Aran_00180 : CDS information

Location

Organism	Streptomyces echinatus
Strain	Tü303
Entry name	Aranciamycin
Contig	DQ915964
Start / Stop / Direction	25,870 / 22,835 / - [in whole cluster] 25,870 / 22,835 / - [in contig]
Location	complement(22835..25870) [in whole cluster] complement(22835..25870) [in contig]
Type	CDS
Length	3,036 bp (1,011 aa)

Annotation

Category	5.2 function unknown
Product	SNF2 family protein
Product (GenBank)	helicase
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	orf18
Reference	ACC A1C185 PmId [17357167] Cloning and heterologous expression of the aranciamycin biosynthetic gene cluster revealed a new flexible glycosyltransferase. (Chembiochem. , 2007) comment aranciamycin生合成gene cluster(ara-cluster)のクローニングとシークエンス報告。 ORF18(1011aa): helicase 配列解析。詳細記載なし。 closest homologue = helicase from Mycobacterium bovis
Family/Domain	FD IPR022138, IPR000330, IPR001650 comment [IPR022138] Helicase SWF/SNF-related (Family) [IPR000330] SNF2-related (Domain) [IPR001650] DNA/RNA helicase, C-terminal (Domain)

Sequence

>SNF2 family protein [helicase]
MPGRGRMAFWGTPDPATDAKGAGLSDGTSEVASLPTVVPGGGRLVRAEMPALLVPLGEVL
RALAGLPPAAVDADDGGGGAPGSQGNVRLDRSVYAWSVAARWALEHVVAGHAVPLLRAGP
DGRHLAHWHVDPVGDPRLDALAEALPAAAHALRVDTGVTLDAAITVDAEPAGARLWSAQA
LLEAFCDAVADLCVRASASAPDPAAEPAEPARRLRGRTEGSGASRPPGTADASPATWSRA
WLGALAGERAEVVHERLPAVDDVERWAAAASGERVPARLCLRLGLPAGPDSPWPLDFHLQ
AADEPGLLLPAQRVWRSHASAIPLGSRLLDNPQETLTASLGVAARWFRPLAACLGEARPV
QVRLTPFDAAALFGDAGNDLRNAGIGVVVPRELEDGARVLGPRLRVGSRRGGRRTDVTDT
AGARHRTVTYRWEAVVGDEVLTSEEVTELAARGEPFALWRDVWVRVDTERVAELASLVGR
TGRLSAAEALSVALCGRHRTEEFGDVPALAEGSVADLVSRLRSALADEEPRLAGVRAELR
DYQRRGIAWLQSLTELGFGALLADDMGLGKTLQTIALLAGRPRQRPQLVVCPTSVVSNWH
REAARFAPDLTVRLHHGPRRATRPEEFAPGTVHVTSYALLRLDADLLTSVDWDLVVLDEA
QQIKNHTAQTARAAFRLTSHARVALTGTPVENRLSELWSIMHFANPGLLGSHRRFKEQVA
VPVERDGDQESADRLRTVTAPFMLRRMKSAVVDELPAKLESTVSCDLTAEQTRLYRAALD
EAFDTDDGLGSGIQRQGNVLRLLTRLKQICNHPAQFLGEEDTDAGRLAGRSGKLERATEM
LGEVVASGERALVFTQYRVMGDLLARHLSGELGLARVPFLHGGTPTEHRDRMVRAFQEDD
DAPPLLLISLKAGGFGLNLTRASHVMHYDRWWNPAVEDQATDRAHRIGQTKTVLVHKLVT
ADTFEERIDALLQSKRSLADAVVGAGETWLTELDDDALHALVRLADSGDTA

>SNF2 family protein [helicase]
ATGCCCGGACGGGGGCGTATGGCTTTCTGGGGGACGCCCGACCCGGCGACGGACGCGAAG
GGTGCGGGCCTGAGCGACGGCACGTCCGAGGTCGCCTCGCTGCCCACGGTGGTGCCCGGC
GGCGGCCGTCTGGTCCGGGCGGAGATGCCCGCGCTGCTGGTGCCGCTGGGCGAGGTGCTG
CGCGCGCTGGCCGGTCTGCCACCGGCGGCCGTCGACGCCGACGACGGTGGCGGTGGTGCC
CCGGGTTCGCAGGGGAACGTCCGGCTCGACCGGTCGGTGTACGCCTGGTCCGTCGCCGCC
CGCTGGGCGCTGGAGCACGTCGTCGCCGGGCACGCCGTACCCCTGCTGCGTGCCGGGCCG
GACGGCCGGCACCTGGCGCACTGGCACGTCGACCCCGTCGGCGACCCCCGCCTGGACGCG
CTCGCCGAGGCCCTGCCGGCCGCCGCGCACGCCCTGCGTGTGGACACCGGGGTCACCCTG
GACGCTGCGATCACCGTGGACGCGGAACCCGCCGGAGCCCGGCTCTGGTCGGCGCAGGCC
CTGCTGGAGGCGTTCTGCGACGCGGTGGCCGACCTGTGCGTCCGTGCGTCCGCCTCGGCC
CCGGACCCGGCCGCGGAGCCGGCCGAACCCGCCCGACGGCTCCGTGGACGCACGGAAGGA
TCCGGCGCGTCCCGGCCTCCCGGAACGGCCGACGCCTCCCCCGCGACCTGGTCGCGGGCC
TGGCTCGGCGCGCTGGCCGGGGAACGGGCCGAGGTGGTGCACGAGCGGCTGCCCGCCGTG
GACGACGTGGAGCGCTGGGCGGCGGCGGCATCGGGTGAGCGCGTTCCGGCCCGGCTGTGC
CTGCGGCTGGGGCTGCCCGCCGGGCCCGACTCGCCCTGGCCGCTGGACTTCCATCTCCAG
GCGGCGGACGAGCCCGGTCTGCTGCTGCCCGCGCAGCGGGTGTGGCGCAGCCACGCCTCC
GCGATCCCGCTCGGCAGCCGCCTCCTGGACAACCCGCAGGAGACGCTGACCGCCTCGCTC
GGCGTGGCCGCGCGCTGGTTCCGGCCCCTCGCGGCCTGCCTGGGCGAGGCCCGGCCCGTC
CAGGTACGCCTCACTCCGTTCGATGCCGCGGCCCTCTTCGGCGACGCGGGCAACGACCTG
CGCAACGCGGGCATCGGGGTGGTGGTCCCGCGGGAGCTGGAGGACGGTGCCCGGGTGCTC
GGGCCGCGGCTGCGGGTCGGATCCCGGCGCGGCGGCCGGCGGACCGATGTGACGGACACC
GCCGGGGCCCGGCACCGGACCGTCACCTACCGCTGGGAGGCGGTGGTGGGCGACGAGGTC
CTCACCTCGGAGGAGGTGACCGAACTGGCAGCGCGCGGTGAGCCGTTCGCCCTGTGGCGC
GATGTCTGGGTACGCGTCGACACCGAGCGTGTGGCCGAACTCGCCTCCCTGGTGGGGCGG
ACCGGGCGGCTGTCCGCCGCGGAGGCCCTGTCGGTAGCGCTGTGCGGACGCCACCGTACG
GAGGAGTTCGGCGACGTCCCCGCCCTGGCCGAGGGGTCGGTCGCCGACCTGGTGAGCCGG
CTGCGTTCGGCCCTCGCCGACGAGGAGCCCCGACTCGCGGGTGTGCGCGCCGAGTTGCGC
GACTACCAGCGCCGGGGCATCGCCTGGCTCCAGTCGCTGACCGAGCTGGGCTTCGGCGCC
CTGCTCGCCGACGACATGGGTCTGGGCAAGACGCTCCAGACCATCGCCCTGCTGGCCGGC
CGGCCCCGGCAGCGGCCGCAGCTCGTGGTCTGCCCGACCTCCGTGGTGAGCAACTGGCAC
CGTGAGGCCGCGCGGTTCGCGCCGGACCTGACCGTTCGGCTGCACCATGGGCCGCGCCGG
GCCACCCGTCCCGAGGAGTTCGCCCCCGGGACCGTCCATGTGACCAGCTACGCGCTGCTG
CGCCTGGACGCCGATCTGCTGACCTCCGTCGACTGGGACCTGGTCGTCCTCGACGAGGCC
CAGCAGATCAAGAACCACACCGCGCAGACCGCGCGTGCCGCGTTCCGGCTGACCTCGCAC
GCCAGGGTGGCGCTGACCGGCACCCCCGTGGAGAACCGGCTGTCGGAGCTGTGGTCGATC
ATGCACTTCGCCAACCCTGGCCTGCTCGGCTCGCACCGCCGCTTCAAGGAGCAGGTCGCC
GTCCCCGTCGAACGGGACGGCGACCAGGAGTCCGCGGACCGGCTGCGTACCGTCACGGCG
CCCTTCATGCTGCGCCGGATGAAGAGCGCCGTCGTCGACGAGCTGCCCGCCAAGCTGGAG
TCCACGGTCTCCTGCGACCTGACCGCGGAGCAGACCAGGCTGTACCGGGCCGCCCTGGAC
GAGGCGTTCGACACGGACGACGGACTGGGCAGCGGCATCCAGCGGCAGGGCAACGTGCTG
CGGCTGCTCACCCGGCTCAAGCAGATCTGCAACCACCCGGCCCAGTTCCTGGGCGAGGAG
GACACCGACGCCGGGCGGCTCGCCGGGCGCTCGGGCAAGCTGGAGCGGGCCACCGAGATG
CTCGGCGAGGTCGTGGCGTCCGGTGAACGGGCGCTGGTGTTCACCCAGTACCGGGTGATG
GGCGATCTGCTGGCCCGTCATCTGTCGGGCGAGCTCGGCCTGGCGCGGGTGCCGTTCCTG
CACGGCGGGACACCGACGGAACACCGGGACCGGATGGTACGCGCGTTCCAGGAGGACGAC
GACGCTCCGCCGCTGCTGCTGATCAGCCTCAAGGCGGGCGGCTTCGGCCTGAACCTGACC
CGCGCCTCGCACGTGATGCACTACGACCGGTGGTGGAACCCGGCCGTCGAGGACCAGGCC
ACGGACCGCGCGCACCGGATCGGTCAGACCAAGACCGTCCTGGTGCACAAGCTGGTCACC
GCCGACACCTTCGAGGAGCGCATCGACGCCCTGCTGCAGAGCAAGCGTTCGCTGGCCGAC
GCCGTCGTCGGCGCCGGAGAGACCTGGCTGACCGAGCTGGACGACGACGCGCTGCACGCG
CTGGTCCGGCTCGCCGACTCGGGAGACACCGCATGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR000330 SNF2-related (Domain) PF00176 SNF2_N IPR001650 Helicase, C-terminal (Domain) SM00490 HELICc PS51194 HELICASE_CTER PF00271 Helicase_C IPR014001 Helicase, superfamily 1/2, ATP-binding domain (Domain) PS51192 HELICASE_ATP_BIND_1 SM00487 DEXDc IPR022138 Helicase SWF/SNF-related (Family) PF12419 DUF3670
SignalP	No significant hit
TMHMM	No significant hit

Aran_00170 Aran_00190