BLAST table : Cosmo_00050

DBUniProtKB
accessionDBalignmentEvalueScoreIdent.linkproductgeneorganismec
1
Q2PZS1_9ACTO
(Q2PZS1)
[query] 1 - 325 (325)
[subject] 1 - 325 (325)
1e-176 623   100% CosY cosY Streptomyces olindensis
2
C6A254_THESM
(C6A254)
[query] 72 - 320 (325)
[subject] 75 - 325 (326)
2e-09 67.8 26% Ornithine cyclodeaminase TSIB_0634 Thermococcus sibiricus (strain MM 739 / DSM 12597)
3
F4LT57_TEPAE
(F4LT57)
[query] 93 - 228 (325)
[subject] 109 - 244 (338)
2e-08 64.7 28% Ornithine cyclodeaminase TepRe1_2344 Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) 4.3.1.12
4
D9PTZ2_METTM
(D9PTZ2)
[query] 82 - 209 (325)
[subject] 91 - 219 (330)
3e-08 63.9 32% Predicted alanine dehydrogenase MTBMA_c00800 Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg)
Methanobacterium thermoautotrophicum
1.4.1.1
5
A9D777_9GAMM
(A9D777)
[query] 95 - 209 (325)
[subject] 99 - 215 (318)
1e-07 62.4 32% Ornithine cyclodeaminase KT99_20841 Shewanella benthica KT99 4.3.1.12
6
D1CFQ2_THET1
(D1CFQ2)
[query] 1 - 320 (325)
[subject] 1 - 316 (317)
3e-07 60.8 24% Ornithine cyclodeaminase Tter_0841 Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) 4.3.1.12
7
E6P9D6_9ARCH
(E6P9D6)
[query] 93 - 320 (325)
[subject] 107 - 324 (325)
3e-07 60.8 27% Ornithine cyclodeaminase CSUB_C0688
HGMM_F40C01C25
Candidatus Caldiarchaeum subterraneum 4.3.1.12
8
F2LP48_BURGA
(F2LP48)
[query] 82 - 218 (325)
[subject] 78 - 213 (306)
3e-07 60.8 36% Ornithine cyclodeaminase/mu-crystallin bgla_2g24840 Burkholderia gladioli BSR3
9
D5EER8_AMICL
(D5EER8)
[query] 87 - 213 (325)
[subject] 101 - 233 (332)
9e-07 59.3 30% Ornithine cyclodeaminase Amico_0921 Aminobacterium colombiense (strain DSM 12261 / ALA-1) 4.3.1.12
10
O27539_METTH
(O27539)
[query] 82 - 209 (325)
[subject] 100 - 228 (339)
2e-06 58.2 30% Ornithine cyclodeaminase MTH_1495 Methanobacterium thermoautotrophicum (strain Delta H)
11
B1YXX0_BURA4
(B1YXX0)
[query] 89 - 218 (325)
[subject] 85 - 213 (304)
3e-06 57.4 39% Ornithine cyclodeaminase/mu-crystallin BamMC406_4650 Burkholderia ambifaria (strain MC40-6)
12
CRYM_MACFL
(Q28488)
[query] 67 - 210 (325)
[subject] 79 - 221 (314)
3e-06 57.4 26% Mu-crystallin CRYM Macropus fuliginosus
Western gray kangaroo
13
Q1AU87_RUBXD
(Q1AU87)
[query] 84 - 213 (325)
[subject] 81 - 210 (316)
3e-06 57.4 34% Ornithine cyclodeaminase Rxyl_2097 Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) 4.3.1.12
14
E6N4U1_9ARCH
(E6N4U1)
[query] 88 - 209 (325)
[subject] 95 - 217 (325)
6e-06 56.6 32% Ornithine cyclodeaminase CSUB_C0247
HGMM_F51A09C43
Candidatus Caldiarchaeum subterraneum 4.3.1.12
15
D4ZBK5_SHEVD
(D4ZBK5)
[query] 94 - 209 (325)
[subject] 98 - 215 (318)
6e-06 56.6 29% Ornithine cyclodeaminase, putative SVI_3429 Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
16
D1Y5K5_9BACT
(D1Y5K5)
[query] 97 - 318 (325)
[subject] 118 - 338 (342)
8e-06 56.2 25% Ornithine cyclodeaminase HMPREF7215_1943 Pyramidobacter piscolens W5455
17
C5QPQ7_STAEP
(C5QPQ7)
[query] 72 - 194 (325)
[subject] 74 - 197 (319)
8e-06 56.2 29% Ornithine cyclodeaminase HMPREF0793_1213 Staphylococcus epidermidis M23864:W1 4.3.1.12
18
D8JF65_ACISD
(D8JF65)
[query] 84 - 209 (325)
[subject] 87 - 211 (303)
9e-06 55.8 27% Ornithine cyclodeaminase AOLE_05170 Acinetobacter sp. (strain JCM 1667 / KCTC 23045 / DR1)
19
B9JG81_AGRRK
(B9JG81)
[query] 90 - 212 (325)
[subject] 93 - 215 (316)
1e-05 55.8 36% Ornithine cyclodeaminase protein ocdch1
Arad_0078
Agrobacterium radiobacter (strain K84 / ATCC BAA-868)
20
F2NEM8_DESAR
(F2NEM8)
[query] 83 - 209 (325)
[subject] 87 - 216 (332)
1e-05 55.8 31% Ornithine cyclodeaminase Desac_0327 Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) 4.3.1.12
21
D0S1U8_ACICA
(D0S1U8)
[query] 89 - 209 (325)
[subject] 94 - 213 (305)
1e-05 55.5 26% Ornithine cyclodeaminase HMPREF0012_00284 Acinetobacter calcoaceticus RUH2202
22
Q0FTH8_9RHOB
(Q0FTH8)
[query] 95 - 209 (325)
[subject] 105 - 219 (318)
1e-05 55.5 40% Ornithine cyclodeaminase protein R2601_26086 Pelagibaca bermudensis HTCC2601
23
C3YVE0_BRAFL
(C3YVE0)
[query] 1 - 209 (325)
[subject] 6 - 215 (308)
2e-05 54.7 28% Putative uncharacterized protein BRAFLDRAFT_276807 Branchiostoma floridae
Florida lancelet
Amphioxus
24
D5MNX0_HUMAN
(D5MNX0)
[query] 89 - 210 (325)
[subject] 61 - 179 (272)
2e-05 54.7 28% Uncharacterized protein CRYM Homo sapiens
Human
25
Q5HYB7_HUMAN
(Q5HYB7)
[query] 82 - 210 (325)
[subject] 96 - 221 (314)
2e-05 54.7 28% Crystallin, mu, isoform CRA_b
Putative uncharacterized protein DKFZp686P07163
cDNA FLJ77254, highly similar to Homo sapiens crystallin, mu (CRYM), mRNA
DKFZp686P07163
CRYM
hCG_38241
Homo sapiens
Human
26
CRYM_HUMAN
(Q14894)
[query] 82 - 210 (325)
[subject] 96 - 221 (314)
2e-05 54.7 28% Mu-crystallin homolog
NADP-regulated thyroid-hormone-binding protein
CRYM
THBP
Homo sapiens
Human
27
Q2RQD1_RHORT
(Q2RQD1)
[query] 85 - 212 (325)
[subject] 90 - 222 (320)
3e-05 54.3 35% Ornithine cyclodeaminase Rru_A2867 Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) 4.3.1.12
28
CRYM_RAT
(Q9QYU4)
[query] 84 - 210 (325)
[subject] 95 - 220 (313)
3e-05 54.3 29% Mu-crystallin homolog
CDK108
Crym Rattus norvegicus
Rat
29
Q5P2I2_AROAE
(Q5P2I2)
[query] 82 - 295 (325)
[subject] 79 - 292 (317)
4e-05 53.5 28% Ornithine cyclodeaminase, ocd
AZOSEA23570
ebA4164
Aromatoleum aromaticum (strain EbN1)
Azoarcus sp. (strain EbN1)
4.3.1.12
30
Q3A6I3_PELCD
(Q3A6I3)
[query] 82 - 210 (325)
[subject] 79 - 208 (319)
4e-05 53.5 30% Ornithine cyclodeaminase Pcar_0765 Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) 4.3.1.12
31
F6Y0U9_CALJA
(F6Y0U9)
[query] 82 - 210 (325)
[subject] 96 - 221 (314)
5e-05 53.5 27% Uncharacterized protein CRYM Callithrix jacchus
White-tufted-ear marmoset
32
B6R287_9RHOB
(B6R287)
[query] 90 - 212 (325)
[subject] 102 - 224 (320)
5e-05 53.5 34% Ornithine cyclodeaminase 1 PJE062_3011 Pseudovibrio sp. JE062 4.3.1.12
33
E5CPJ5_9STAP
(E5CPJ5)
[query] 84 - 194 (325)
[subject] 86 - 197 (318)
7e-05 53.1 28% Ornithine cyclodeaminase/mu-crystallin family protein HMPREF0786_02211 Staphylococcus caprae C87
34
D2HXQ1_AILME
(D2HXQ1)
[query] 82 - 210 (325)
[subject] 96 - 221 (294)
7e-05 52.8 28% Putative uncharacterized protein PANDA_017436 Ailuropoda melanoleuca
Giant panda
35
Q025M8_SOLUE
(Q025M8)
[query] 84 - 318 (325)
[subject] 86 - 316 (318)
7e-05 52.8 27% Ornithine cyclodeaminase Acid_2302 Solibacter usitatus (strain Ellin6076) 4.3.1.12
36
F6D7E2_9EURY
(F6D7E2)
[query] 82 - 209 (325)
[subject] 91 - 219 (330)
8e-05 52.8 29% Alanine dehydrogenase MSWAN_0036 Methanobacterium sp. SWAN-1 4.3.1.12
37
D5E7D3_METMS
(D5E7D3)
[query] 90 - 320 (325)
[subject] 97 - 325 (326)
8e-05 52.8 24% L-alanine dehydrogenase Mmah_1575 Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) 1.4.1.1

4.3.1.12
38
E9SSA5_CLOSY
(E9SSA5)
[query] 88 - 212 (325)
[subject] 119 - 246 (370)
9e-05 52.4 30% Ornithine cyclodeaminase HMPREF9475_03201 Clostridium symbiosum WAL-14673
39
E7GNK0_CLOSY
(E7GNK0)
[query] 88 - 212 (325)
[subject] 119 - 246 (370)
9e-05 52.4 30% Ornithine cyclodeaminase HMPREF9474_02495 Clostridium symbiosum WAL-14163
40
B9CRH6_STACP
(B9CRH6)
[query] 84 - 194 (325)
[subject] 86 - 197 (318)
0.0001 52.4 28% Ornithine cyclodeaminase STACA0001_0480 Staphylococcus capitis SK14
41
B7RUV4_9GAMM
(B7RUV4)
[query] 93 - 214 (325)
[subject] 108 - 230 (340)
0.0001 52.4 30% Ornithine cyclodeaminase/mu-crystallin family protein GPB2148_3574 marine gamma proteobacterium HTCC2148
42
Q0BZ13_HYPNA
(Q0BZ13)
[query] 54 - 197 (325)
[subject] 56 - 200 (319)
0.0001 52.4 33% Ornithine cyclodeaminase/mu-crystallin family protein HNE_2590 Hyphomonas neptunium (strain ATCC 15444)
43
Q47AP1_DECAR
(Q47AP1)
[query] 1 - 209 (325)
[subject] 1 - 207 (317)
0.0001 52   28% Ornithine cyclodeaminase Daro_3361 Dechloromonas aromatica (strain RCB) 4.3.1.12
44
F0JE12_DESDE
(F0JE12)
[query] 88 - 213 (325)
[subject] 98 - 229 (328)
0.0002 52   30% Ornithine cyclodeaminase DND132_0235 Desulfovibrio desulfuricans ND132 4.3.1.12
45
Q3UPX0_MOUSE
(Q3UPX0)
[query] 84 - 210 (325)
[subject] 95 - 220 (313)
0.0002 51.6 29% Crystallin, mu Crym
mCG_7593
Mus musculus
Mouse
46
CRYM_MOUSE
(O54983)
[query] 84 - 210 (325)
[subject] 95 - 220 (313)
0.0002 51.6 29% Mu-crystallin homolog Crym Mus musculus
Mouse
47
A7SZA6_NEMVE
(A7SZA6)
[query] 89 - 212 (325)
[subject] 100 - 218 (307)
0.0002 51.6 29% Predicted protein v1g194939 Nematostella vectensis
Starlet sea anemone
48
F0SS92_PLABD
(F0SS92)
[query] 90 - 209 (325)
[subject] 88 - 208 (317)
0.0003 50.8 31% Ornithine cyclodeaminase Plabr_0476 Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) 4.3.1.12
49
Q2JZB4_RHIEC
(Q2JZB4)
[query] 67 - 212 (325)
[subject] 68 - 223 (330)
0.0003 50.8 32% Ornithine cyclodeaminase protein ocdf
RHE_PF00181
Rhizobium etli (strain CFN 42 / ATCC 51251) 4.3.1.12
50
A3QH73_SHELP
(A3QH73)
[query] 73 - 209 (325)
[subject] 69 - 214 (314)
0.0005 50.1 28% Ornithine cyclodeaminase Shew_2955 Shewanella loihica (strain ATCC BAA-1088 / PV-4) 4.3.1.12
51
A9CH35_AGRT5
(A9CH35)
[query] 67 - 316 (325)
[subject] 68 - 323 (337)
0.0007 49.7 30% Ornithine cyclodeaminase arcB
Atu4758
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
52
A6E623_9RHOB
(A6E623)
[query] 93 - 320 (325)
[subject] 105 - 333 (334)
0.0008 49.3 22% Ornithine cyclodeaminase/mu-crystallin RTM1035_01040 Roseovarius sp. TM1035
53
E3CVJ3_9BACT
(E3CVJ3)
[query] 87 - 222 (325)
[subject] 95 - 236 (324)
0.0008 49.3 32% Ornithine cyclodeaminase Apau_1768 Aminomonas paucivorans DSM 12260 4.3.1.12
54
C7LRA4_DESBD
(C7LRA4)
[query] 84 - 195 (325)
[subject] 89 - 198 (319)
0.0008 49.3 34% Ornithine cyclodeaminase Dbac_1146 Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378)
Desulfovibrio baculatus
4.3.1.12
55
D3Q480_STANL
(D3Q480)
[query] 123 - 280 (325)
[subject] 123 - 277 (301)
0.0009 49.3 32% Ornithine cyclodeaminase/mu-crystallin Snas_6348 Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)
56
B9K5A7_AGRVS
(B9K5A7)
[query] 95 - 209 (325)
[subject] 114 - 228 (338)
0.001 49.3 34% Ornithine cyclodeaminase Avi_7398 Agrobacterium vitis (strain S4 / ATCC BAA-846)
Rhizobium vitis (strain S4)
accessionDBalignmentEvalueScoreIdent.linkinformationpubmed
1
Q2PZS1_9ACTO
(Q2PZS1)
[query] 1 - 325 (325)
[subject] 1 - 325 (325)
1e-176 623   100%
Product
CosY
Gene
cosY
Organism
Streptomyces olindensis
1uniprot[Pubmed] 16810496
Insights in the glycosylation steps during biosynthesis of the antitumor anthracycline cosmomycin: characterization of two glycosyltransferase genes.(Appl. Microbiol. Biotechnol.) [2006]
2
C6A254_THESM
(C6A254)
[query] 72 - 320 (325)
[subject] 75 - 325 (326)
2e-09 67.8 26%
Product
Ornithine cyclodeaminase
Gene
TSIB_0634
Organism
Thermococcus sibiricus (strain MM 739 / DSM 12597)
1uniprot[Pubmed] 19447963
Metabolic versatility and indigenous origin of the archaeon Thermococcus sibiricus, isolated from a siberian oil reservoir, as revealed by genome analysis.(Appl. Environ. Microbiol.) [2009]
4
D9PTZ2_METTM
(D9PTZ2)
[query] 82 - 209 (325)
[subject] 91 - 219 (330)
3e-08 63.9 32%
Product
Predicted alanine dehydrogenase
Gene
MTBMA_c00800
Organism
Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg)
Methanobacterium thermoautotrophicum
1uniprot[Pubmed] 20802048
Complete genome sequence of Methanothermobacter marburgensis, a methanoarchaeon model organism.(J. Bacteriol.) [2010]
6
D1CFQ2_THET1
(D1CFQ2)
[query] 1 - 320 (325)
[subject] 1 - 316 (317)
3e-07 60.8 24%
Product
Ornithine cyclodeaminase
Gene
Tter_0841
Organism
Thermobaculum terrenum (strain ATCC BAA-798 / YNP1)
1uniprot
Complete genome sequence of Thermobaculum terrenum type strain (YNP1T).(Stand. Genomic Sci.) [2010]
7
E6P9D6_9ARCH
(E6P9D6)
[query] 93 - 320 (325)
[subject] 107 - 324 (325)
3e-07 60.8 27%
Product
Ornithine cyclodeaminase
Gene
CSUB_C0688
HGMM_F40C01C25
Organism
Candidatus Caldiarchaeum subterraneum
1uniprot
Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group.(Nucleic Acids Res.) [2010]
2uniprot
Genetic and functional properties of uncultivated thermophilic crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments.(Environ. Microbiol.) [2005]
8
F2LP48_BURGA
(F2LP48)
[query] 82 - 218 (325)
[subject] 78 - 213 (306)
3e-07 60.8 36%
Product
Ornithine cyclodeaminase/mu-crystallin
Gene
bgla_2g24840
Organism
Burkholderia gladioli BSR3
1uniprot[Pubmed] 21478339
Complete Genome Sequence of Burkholderia gladioli BSR3.(J. Bacteriol.) [2011]
9
D5EER8_AMICL
(D5EER8)
[query] 87 - 213 (325)
[subject] 101 - 233 (332)
9e-07 59.3 30%
Product
Ornithine cyclodeaminase
Gene
Amico_0921
Organism
Aminobacterium colombiense (strain DSM 12261 / ALA-1)
1uniprot
Complete genome sequence of Aminobacterium colombiense type strain (ALA-1).(Stand. Genomic Sci.) [2010]
10
O27539_METTH
(O27539)
[query] 82 - 209 (325)
[subject] 100 - 228 (339)
2e-06 58.2 30%
Product
Ornithine cyclodeaminase
Gene
MTH_1495
Organism
Methanobacterium thermoautotrophicum (strain Delta H)
1uniprot[Pubmed] 9371463 [Medline] 98037514
Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics.(J. Bacteriol.) [1997]
12
CRYM_MACFL
(Q28488)
[query] 67 - 210 (325)
[subject] 79 - 221 (314)
3e-06 57.4 26%
Product
Mu-crystallin
Gene
CRYM
Organism
Macropus fuliginosus
Western gray kangaroo
1uniprot[Pubmed] 1384048 [Medline] 93028450
Mu-crystallin is a mammalian homologue of Agrobacterium ornithine cyclodeaminase and is expressed in human retina.(Proc. Natl. Acad. Sci. U.S.A.) [1992]
14
E6N4U1_9ARCH
(E6N4U1)
[query] 88 - 209 (325)
[subject] 95 - 217 (325)
6e-06 56.6 32%
Product
Ornithine cyclodeaminase
Gene
CSUB_C0247
HGMM_F51A09C43
Organism
Candidatus Caldiarchaeum subterraneum
1uniprot
Genetic and functional properties of uncultivated thermophilic crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments.(Environ. Microbiol.) [2005]
2uniprot
Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group.(Nucleic Acids Res.) [2010]
15
D4ZBK5_SHEVD
(D4ZBK5)
[query] 94 - 209 (325)
[subject] 98 - 215 (318)
6e-06 56.6 29%
Product
Ornithine cyclodeaminase, putative
Gene
SVI_3429
Organism
Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
1uniprot[Pubmed] 20458400
Complete genome sequence and comparative analysis of Shewanella violacea, a psychrophilic and piezophilic bacterium from deep sea floor sediments.(Mol. Biosyst.) [2010]
18
D8JF65_ACISD
(D8JF65)
[query] 84 - 209 (325)
[subject] 87 - 211 (303)
9e-06 55.8 27%
Product
Ornithine cyclodeaminase
Gene
AOLE_05170
Organism
Acinetobacter sp. (strain JCM 1667 / KCTC 23045 / DR1)
1uniprot[Pubmed] 20639327
Complete genome sequence of the diesel-degrading Acinetobacter sp. strain DR1.(J. Bacteriol.) [2010]
19
B9JG81_AGRRK
(B9JG81)
[query] 90 - 212 (325)
[subject] 93 - 215 (316)
1e-05 55.8 36%
Product
Ornithine cyclodeaminase protein
Gene
ocdch1
Arad_0078
Organism
Agrobacterium radiobacter (strain K84 / ATCC BAA-868)
1uniprot[Pubmed] 19251847
Genome sequences of three Agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria.(J. Bacteriol.) [2009]
22
Q0FTH8_9RHOB
(Q0FTH8)
[query] 95 - 209 (325)
[subject] 105 - 219 (318)
1e-05 55.5 40%
Product
Ornithine cyclodeaminase protein
Gene
R2601_26086
Organism
Pelagibaca bermudensis HTCC2601
1uniprot[Pubmed] 20729358
Genome sequences of Pelagibaca bermudensis HTCC2601T and Maritimibacter alkaliphilus HTCC2654T, the type strains of two marine Roseobacter genera.(J. Bacteriol.) [2010]
23
C3YVE0_BRAFL
(C3YVE0)
[query] 1 - 209 (325)
[subject] 6 - 215 (308)
2e-05 54.7 28%
Product
Putative uncharacterized protein
Gene
BRAFLDRAFT_276807
Organism
Branchiostoma floridae
Florida lancelet
Amphioxus
1uniprot[Pubmed] 18563158
The amphioxus genome and the evolution of the chordate karyotype.(Nature) [2008]
24
D5MNX0_HUMAN
(D5MNX0)
[query] 89 - 210 (325)
[subject] 61 - 179 (272)
2e-05 54.7 28%
Product
Uncharacterized protein
Gene
CRYM
Organism
Homo sapiens
Human
1uniprot[Pubmed] 15616553
The sequence and analysis of duplication-rich human chromosome 16.(Nature) [2004]
26
CRYM_HUMAN
(Q14894)
[query] 82 - 210 (325)
[subject] 96 - 221 (314)
2e-05 54.7 28%
Product
Mu-crystallin homolog
NADP-regulated thyroid-hormone-binding protein
Gene
CRYM
THBP
Organism
Homo sapiens
Human
1uniprot[Pubmed] 9285773 [Medline] 97433392
Two roles for mu-crystallin: a lens structural protein in diurnal marsupials and a possible enzyme in mammalian retinas.(Mol. Vis.) [1997]
2uniprot[Pubmed] 9328354 [Medline] 97467014
Purification, molecular cloning, and functional expression of the human nicodinamide-adenine dinucleotide phosphate-regulated thyroid hormone-binding protein.(Mol. Endocrinol.) [1997]
3uniprot[Pubmed] 10493829 [Medline] 99425270
Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q.(Genomics) [1999]
4uniprot[Pubmed] 15489334
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).(Genome Res.) [2004]
5uniprot[Pubmed] 1384048 [Medline] 93028450
Mu-crystallin is a mammalian homologue of Agrobacterium ornithine cyclodeaminase and is expressed in human retina.(Proc. Natl. Acad. Sci. U.S.A.) [1992]
6uniprot[Pubmed] 17242435
Crystal structure of human micro-crystallin complexed with NADPH.(Protein Sci.) [2007]
[pubmed all]
28
CRYM_RAT
(Q9QYU4)
[query] 84 - 210 (325)
[subject] 95 - 220 (313)
3e-05 54.3 29%
Product
Mu-crystallin homolog
CDK108
Gene
Crym
Organism
Rattus norvegicus
Rat
1uniprot[Pubmed] 15489334
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).(Genome Res.) [2004]
29
Q5P2I2_AROAE
(Q5P2I2)
[query] 82 - 295 (325)
[subject] 79 - 292 (317)
4e-05 53.5 28%
Product
Ornithine cyclodeaminase,
Gene
ocd
AZOSEA23570
ebA4164
Organism
Aromatoleum aromaticum (strain EbN1)
Azoarcus sp. (strain EbN1)
1uniprot[Pubmed] 15551059
The genome sequence of an anaerobic aromatic-degrading denitrifying bacterium, strain EbN1.(Arch. Microbiol.) [2005]
34
D2HXQ1_AILME
(D2HXQ1)
[query] 82 - 210 (325)
[subject] 96 - 221 (294)
7e-05 52.8 28%
Product
Putative uncharacterized protein
Gene
PANDA_017436
Organism
Ailuropoda melanoleuca
Giant panda
1uniprot[Pubmed] 20010809
The sequence and de novo assembly of the giant panda genome.(Nature) [2010]
35
Q025M8_SOLUE
(Q025M8)
[query] 84 - 318 (325)
[subject] 86 - 316 (318)
7e-05 52.8 27%
Product
Ornithine cyclodeaminase
Gene
Acid_2302
Organism
Solibacter usitatus (strain Ellin6076)
1uniprot[Pubmed] 19201974
Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.(Appl. Environ. Microbiol.) [2009]
42
Q0BZ13_HYPNA
(Q0BZ13)
[query] 54 - 197 (325)
[subject] 56 - 200 (319)
0.0001 52.4 33%
Product
Ornithine cyclodeaminase/mu-crystallin family protein
Gene
HNE_2590
Organism
Hyphomonas neptunium (strain ATCC 15444)
1uniprot[Pubmed] 16980487
Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus.(J. Bacteriol.) [2006]
45
Q3UPX0_MOUSE
(Q3UPX0)
[query] 84 - 210 (325)
[subject] 95 - 220 (313)
0.0002 51.6 29%
Product
Crystallin, mu
Gene
Crym
mCG_7593
Organism
Mus musculus
Mouse
1uniprot[Pubmed] 16141073
Antisense Transcription in the Mammalian Transcriptome.(Science) [2005]
2uniprot[Pubmed] 11076861 [Medline] 20530913
RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.(Genome Res.) [2000]
3uniprot[Pubmed] 12040188 [Medline] 22036378
A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome.(Science) [2002]
4uniprot
Functional annotation of a full-length mouse cDNA collection.(Nature) [2001]
5uniprot[Pubmed] 10349636 [Medline] 99279253
High-efficiency full-length cDNA cloning.(Methods Enzymol.) [1999]
6uniprot[Pubmed] 11042159 [Medline] 20499374
Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.(Genome Res.) [2000]
7uniprot
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.(Nature) [2002]
8uniprot
The Transcriptional Landscape of the Mammalian Genome.(Science) [2005]
[pubmed all]
46
CRYM_MOUSE
(O54983)
[query] 84 - 210 (325)
[subject] 95 - 220 (313)
0.0002 51.6 29%
Product
Mu-crystallin homolog
Gene
Crym
Organism
Mus musculus
Mouse
1uniprot[Pubmed] 15489334
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).(Genome Res.) [2004]
47
A7SZA6_NEMVE
(A7SZA6)
[query] 89 - 212 (325)
[subject] 100 - 218 (307)
0.0002 51.6 29%
Product
Predicted protein
Gene
v1g194939
Organism
Nematostella vectensis
Starlet sea anemone
1uniprot[Pubmed] 17615350
Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization.(Science) [2007]
49
Q2JZB4_RHIEC
(Q2JZB4)
[query] 67 - 212 (325)
[subject] 68 - 223 (330)
0.0003 50.8 32%
Product
Ornithine cyclodeaminase protein
Gene
ocdf
RHE_PF00181
Organism
Rhizobium etli (strain CFN 42 / ATCC 51251)
1uniprot[Pubmed] 16505379
The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons.(Proc. Natl. Acad. Sci. U.S.A.) [2006]
51
A9CH35_AGRT5
(A9CH35)
[query] 67 - 316 (325)
[subject] 68 - 323 (337)
0.0007 49.7 30%
Product
Ornithine cyclodeaminase
Gene
arcB
Atu4758
Organism
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
1uniprot[Pubmed] 11743193 [Medline] 21608550
The genome of the natural genetic engineer Agrobacterium tumefaciens C58.(Science) [2001]
2uniprot[Pubmed] 11743194 [Medline] 21608551
Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.(Science) [2001]
[pubmed all]
53
E3CVJ3_9BACT
(E3CVJ3)
[query] 87 - 222 (325)
[subject] 95 - 236 (324)
0.0008 49.3 32%
Product
Ornithine cyclodeaminase
Gene
Apau_1768
Organism
Aminomonas paucivorans DSM 12260
1uniprot[Pubmed] 21304733
Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3).(Stand. Genomic Sci.) [2010]
54
C7LRA4_DESBD
(C7LRA4)
[query] 84 - 195 (325)
[subject] 89 - 198 (319)
0.0008 49.3 34%
Product
Ornithine cyclodeaminase
Gene
Dbac_1146
Organism
Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378)
Desulfovibrio baculatus
1uniprot[Pubmed] 21304634
Complete genome sequence of Desulfomicrobium baculatum type strain (X).(Stand. Genomic Sci.) [2009]
55
D3Q480_STANL
(D3Q480)
[query] 123 - 280 (325)
[subject] 123 - 277 (301)
0.0009 49.3 32%
Product
Ornithine cyclodeaminase/mu-crystallin
Gene
Snas_6348
Organism
Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)
1uniprot
Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21T).(Stand. Genomic Sci.) [2009]
56
B9K5A7_AGRVS
(B9K5A7)
[query] 95 - 209 (325)
[subject] 114 - 228 (338)
0.001 49.3 34%
Product
Ornithine cyclodeaminase
Gene
Avi_7398
Organism
Agrobacterium vitis (strain S4 / ATCC BAA-846)
Rhizobium vitis (strain S4)
1uniprot[Pubmed] 19251847
Genome sequences of three Agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria.(J. Bacteriol.) [2009]