Stigm_00080 : CDS information

Location

Organism	Stigmatella aurantiaca
Strain	Sga15
Entry name	Stigmatellin
Contig	AJ421825
Start / Stop / Direction	13,974 / 12,082 / - [in whole cluster] 13,974 / 12,082 / - [in contig]
Location	complement(12082..13974) [in whole cluster] complement(12082..13974) [in contig]
Type	CDS
Length	1,893 bp (630 aa)

Annotation

Category	5.1 general function
Product	putative glycosidase
Product (GenBank)	cellulase
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	ORF1
Reference	ACC Q8RJY7 PmId [11809757] The biosynthesis of the aromatic myxobacterial electron transport inhibitor stigmatellin is directed by a novel type of modular polyketide synthase. (J Biol Chem. , 2002) comment S. aurantiacaにおいてstigmatellin形成を担う遺伝子セットの報告。 ORF1はPaenibacillus polymyxaのcellulase(P23548)に似ている。
Family/Domain	FD IPR001547 comment [IPR001547] Glycoside hydrolase, family 5 (Domain) function; hydrolase activity, hydrolyzing O-glycosyl compounds

Sequence

>putative glycosidase [cellulase]
MKNSLLLLMLAVLPLYGTAALARPGMANAEPGHFEGPENAGLTAAQCNPRVPLSTRGRYI
VDRCGERFKLKSVNWFGASDQLEVVGGLDKQKLSDLVAGMKAMGFNSVRLPFSNNMLHPD
DNKPAAQRCLEKYSVTCIDSTKNPELLNKTALEVYDAVVAELTRQGLVVILNNHTTKSMW
CCGWDGNGFWDSSQALQRWQDDWVMLAARYQGNKWVAGADLRNEVRPDGLDSPNWGMRNQ
HDWHMAAQTMGNLLLRTNPDLLIVVEAVNWWGLLDGSRPQLKPVRQRPVALLRGDKLVYA
VHNYGYTGPNQSGGSLGSGPKYSDMDKPTLYGTLDQEWGFALAANQAYTAPVWMSEFGVG
YNEQAANSRAWFSNLADYLIEKDVDWAYWAINAAKLQNSVQGEDETYGLWSYPDWNGVRS
GDWRLGTGPLGRLLGADGRTGAVDATRFLPMTVLLKDGSSTYYVDNNSLDSDWHSGKAKI
SCPRGYRMVGVSANFTILCTNAGAVPAQQGTGSYQTITQEVSPLRYPGDWANQSIKFECP
TGFYAVGISTANPFFLELAGLLCEQNTGGIPLNSKSAKNFWGGDQRASSSGGDWSVSQYK
GQCADNQYLIGLAHRRSGLADYPSVVLCSN

>putative glycosidase [cellulase]
ATGAAGAACAGTCTTCTGCTGTTGATGTTGGCGGTGCTCCCCTTGTACGGCACAGCCGCC
CTGGCCCGGCCCGGCATGGCCAACGCCGAGCCAGGCCACTTCGAAGGCCCCGAGAATGCC
GGGCTGACCGCGGCACAGTGCAACCCGCGCGTTCCGCTGAGCACCCGGGGCCGGTACATC
GTCGACCGCTGTGGAGAGCGCTTCAAGCTGAAGTCCGTCAACTGGTTCGGCGCGAGCGAC
CAGCTCGAGGTGGTGGGAGGCCTGGACAAGCAGAAGCTGTCGGACCTCGTCGCAGGAATG
AAGGCGATGGGCTTCAACTCCGTCCGGCTGCCGTTCTCCAACAACATGCTGCACCCGGAC
GACAACAAGCCCGCAGCGCAGCGGTGTCTTGAGAAGTACAGCGTCACATGTATCGACTCC
ACGAAGAACCCGGAGCTGCTGAACAAGACAGCGCTCGAGGTCTACGACGCTGTCGTGGCA
GAGCTGACGCGACAGGGATTGGTGGTCATCCTGAACAACCACACGACGAAGTCCATGTGG
TGCTGCGGCTGGGATGGCAATGGCTTCTGGGACAGCAGCCAGGCCCTGCAGCGGTGGCAG
GACGACTGGGTGATGCTGGCAGCGCGCTACCAGGGCAACAAGTGGGTGGCCGGGGCCGAC
CTGCGCAACGAGGTGCGTCCGGACGGACTGGACAGTCCCAACTGGGGGATGCGCAACCAG
CATGACTGGCACATGGCGGCCCAGACGATGGGCAACCTGCTGCTGCGGACGAACCCGGAC
CTGCTCATCGTCGTCGAGGCAGTCAACTGGTGGGGACTCCTGGACGGATCGCGCCCGCAG
CTGAAGCCCGTGAGGCAGCGGCCCGTCGCCCTGTTGCGCGGAGACAAGCTCGTCTACGCC
GTGCACAACTATGGCTACACCGGGCCGAATCAGTCGGGAGGCTCGCTGGGCAGCGGCCCG
AAGTACAGCGACATGGACAAGCCAACGCTCTACGGCACTCTGGACCAGGAGTGGGGCTTC
GCACTCGCGGCGAATCAGGCGTACACCGCGCCGGTCTGGATGAGCGAGTTCGGCGTCGGC
TACAACGAGCAGGCGGCCAACTCCCGGGCGTGGTTCAGCAACCTCGCGGACTACCTCATC
GAGAAGGACGTCGACTGGGCCTACTGGGCCATCAACGCGGCGAAGTTGCAGAACTCGGTG
CAGGGGGAGGACGAAACCTACGGCCTGTGGAGCTACCCGGACTGGAATGGCGTGCGCAGC
GGTGACTGGCGGCTCGGGACGGGCCCCTTGGGCCGACTGCTCGGAGCGGACGGGCGAACA
GGCGCCGTGGATGCGACGCGCTTCCTACCGATGACCGTCCTCCTGAAGGACGGGAGCTCC
ACCTACTATGTGGACAACAACTCGTTGGACTCCGACTGGCACTCGGGCAAAGCAAAGATC
AGCTGTCCGAGGGGCTATCGCATGGTGGGGGTGAGCGCGAACTTCACCATCCTCTGTACC
AACGCGGGAGCTGTTCCCGCTCAGCAGGGCACGGGGAGCTACCAGACAATCACCCAGGAG
GTCTCTCCGCTGCGCTACCCGGGTGACTGGGCCAACCAGAGCATCAAGTTCGAGTGCCCC
ACGGGCTTCTACGCGGTGGGCATCTCCACGGCGAACCCGTTCTTCCTCGAGCTGGCGGGT
CTGCTCTGCGAGCAGAACACCGGTGGCATTCCTCTCAACAGCAAGTCGGCGAAGAACTTC
TGGGGAGGAGACCAGCGCGCATCCTCCTCGGGAGGCGACTGGAGCGTGAGCCAGTACAAG
GGGCAGTGTGCCGACAACCAATACCTCATCGGATTGGCGCATCGCCGGAGCGGGCTCGCG
GACTACCCGTCGGTGGTGCTCTGCTCCAACTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR001547 Glycoside hydrolase, family 5 (Domain) PF00150 Cellulase IPR013781 Glycoside hydrolase, catalytic domain (Domain) G3DSA:3.20.20.80 Glyco_hydro_cat IPR017853 Glycoside hydrolase, superfamily (Domain) SSF51445 Glyco_hydro_cat
SignalP	Eukaryota Bacteria, Gram-negative Bacteria, Gram-positive
TMHMM	No significant hit

Stigm_00070 Stigm_00090