Fren_00180 Fren_00180   Fren_00200 Fren_00200

Fren_00190 : CDS information

close this sectionLocation

Organism
StrainAK24158
Entry nameFrenolicin
Contig
Start / Stop / Direction21,834 / 20,917 / - [in whole cluster]
21,834 / 20,917 / - [in contig]
Locationcomplement(20917..21834) [in whole cluster]
complement(20917..21834) [in contig]
TypeCDS
Length918 bp (305 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)FrnS
Gene
Gene (GenBank)frnS
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
comment
"Analysis of a 27 kb region of Streptomyces roseofulvus containing genes for frenolicin biosynthesis."

論文として報告があるのは10.2kbp領域のみ[PMID:8181754]。
このORFはその範囲外でGenBank登録AF058302に由来する。

close this sectionSequence

selected fasta
>hypothetical protein [FrnS]
MTGRVTGTMAGPLPGTVLVAGASGAVGGRLVSRLLDSGVPVRALVRSAARGRALAAVGAE
TVVGDLADTASLAAALHGVERAFLLLQDEAGAPFARAAAKARGLREVVVLSATAAAHPEY
DNPMFQKHVRGERHVRGSGVPWVFLRPGAFASLALLWAPALHGDGVVRVPHAGLAVPLID
PRDIADVAAAVLTAPVERWAGKAVPLSGPEVLTLPGRTAVLAAELGRPLRVEPVPEEEWV
QLTARHIPEPYARALAGVERFFTEHPPAVSPGVTDVTGRPARSFATWVRDHAASFAPGPP
TVVGG
selected fasta
>hypothetical protein [FrnS]
GTGACGGGAAGGGTGACGGGAACGATGGCGGGACCACTGCCGGGAACAGTGCTGGTGGCC
GGGGCGAGCGGCGCGGTCGGGGGGCGCCTCGTGTCCCGGCTGCTCGACTCCGGGGTGCCG
GTGCGCGCCCTGGTGCGCTCGGCCGCGCGCGGGCGGGCGCTCGCCGCGGTCGGCGCCGAG
ACGGTCGTCGGGGACCTGGCGGACACGGCTTCGCTCGCGGCGGCGCTGCACGGCGTGGAG
CGGGCGTTCCTGCTGCTCCAGGACGAGGCCGGCGCGCCCTTCGCGCGGGCGGCGGCGAAG
GCGCGGGGGCTGCGCGAGGTGGTGGTGCTCTCCGCGACGGCGGCGGCTCACCCGGAGTAC
GACAACCCGATGTTCCAGAAGCACGTCCGCGGCGAGCGGCACGTGCGCGGGAGCGGGGTG
CCCTGGGTGTTCCTGCGTCCGGGCGCCTTCGCCTCGCTCGCGCTGCTGTGGGCGCCCGCG
CTCCACGGGGACGGTGTGGTGCGGGTCCCGCACGCCGGGCTCGCGGTGCCGCTGATCGAC
CCGCGGGACATCGCCGACGTGGCCGCCGCGGTTCTCACGGCGCCCGTGGAGCGGTGGGCC
GGAAAGGCGGTGCCGCTCTCGGGTCCCGAGGTGCTGACGCTGCCCGGGCGGACCGCCGTG
CTCGCCGCGGAACTGGGCCGCCCGCTGCGCGTGGAGCCGGTGCCGGAGGAGGAGTGGGTG
CAGCTGACGGCCCGGCACATCCCCGAGCCGTACGCGCGGGCGCTCGCGGGCGTCGAGCGG
TTCTTCACGGAGCACCCACCGGCCGTGAGCCCGGGTGTCACCGACGTGACCGGTCGGCCC
GCGCGGTCCTTCGCCACTTGGGTGCGCGACCACGCGGCGAGCTTCGCGCCCGGACCGCCC
ACCGTGGTCGGCGGGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR016040 NAD(P)-binding domain (Domain)
[16-213] 1e-36 G3DSA:3.40.50.720
G3DSA:3.40.50.720   NAD(P)-bd
SignalP
[1-19] 0.744 Signal
Bacteria, Gram-negative   
[1-24] 0.936 Signal
Bacteria, Gram-positive   
[1-24] 0.92 Signal
Eukaryota   
TMHMM No significant hit
Fren_00180 Fren_00180   Fren_00200 Fren_00200
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