_1411
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
RequireA
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSCwoe_3160
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTCwoe_3161

Genomic Overview

BioProject IDPRJNA20745
Locus_tagCWOE
INSDC entriesCP001854
Sequence statusComplete
Current status
Contig number1
Size(bp) 6,359,369
Gene 5,914
Finishing goal
Assembly method
Coverage
Technology
Reference
  • Complete genome sequence of Conexibacter woesei type strain (ID131577). (Stand Genomic Sci. 2010) PMID: 21304704

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
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FASTA
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FASTA
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TSV
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1.8 MB 1.7 MB 1.2 MB 464.4 KB