Spino_00180 : CDS information
Location
Organism | Saccharopolyspora spinosa |
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Strain | NRRL 18538 |
Entry name | Spinosyn |
Contig | AY007564 |
Start / Stop / Direction | 28,916 / 35,374 / + [in whole cluster] 28,916 / 35,374 / + [in contig] |
Location | 28916..35374 [in whole cluster] 28916..35374 [in contig] |
Type | CDS |
Length | 6,459 bp (2,152 aa) |
Annotation
Category | 1.1 PKS |
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Product | polyketide synthase |
Product (GenBank) | polyketide synthase extender module 2 |
Gene | |
Gene (GenBank) | spnB |
EC number | |
Keyword | |
Note | |
Note (GenBank) |
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Reference |
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PKS/NRPS Module
2 | malonyl-CoA |
Sequence
>polyketide synthase [polyketide synthase extender module 2] MTVTTSYEEVVEALRASLKENERLRRGRDRFSAEKDDPIAIVAMSCRYPGQVSSPEDLWQ LAAGGVDAISEVPGDRGWDLDGVFVPDSDRPGTSYACAGGFLQGVSEFDAGFFGISPREA LAMDPQQRLLLEVAWEVFERAGLEQRSTRGSRVGVFVGTNGQDYASWLRTPPPAVAGHVL TGGAAAVLSGRVAYSFGFEGPAVTVDTACSSSLVALHLAGQALRAGECDLALAGGVTVMS TPKVFLEFSRQRGLAPDGRCKSFAAGADGTGWGEGAGLLLLERLSDARRNGHEVLAVVRG SAVNQDGASNGLTAPNGSSQQRVITQALASAGLSVSDVDAVEAHGTGTRLGDPIEAQALI ATYGRDRDPGRPLWLGSVKSNIGHTQAAAGVAGVIKMVMAMRHGQLPRTLHVESPSPEVD WSAGTVQLLTENTPWPRSGRVRRVGVSSFGISGTNAHVILEQPPGVPSQSAGPGSGSVVD VPVVPWMVSGKTPEALSAQATALMTYLDERPDVSSLDVGYSLALTRSALDERAVVLGSDR ETLLCGVKALSAGHEASGLVTGSVGAGGRIGFVFSGQGGQWLGMGRGLYRAFPVFAAAFD EACAELDAHLGQEIGVREVVSGSDAQLLDRTLWAQSGLFALQVGLLKLLDSWGVRPSVVL GHSVGELAAAFAAGVVSLSGAARLVAGRARLMQALPSGGGMLAVPAGEELLWSLLADQGD RVGIAAVNAAGSVVLSGDRDVLDDLAGRLDGQGIRSRWLRVSHAFHSYRMDPMLAEFAEL ARTVDYRRCEVPIVSTLTGDLDDAGRMSGPDYWVRQVREPVRFADGVQALVEHDVATVVE LGPDGALSALIQECVAASDHAGRLSAVPAMRRNQDEAQKVMTALAHVHVRGGAVDWRSFF AGTGAKQIELPTYAFQRQRYWLVPSDSGDVTGAGLAGAEHPLLGAVVPVAGGDEVLLTGR ISVRTHPWLAEHRVLGEVIVAGTALLEIALHAGERLGCERVEELTLEAPLVLPERGAIQV QLRVGAPENSGRRPMALYSRPEGAAEHDWTRHATGRLAPGRGEAAGDLADWPAPGALPVD LDEFYRDLAELGLEYGPIFQGLKAAWRQGDEVYAEAALPGTEDSGFGVHPALLDAALHAT AVRDMDDARLPFQWEGVSLHAKAAPALRVRVVPAGDDAKSLLVCDGTGRPVISVDRLVLR SAAARRTGARRQAHQARLYRLSWPTVQLPTSAQPPSCVLLGTSEVSADIQVYPDLRSLTA ALDAGAEPPGVVIAPTPPGGGRTADVRETTRHALDLVQGWLSDQRLNESRLLLVTQGAVA VEPGEPVTDLAQAALWGLLRSTQTEHPDRFVLVDVPEPAQLLPALPGVLACGEPQLALRR GGAHAPRLAGLGSDDVLPVPDGTGWRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMR AAGVNFRDALIALGMYPGVASLGSEGAGVVVETGPGVTGLAPGDRVMGMIPKAFGPLAVA DHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLA RHLGAEVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFAD ASLRMLPRGGRFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFE GRVLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTMPPVWDAAGTVLVTGGTGALGAEV ARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI PDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDVALVLFSSVS GVLGSGGQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARS GLLPISTEEGLSQFDAACGGAHTVVAPVRFSRLSDGNAIKFSVLQGLVGPHRVNKAATAD DAESLRKRLGRLPDAEQHRILLDLVRMHVAAVLGFAGSQEITADGTFKVLGFDSLTVVEL RNRINGATGLRLPATLVFNYPTPDALAAHLVTALSADRLAGTFEELDRWAANLPTLARDE ATRAQITTRLQAILQSLADVSGGTGGGSVPDRLRSATDDELFQLLDNDLELP
>polyketide synthase [polyketide synthase extender module 2] ATGACGGTGACCACCAGTTACGAAGAAGTTGTCGAGGCACTGCGAGCATCGCTCAAGGAG AACGAACGCCTCCGGCGCGGCAGGGATCGGTTCTCCGCGGAGAAGGACGATCCCATCGCG ATCGTGGCGATGAGTTGTCGTTATCCCGGTCAGGTCTCCTCGCCGGAGGACCTGTGGCAA CTGGCTGCCGGCGGTGTGGACGCGATCTCCGAAGTTCCGGGGGATCGCGGATGGGACCTG GATGGCGTGTTCGTTCCGGACTCCGATCGTCCTGGCACGTCGTATGCCTGCGCGGGCGGT TTTCTTCAGGGCGTGTCGGAGTTCGACGCGGGTTTCTTCGGGATTTCGCCGCGTGAGGCG CTGGCGATGGATCCGCAGCAGCGGTTGCTGCTGGAAGTCGCGTGGGAGGTCTTCGAGCGG GCTGGGCTGGAGCAGCGGTCGACACGCGGTTCCCGCGTTGGCGTGTTCGTCGGCACCAAT GGCCAGGACTACGCGTCGTGGTTGCGGACGCCGCCGCCTGCGGTGGCAGGTCATGTGCTG ACGGGCGGTGCGGCAGCGGTTCTTTCGGGCCGGGTTGCGTATTCGTTCGGGTTCGAGGGT CCTGCGGTGACGGTGGATACGGCGTGTTCGTCGTCGTTGGTGGCGTTGCACCTGGCGGGG CAAGCACTGCGGGCCGGTGAGTGCGACCTTGCCCTTGCCGGTGGCGTCACGGTGATGTCG ACGCCGAAGGTGTTCCTGGAGTTCTCCCGCCAACGGGGTCTCGCGCCGGATGGGCGGTGC AAGTCGTTCGCGGCGGGTGCGGATGGCACTGGATGGGGTGAGGGTGCCGGACTGTTGTTG CTGGAGCGGTTGTCGGATGCCCGGCGGAATGGGCATGAGGTGCTGGCGGTTGTTCGTGGT AGTGCGGTGAATCAGGACGGTGCGTCGAATGGTTTGACCGCGCCGAATGGTTCGTCGCAG CAGCGGGTGATTACCCAGGCGTTGGCGAGTGCGGGGTTGTCGGTGTCCGATGTGGATGCT GTGGAGGCGCATGGGACGGGCACGCGGCTTGGTGATCCGATCGAGGCGCAGGCGCTGATC GCCACCTACGGCCGTGATCGTGATCCTGGCCGGCCGTTGTGGTTGGGGTCGGTCAAGTCG AACATCGGTCATACGCAAGCGGCGGCGGGTGTGGCTGGTGTGATCAAGATGGTGATGGCG ATGCGGCACGGGCAGCTGCCACGCACGTTGCACGTGGAATCGCCGTCGCCGGAGGTGGAT TGGTCGGCGGGGACGGTTCAACTCCTTACGGAGAACACGCCCTGGCCCAGGAGTGGTCGT GTTCGTCGGGTGGGGGTGTCGTCGTTCGGGATCAGTGGTACTAACGCGCACGTCATCCTC GAACAGCCCCCGGGAGTGCCGAGTCAGTCTGCGGGGCCGGGTTCGGGTTCTGTCGTGGAT GTTCCGGTGGTGCCGTGGATGGTGTCGGGCAAAACACCCGAAGCGCTATCCGCGCAGGCA ACGGCGTTGATGACCTATCTGGACGAGCGACCTGATGTCTCCTCGCTGGATGTTGGGTAC TCGCTGGCGTTGACACGGTCGGCGCTGGATGAGCGAGCGGTGGTGCTGGGGTCGGACCGT GAAACGTTGTTGTGCGGTGTGAAAGCGCTGTCTGCCGGTCATGAGGCTTCTGGGTTGGTG ACCGGATCTGTGGGGGCTGGGGGCCGCATCGGGTTTGTGTTTTCCGGTCAGGGTGGTCAG TGGCTGGGGATGGGCCGGGGGCTTTACCGGGCTTTTCCGGTGTTCGCTGCTGCCTTTGAC GAAGCTTGTGCCGAGCTGGATGCACATCTGGGCCAGGAAATCGGGGTTCGGGAGGTGGTG TCCGGTTCGGATGCGCAGTTGCTGGATCGGACGTTGTGGGCGCAGTCGGGTTTGTTCGCG TTGCAGGTGGGCTTGCTGAAGTTGCTGGATTCGTGGGGGGTTCGGCCGAGTGTGGTGTTG GGGCATTCGGTGGGCGAGTTGGCGGCGGCGTTCGCGGCGGGTGTGGTGTCGTTGTCGGGT GCGGCTCGGTTGGTGGCGGGTCGTGCCCGGTTGATGCAGGCGTTGCCGTCTGGCGGTGGG ATGCTGGCGGTGCCTGCTGGTGAGGAGCTGTTGTGGTCGTTGTTGGCCGATCAGGGTGAT CGTGTGGGGATCGCCGCGGTCAACGCTGCGGGGTCGGTGGTGCTCTCTGGTGATCGGGAT GTGCTCGATGACCTTGCCGGTCGGCTGGACGGGCAAGGGATCCGGTCGAGGTGGTTGCGG GTGTCGCATGCGTTTCATTCGTATCGGATGGATCCGATGCTGGCGGAGTTCGCCGAATTG GCACGAACCGTGGATTACCGGCGTTGTGAAGTGCCGATCGTGTCGACCTTGACCGGAGAC CTCGATGACGCTGGCAGGATGAGCGGGCCCGACTACTGGGTGCGTCAGGTGCGAGAGCCG GTCCGCTTCGCCGACGGTGTCCAGGCGCTGGTCGAGCACGATGTGGCCACTGTTGTCGAG CTCGGTCCGGACGGGGCGTTGTCGGCGCTGATCCAGGAATGTGTCGCCGCATCCGATCAC GCCGGGCGGCTGAGCGCGGTCCCGGCGATGCGCAGGAACCAGGACGAGGCGCAGAAGGTG ATGACGGCCCTGGCACACGTCCACGTACGTGGTGGTGCGGTGGACTGGCGGTCGTTCTTC GCCGGTACGGGAGCGAAACAAATCGAGCTGCCCACCTACGCCTTCCAACGACAGCGGTAC TGGCTGGTGCCATCGGATTCCGGTGATGTGACAGGTGCCGGTCTGGCCGGGGCGGAGCAT CCGCTGTTGGGTGCTGTGGTGCCGGTCGCGGGTGGTGACGAGGTGTTGCTGACCGGCAGG ATTTCGGTGCGGACGCATCCGTGGCTGGCCGAACACCGGGTGCTGGGTGAAGTGATCGTT GCGGGCACCGCGTTGCTGGAGATCGCCTTGCACGCGGGGGAACGTCTTGGTTGTGAACGG GTGGAAGAGCTCACCCTGGAAGCACCGCTGGTCCTGCCGGAGCGCGGGGCGATCCAGGTT CAGCTGCGAGTGGGCGCGCCCGAGAATTCCGGACGCAGGCCGATGGCGCTGTATTCACGC CCCGAAGGGGCGGCGGAGCATGACTGGACGCGGCACGCCACGGGCCGGTTGGCGCCAGGC CGCGGCGAGGCGGCTGGAGACCTGGCCGACTGGCCGGCTCCTGGCGCGCTGCCGGTCGAC CTCGACGAATTCTATCGGGACCTCGCAGAGCTTGGGCTGGAGTACGGCCCGATCTTCCAA GGGCTCAAGGCGGCCTGGCGGCAAGGGGACGAGGTGTACGCCGAAGCCGCGCTGCCGGGA ACGGAAGATTCTGGTTTCGGGGTGCATCCGGCACTGCTGGACGCGGCTCTGCACGCAACG GCTGTCCGAGACATGGATGACGCACGCTTGCCGTTCCAGTGGGAAGGTGTGTCCCTGCAC GCCAAGGCCGCGCCGGCTTTGCGGGTCCGCGTGGTCCCGGCTGGTGACGATGCCAAGTCC CTGCTGGTTTGTGATGGCACCGGTCGACCGGTGATCTCGGTGGACCGACTCGTATTGCGG TCGGCTGCGGCCCGGCGGACCGGTGCGCGCCGACAGGCCCATCAAGCTCGGTTGTACCGG TTGAGCTGGCCAACGGTTCAACTGCCGACATCCGCTCAGCCACCGTCCTGCGTGCTTCTC GGCACCTCAGAAGTGTCCGCTGACATACAGGTGTATCCGGACCTCCGGTCGTTGACGGCT GCGTTGGATGCCGGTGCCGAACCACCCGGCGTCGTCATCGCACCCACGCCCCCCGGCGGT GGACGAACAGCGGATGTCCGGGAGACGACTCGGCATGCACTCGACCTGGTACAAGGCTGG CTTTCCGATCAGCGACTCAACGAATCCCGATTGCTCCTGGTGACACAGGGAGCAGTGGCC GTGGAGCCGGGCGAACCCGTGACCGATCTGGCGCAGGCCGCGCTCTGGGGACTGCTGCGG TCGACGCAGACCGAACACCCTGATCGCTTCGTCCTCGTCGATGTGCCTGAGCCCGCGCAA CTCCTCCCCGCGCTGCCGGGGGTGCTGGCCTGCGGCGAACCTCAGCTCGCGTTGCGACGT GGCGGCGCTCATGCGCCCAGACTGGCTGGACTGGGCAGCGATGACGTCCTGCCCGTGCCG GACGGCACCGGGTGGCGATTGGAGGCCACGCGCCCGGGAAGCCTGGATGGGTTGGCATTG GTGGACGAACCGACGGCCACGGCACCGCTGGGTGACGGTGAGGTCAGGATTGCGATGCGC GCGGCCGGGGTGAACTTCCGGGATGCGCTCATCGCGCTCGGTATGTATCCCGGTGTGGCA TCGCTGGGCAGTGAGGGCGCCGGGGTCGTGGTGGAGACCGGCCCCGGCGTCACCGGCCTG GCACCCGGCGACCGCGTGATGGGAATGATCCCGAAGGCGTTCGGGCCGCTCGCGGTCGCC GACCATCGCATGGTGACGAGGATTCCCGCTGGTTGGAGCTTCGCGCGGGCCGCATCGGTG CCGATCGTCTTTCTCACCGCCTACTACGCGCTGGTTGATCTCGCCGGGTTGAGACCAGGG GAGTCGTTGCTGGTTCATTCGGCCGCCGGTGGGGTGGGGATGGCCGCGATCCAACTCGCC AGGCACCTCGGTGCAGAGGTGTACGCCACCGCTAGCGAGGACAAGTGGCAAGCCGTGGAG CTGAGCCGAGAACACCTCGCTTCGTCGCGGACGTGCGATTTCGAGCAGCAGTTCCTCGGG GCAACCGGCGGACGCGGCGTCGACGTCGTGCTCAACTCCCTCGCCGGGGAGTTCGCCGAT GCGTCTCTGCGAATGCTGCCGCGCGGTGGCCGTTTCCTGGAGTTGGGGAAGACGGATGTT CGTGACCCCGTCGAGGTCGCCGATGCGCATCCGGGCGTGTCTTACCAGGCTTTCGATACC GTAGAGGCAGGCCCGCAGCGAATCGGCGAGATGCTTCACGAGCTGGTGGAGTTGTTCGAG GGACGCGTGCTGGAGCCCCTGCCTGTCACGGCTTGGGACGTTCGGCAGGCGCCCGAGGCG CTACGGCACCTGAGCCAAGCGCGGCATGTGGGAAAGCTGGTGCTCACCATGCCTCCGGTG TGGGACGCCGCAGGCACGGTTCTGGTTACCGGCGGAACGGGAGCACTTGGCGCAGAGGTC GCCCGGCACCTCGTGATCGAGCGCGGGGTGCGAAACCTGGTCCTCGTCAGCAGGCGCGGT CCCGCAGCCAGTGGCGCTGCTGAGCTCGTGGCGCAACTGACGGCCTACGGTGCCGAGGTT TCCTTGCAGGCTTGCGATGTCGCCGATCGTGAGACCTTGGCGAAGGTGCTTGCCAGCATC CCGGACGAGCATCCGTTGACCGCCGTGGTGCACGCGGCTGGTGTTCTCGACGACGGAGTG TCCGAATCGCTCACCGTGGAGCGGCTGGACCAGGTTCTGCGCCCGAAGGTCGATGGCGCG CGGAATCTGCTCGAGCTGATCGACCCGGACGTGGCCCTCGTGTTGTTCTCGTCGGTGTCG GGTGTGCTCGGCAGCGGTGGGCAGGGTAACTACGCGGCGGCCAACTCCTTCCTCGACGCA TTGGCGCAGCAAAGGCAGTCGCGCGGCCTACCGACGAGATCATTGGCCTGGGGGCCCTGG GCGGAACATGGCATGGCCAGCACCTTGCGCGAAGCCGAGCAGGATCGATTGGCGCGATCT GGGTTGCTGCCGATCTCGACCGAGGAGGGGTTGTCCCAGTTCGACGCCGCGTGCGGCGGC GCGCATACCGTGGTGGCGCCGGTTCGATTCAGCCGCTTGTCCGACGGGAACGCGATCAAG TTCTCCGTCCTGCAAGGTTTGGTCGGGCCGCATCGCGTCAACAAAGCGGCGACTGCGGAT GATGCCGAGAGCCTCCGGAAACGGTTGGGACGCTTGCCGGATGCAGAACAACATCGGATT CTGCTGGACCTCGTCCGCATGCATGTGGCGGCAGTGCTCGGATTCGCCGGTTCTCAGGAG ATCACCGCGGACGGCACGTTCAAGGTGCTGGGCTTCGACTCGTTGACCGTGGTCGAGTTG CGCAACCGGATCAACGGGGCGACGGGGCTGCGACTGCCCGCCACCCTGGTGTTCAACTAC CCGACGCCGGATGCGCTCGCCGCGCACCTCGTCACCGCGCTGTCCGCAGACCGCCTGGCC GGGACATTCGAGGAACTCGACAGGTGGGCGGCGAACCTGCCCACGCTGGCCAGGGATGAG GCCACGCGGGCGCAGATCACCACCCGGCTACAGGCGATCTTGCAGAGCCTGGCGGACGTG TCCGGCGGAACCGGCGGCGGCTCCGTGCCGGACCGGCTCAGATCGGCCACGGACGACGAG CTTTTCCAACTCCTCGACAACGATCTCGAACTTCCCTGA
Feature
BLASTP Database:UniProtKB:2011_09 |
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InterPro Database:interpro:38.0 |
IPR001227 Acyl transferase domain (Domain)
IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site (Conserved_site)
IPR009081 Acyl carrier protein-like (Domain)
IPR011032 GroES-like (Domain)
IPR013149 Alcohol dehydrogenase, C-terminal (Domain)
IPR013154 Alcohol dehydrogenase GroES-like (Domain)
IPR013968 Polyketide synthase, KR (Domain)
IPR014030 Beta-ketoacyl synthase, N-terminal (Domain)
IPR014031 Beta-ketoacyl synthase, C-terminal (Domain)
IPR014043 Acyl transferase (Domain)
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase (Domain)
IPR016036 Malonyl-CoA ACP transacylase, ACP-binding (Domain)
IPR016038 Thiolase-like, subgroup (Domain)
IPR016039 Thiolase-like (Domain)
IPR016040 NAD(P)-binding domain (Domain)
IPR018201 Beta-ketoacyl synthase, active site (Active_site)
IPR020801 Polyketide synthase, acyl transferase domain (Domain)
IPR020806 Polyketide synthase, phosphopantetheine-binding domain (Domain)
IPR020807 Polyketide synthase, dehydratase domain (Domain)
IPR020841 Polyketide synthase, beta-ketoacyl synthase domain (Domain)
IPR020842 Polyketide synthase/Fatty acid synthase, KR (Domain)
IPR020843 Polyketide synthase, enoylreductase (Domain)
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SignalP | No significant hit |
TMHMM | No significant hit |