Rifamycin : CDS list
Contig | CDS ID | start | stop | dir | product | gene | keyword | category |
---|---|---|---|---|---|---|---|---|
AF040570 | Rifam_00010 | 145 | 720 | + | putative 50S ribosomal protein L10 | rplJ | 4.2 translation | |
AF040570 | Rifam_00020 | 770 | 1153 | + | putative 50S ribosomal protein L7/L12 | rplL | 4.2 translation | |
AF040570 | Rifam_00030 | 1559 | 2731 | + | putative ABC transporter ATP-binding protein | 4.3 transport | ||
AF040570 | Rifam_00040 | 2770 | 3522 | + | YrbE family protein | mce operon | 5.2 function unknown | |
AF040570 | Rifam_00050 | 3527 | 4363 | + | YrbE family protein | mce operon | 5.2 function unknown | |
AF040570 | Rifam_00060 | 4360 | 5685 | + | mammalian cell entry family protein | mce operon | 5.2 function unknown | |
AF040570 | Rifam_00070 | 5682 | 6710 | + | mammalian cell entry family protein | mce operon | 5.2 function unknown | |
AF040570 | Rifam_00080 | 6707 | 7693 | + | mammalian cell entry family protein | mce operon | 5.2 function unknown | |
AF040570 | Rifam_00090 | 7690 | 8874 | + | mammalian cell entry family protein | mce operon | 5.2 function unknown | |
AF040570 | Rifam_00100 | 8871 | 10043 | + | mammalian cell entry family protein | mce operon | 5.2 function unknown | |
AF040570 | Rifam_00110 | 10043 | 11308 | + | mammalian cell entry family protein | mce operon | 5.2 function unknown | |
AF040570 | Rifam_00120 | 11346 | 11921 | + | hypothetical protein | 5.4 hypothetical protein | ||
AF040570 | Rifam_00130 | 11944 | 12981 | + | hypothetical protein | 5.4 hypothetical protein | ||
AF040570 | Rifam_00140 | 14020 | 12998 | - | hypothetical protein | 5.4 hypothetical protein | ||
AF040570 | Rifam_00160 | 14341 | 15309 | + | putative oxidoreductase | rifS | 5.1 general function | |
AF040570 | Rifam_00170 | 15306 | 16073 | + | hypothetical protein | rifT | 5.4 hypothetical protein | |
AF040570 | Rifam_00190 | 16250 | 16477 | + | hypothetical protein | 5.4 hypothetical protein | ||
AF040570 | Rifam_00200 | 16510 | 17700 | + | putative cytochrome P450 | hydroxylate | 3.3 modification reduction | |
AF040570 | Rifam_00210 | 17741 | 31948 | + | polyketide synthase | rifA | 1.1 PKS | |
AF040570 | Rifam_00220 | 31982 | 47164 | + | polyketide synthase | rifB | 1.1 PKS | |
AF040570 | Rifam_00230 | 47174 | 52465 | + | polyketide synthase | rifC | 1.1 PKS | |
AF040570 | Rifam_00240 | 52544 | 57730 | + | polyketide synthase | rifD | 1.1 PKS | |
AF040570 | Rifam_00250 | 57778 | 68019 | + | polyketide synthase | rifE | 1.1 PKS | |
AF040570 | Rifam_00260 | 68016 | 68798 | + | amide synthase | rifF | 1.4 Other | |
AF040570 | Rifam_00270 | 68818 | 69006 | + | hypothetical protein | 5.4 hypothetical protein | ||
AF040570 | Rifam_00280 | 69003 | 70058 | + | putative aminodehydroquinate synthase | rifG | AHBA | 2.2 modification addition of starter unit |
AF040570 | Rifam_00290 | 70055 | 71380 | + | 3,4-dideoxy-4-amino-D-arabino-heptulosonate 7-phosphate synthase aminoDAHP synthase | rifH | AHBA | 2.2 modification addition of starter unit |
AF040570 | Rifam_00300 | 71400 | 72191 | + | aminoshikimate dehydrogenase | rifI | (AHBA) | 2.2 modification addition of starter unit |
AF040570 | Rifam_00310 | 72331 | 73497 | + | 3-amino-5-hydroxybenzoic acid synthase/UDP-3-keto-D-glucose aminotransferase AHBA synthase/UDP-3-keto-D-glucose aminotransferase | rifK | AHBA | 2.2 modification addition of starter unit |
AF040570 | Rifam_00320 | 73571 | 74647 | + | UDP-glucose C-3 dehydrogenase | rifL | AHBA | 2.2 modification addition of starter unit |
AF040570 | Rifam_00330 | 74662 | 75360 | + | putative hydrolase | rifM | AHBA | 2.2 modification addition of starter unit |
AF040570 | Rifam_00340 | 75365 | 76276 | + | kanosamine kinase | rifN | AHBA | 2.2 modification addition of starter unit |
AF040570 | Rifam_00350 | 76343 | 77110 | + | hypothetical protein | rifO | 5.4 hypothetical protein | |
AF040570 | Rifam_00360 | 77187 | 78119 | + | putative esterase | 5.1 general function | ||
AF040570 | Rifam_00370 | 78416 | 79984 | + | rifamycin resistance transporter | rifP | 4.3 transport | |
AF040570 | Rifam_00380 | 80000 | 80728 | + | putative TetR family transcriptional regulator | rifQ | 4.1 transcriptional regulator | |
AF040570 | Rifam_00390 | 81235 | 80735 | - | pyridoxamine 5'-phosphate oxidase-like FMN-binding domain protein | 5.2 function unknown | ||
AF040570 | Rifam_00400 | 82531 | 81320 | - | putative cytochrome P450 | 5.1 general function | ||
AF040570 | Rifam_00410 | 83827 | 82562 | - | cytochrome P450 | 3.3 modification reduction | ||
AF040570 | Rifam_00420 | 85208 | 83901 | - | putative pyridoxamine 5'-phosphate-dependent NDP-hexose C-3 dehydratase | 5.1 general function | ||
AF040570 | Rifam_00430 | 85411 | 86556 | + | putative glycosyltransferase | 5.1 general function | ||
AF040570 | Rifam_00440 | 86563 | 87207 | + | putative NDP-hexose epimerase | 5.1 general function | ||
AF040570 | Rifam_00470 | 88562 | 87270 | - | putative aminotransferase | 5.1 general function | ||
AF040570 | Rifam_00480 | 89579 | 88587 | - | putative NDP-hexose C-3 ketoreductase | 5.1 general function | ||
AF040570 | Rifam_00490 | 89646 | 90611 | + | hypothetical protein | 5.4 hypothetical protein | ||
AF040570 | Rifam_00500 | 90638 | 91708 | + | putative oxidoreductase | 5.1 general function | ||
AF040570 | Rifam_00510 | 91789 | 93210 | + | putative NDP-hexose 2,3-dehydratase | 5.1 general function | ||
AF040570 | Rifam_00520 | 94810 | 93305 | - | putative hydroxylase | naphthalene ring formation | 1.4 Other | |
AF040570 | Rifam_00530 | 96037 | 94826 | - | C-25 O-acetyltransferase | 3.4 other modification | ||
AF040570 | Rifam_00540 | 96813 | 96034 | - | type II thioesterase | rifR | type II thioesterase | 1.4 Other |
AF040570 | Rifam_00550 | 98101 | 96833 | - | putative cytochrome P450 | 5.1 general function | ||
AF040570 | Rifam_00560 | 98368 | 99186 | + | C-27 O-methyltransferase | 3.2 modification methylation | ||
AF040570 | Rifam_00570 | 99201 | 99893 | + | putative transketolase(fragment) | 3.4 other modification | ||
AF040570 | Rifam_00580 | 99890 | 100801 | + | putative transketolase(fragment) | 3.4 other modification | ||
AF040570 | Rifam_00590 | 102231 | 101062 | - | putative cytochrome P450 | 3.3 modification reduction | ||
AF040570 | Rifam_00600 | 102476 | 102967 | + | putative aminodehydroquinate dehydratase | rifJ | AHBA | 2.2 modification addition of starter unit |
AF040570 | Rifam_00610 | 103594 | 104808 | + | putative LuxR family transcriptional regulator | 4.1 transcriptional regulator | ||
AF040570 | Rifam_00620 | 104813 | 105298 | + | hypothetical protein | 5.4 hypothetical protein | ||
AF040570 | Rifam_00630 | 105773 | 109276 | + | putative rifamycin-resistant DNA-directed RNA polymerase subunit beta | rpoB | 4.4 resistance | |
AF040570 | Rifam_00640 | 109375 | 109528 | + | putative DNA-directed RNA polymerase subunit beta'(fragment) | rpoC | 5.1 general function |