Fred_00220 : CDS information

Location

Organism	Streptomyces griseus
Strain	ATCC 49344
Entry name	Fredericamycin
Contig	AF525490
Start / Stop / Direction	19,153 / 18,122 / - [in whole cluster] 19,153 / 18,122 / - [in contig]
Location	complement(18122..19153) [in whole cluster] complement(18122..19153) [in contig]
Type	CDS
Length	1,032 bp (343 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	putative membrane transporter
Gene	fdmT1
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	FdmT1
Reference	ACC Q2MGB7 PmId [16305230] Cloning, sequencing, analysis, and heterologous expression of the fredericamycin biosynthetic gene cluster from Streptomyces griseus. (J Am Chem Soc. , 2005) comment Fredericamycin(FDM) gene clusterの同定論文。 fdmT1: transporter(putative membrane transporter protein) RUB-ORF3, SCM2.02cに似ている。 fdmC-fdmT3(fdmT1を含む)のfragmentをS.albusへ導入し、FDM-A産生に十分であることを確認している。

Sequence

>hypothetical protein [putative membrane transporter]
MSTTDQAERPPAPGTRSDHRGPAAGSAPPPGPPGGVRWAYAMVIVATLAAIASNVFEIAD
QIETGVAGAATTGDLVLTIAFCALFGFFAEMLRAGRQWGRVLLTVFTSLGIVFTGLGLAG
LGGRPLVGALQGSLAVISLVTSVVGLVLLFLPSVNRWMSAVRRQSRTVPQRLRKIVLTAH
VAISVGWLGLVTGMFAMSVSGATTGSAEQQAAMYRTMSMLDEIFLGMTSMFALITGIVVG
AGTKWGLLQRRWVAVKFFLTMGVMILGFGVIHQLILRANELVDAGAPVRGGELDTVGWSM
AGSAALAVVSLVFMTAVSTYKPWGPTRWGKKARPGAAASRTDR

>hypothetical protein [putative membrane transporter]
GTGAGTACGACAGACCAGGCGGAGAGGCCGCCCGCACCGGGAACAAGGTCCGACCACCGT
GGGCCCGCCGCCGGGTCGGCGCCGCCCCCTGGACCACCGGGCGGCGTCCGCTGGGCCTAC
GCCATGGTGATCGTGGCCACGCTCGCGGCCATCGCCAGCAACGTCTTCGAGATCGCCGAC
CAGATCGAGACCGGGGTGGCCGGTGCCGCCACGACCGGGGACCTCGTCCTGACCATCGCG
TTCTGCGCGCTGTTCGGATTCTTCGCCGAGATGCTCAGGGCCGGCCGCCAGTGGGGGCGG
GTGCTGCTGACGGTCTTCACCTCGCTGGGCATCGTCTTCACCGGTCTGGGCCTGGCCGGG
CTGGGCGGGCGGCCCCTGGTGGGCGCACTGCAGGGTTCCCTGGCCGTGATCAGCCTCGTG
ACCTCCGTGGTCGGCCTGGTGCTGCTCTTCCTGCCGTCCGTCAACCGTTGGATGAGCGCC
GTGCGCCGGCAGAGCCGCACCGTCCCGCAGCGGCTGCGCAAGATCGTCCTCACCGCCCAC
GTGGCGATCTCGGTGGGCTGGCTGGGGCTGGTGACCGGCATGTTCGCCATGTCGGTCTCG
GGCGCCACCACGGGCAGCGCCGAGCAGCAGGCCGCGATGTACCGCACCATGTCGATGCTA
GACGAGATCTTTCTCGGCATGACCAGCATGTTCGCCCTCATCACCGGCATCGTGGTCGGG
GCGGGGACCAAGTGGGGACTGCTCCAGCGCCGTTGGGTGGCCGTGAAGTTCTTCCTCACC
ATGGGCGTGATGATCCTCGGGTTCGGCGTCATCCACCAGCTCATCCTGCGCGCCAATGAA
CTCGTCGACGCCGGAGCCCCGGTGCGCGGGGGCGAACTCGACACCGTGGGCTGGTCGATG
GCCGGATCGGCCGCCCTGGCCGTGGTCTCCCTGGTGTTCATGACCGCCGTCTCCACGTAC
AAGCCCTGGGGCCCGACCCGCTGGGGGAAGAAGGCGCGCCCGGGCGCTGCCGCGTCCCGG
ACGGACCGCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro	No significant hit
SignalP	Eukaryota
TMHMM	Transmembrane 8

Fred_00210 Fred_00230