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微生物 : Corynebacterium glutamicum

微生物株情報

NBRC番号 12168
学名 Corynebacterium glutamicum
別名（シノニム） Brevibacterium divaricatum
Corynebacterium lilium
由来 IFO 12168 <- ATCC 13032 <- Kyowa Hakko Kogyo Co., Ltd. (534)
他保存機関番号 ATCC 13032=CCM 2428=CCUG 27702=CIP 82.8=DSM 20300=HAMBI 2052=IAM 12435=JCM 1318=LMG 3730=NCCB 71034=NCIB 10025=NRRL B-2784
他株番号 534
参考文献
406255
The cell wall composition and distribution of free mycolic acids in named strains of coryneform bacteria and in isolates from various natural sources. (J Appl Bacteriol. 1977)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseCgl0588
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseCgl0997 Cgl3031
TRPE
(NRULE_0143)
Anthranilate synthase component ICgl3029
Arsenical resistance(NFUNC_0004)
必須D
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBCgl1510 Cgl0262
ARSC1
(NRULE_0017)
Arsenate reductaseCgl1094
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseCgl1515
Benzoate degradation (via hydroxylation by dioxygenase)(NFUNC_0017)
必須A
BENA
(NRULE_0046)
Benzoate 1,2-dioxygenase alpha subunitCgl2404
BENB
(NRULE_0047)
Benzoate 1,2-dioxygenase beta subunitCgl2405
BEND
(NRULE_0082)
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenaseCgl2407
任意 
BENC
(NRULE_0055)
Benzoate 1,2-dioxygenase electron transfer componentCgl2406
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentCgl2384 Cgl2406
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinCgl3040 Cgl2190 Cgl2383 Cgl2404
Catechol degradation (beta-ketoadipate pathway)(NFUNC_0013)
必須A
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseCgl2402
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomeraseCgl2401
CATC
(NRULE_0054)
Muconolactone isomeraseCgl2400
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseCgl2393
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit ACgl2390
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit BCgl2389
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseCgl2392
B
CATA
(NRULE_0052)
Catechol 1,2-dioxygenaseCgl2402
CATC
(NRULE_0054)
Muconolactone isomeraseCgl2400
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseCgl2393
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit ACgl2390
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit BCgl2389
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseCgl2392
CATB1
(NRULE_0386)
Muconate cycloisomeraseCgl2401
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseCgl1115
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinCgl0729
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCgl0214 Cgl2461
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCgl0214 Cgl2461
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseCgl0135
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseCgl0114
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseCgl1089
PANC
(NRULE_0118)
Pantothenate synthetaseCgl0113
Phenol degradation(NFUNC_0028)
必須C
PHEA2
(NRULE_0084)
Aromatic ring hydroxylaseCgl2681
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentCgl2406 Cgl2384
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinCgl2404 Cgl2190 Cgl2383 Cgl3040
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseCgl1011 Cgl1280
Protocatechuate degradation (beta-ketoadipate pathway)(NFUNC_0014)
必須A
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunitCgl2397
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunitCgl2398
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomeraseCgl2396
PCAC
(NRULE_0069)
4-carboxymuconolactone decarboxylaseCgl2395
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseCgl2393
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit ACgl2390
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit BCgl2389
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseCgl2392
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseCgl2118
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseCgl2125
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeCgl2107
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseCgl2303
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseCgl2624
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseCgl2626
Uptake of osmoprotectant(NFUNC_0061)
必須C
BCCT
(NRULE_0220)
BCCT family transporterCgl2334 Cgl0892 Cgl2312
E
OPUE
(NRULE_0222)
Sodium/proline symporterCgl1163
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSCgl0788
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTCgl0789

ゲノム配列情報

BioProject IDPRJNA307
ローカスタグCGL
INSDC entriesBA000036
ステータスComplete
解析状況
コンティグ数1
サイズ(bp) 3,309,401
遺伝子数 3,099
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
uncompressed
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