Naphcy_00020 : CDS information
Location
Organism | Streptomyces arenae |
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Strain | DSM 40737 |
Entry name | Naphthocyclinone |
Contig | AF098965 |
Start / Stop / Direction | 11,343 / 10,054 / - [in whole cluster] 2,698 / 3,987 / + [in contig] |
Location | complement(10054..11343) [in whole cluster] 2698..3987 [in contig] |
Type | CDS |
Length | 1,290 bp (429 aa) |
Annotation
Category | 1.1 PKS |
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Product | polyketide synthase chain length factor subunit |
Product (GenBank) | chain length factor |
Gene | |
Gene (GenBank) | ncnB |
EC number | |
Keyword |
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Note | |
Note (GenBank) | |
Reference |
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PKS/NRPS Module
Sequence
>polyketide synthase chain length factor subunit [chain length factor]
MNSGTRSGTSSATRNGTSSGAAGAGAVVVTGVSVVAPGGLGTEEYWKSVLTGRSGIGELT
RFDVTRYPARLAGQIRDFEAADHLPSRSLPQTDVSTCHALAAAAWALADAGVGAGTLPDY
DMGVVTSTSQGGFEFTHREFNKLWSKGPQHVSVYESFAWFYAVNTGQISIRHGMRGPSAA
LVAEQAGGLDAVGHARRTVRRGTRLVLSGGVDSAFDPWGWVAQSASGRVTTATDPERAYL
PFDTDASGHVPAEGGAILVVEDAASARLRGAERIYGTLAGYASTFDPRPGSGRPPGLRRA
AELALADAGLAPGDIDVVFADAAGVPELDRAEAAAISGLFGPNAVPVTAPKSVTGRMYAG
GGPADLVAALLAVRDGVVPATAHTTSVPAGYGIDLVLGEPRALPVRAALVLARGRWGFNS
AVVVTGPTH
>polyketide synthase chain length factor subunit [chain length factor]
ATGAACAGCGGTACGAGGAGCGGTACGAGCAGCGCTACGAGGAACGGTACGAGCAGCGGC
GCGGCCGGTGCCGGTGCCGTGGTCGTCACCGGTGTCTCGGTGGTGGCGCCGGGCGGTCTG
GGGACCGAGGAGTACTGGAAGTCCGTGCTCACCGGGCGCAGCGGCATCGGGGAGCTCACC
CGGTTCGACGTCACGCGCTACCCGGCCCGGCTCGCCGGGCAGATCAGGGACTTCGAGGCG
GCCGACCACCTGCCCAGCCGGTCGCTGCCGCAGACGGACGTCTCGACCTGCCACGCGCTG
GCCGCCGCGGCCTGGGCGCTGGCCGACGCCGGGGTGGGCGCCGGGACACTGCCCGACTAC
GACATGGGCGTGGTCACCTCCACCTCGCAGGGCGGGTTCGAGTTCACCCACCGGGAGTTC
AACAAGCTCTGGAGCAAGGGCCCGCAGCACGTCAGCGTCTACGAGTCGTTCGCCTGGTTC
TACGCCGTGAACACCGGGCAGATCTCCATCCGGCACGGCATGCGCGGCCCGAGCGCCGCG
CTCGTCGCGGAGCAGGCGGGCGGCCTGGACGCGGTGGGGCACGCCCGCCGTACCGTGCGC
CGGGGCACCCGGCTGGTGCTGAGCGGCGGGGTGGACTCCGCGTTCGATCCGTGGGGCTGG
GTGGCGCAGTCGGCGAGCGGCCGGGTCACCACGGCGACCGACCCGGAGCGCGCGTACCTG
CCCTTCGACACCGACGCGTCCGGGCACGTGCCCGCCGAGGGCGGCGCGATCCTGGTCGTC
GAGGACGCCGCCTCGGCCCGGCTGCGCGGCGCGGAGCGGATCTACGGGACGCTCGCCGGA
TACGCGTCCACCTTCGACCCGCGGCCCGGTTCGGGACGCCCGCCAGGCCTGCGCCGCGCG
GCCGAACTGGCGCTGGCCGACGCGGGGTTGGCGCCTGGCGACATCGACGTGGTGTTCGCC
GACGCGGCCGGCGTGCCGGAACTCGACCGGGCCGAGGCGGCGGCCATCAGCGGCCTGTTC
GGGCCGAACGCCGTCCCGGTGACCGCGCCCAAGTCCGTCACCGGCCGGATGTACGCGGGC
GGCGGTCCGGCCGACCTGGTCGCCGCGCTGCTCGCCGTCCGGGACGGCGTGGTCCCGGCG
ACCGCGCACACCACGTCGGTGCCCGCCGGCTACGGCATCGACCTCGTCCTCGGGGAACCC
CGCGCCCTGCCCGTACGGGCCGCGCTGGTGCTCGCCCGCGGACGCTGGGGCTTCAACTCG
GCGGTCGTCGTGACCGGTCCGACGCACTGA
Feature
BLASTP Database:UniProtKB:2011_09 |
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InterPro Database:interpro:38.0 |
IPR014030 Beta-ketoacyl synthase, N-terminal (Domain)
IPR014031 Beta-ketoacyl synthase, C-terminal (Domain)
IPR016038 Thiolase-like, subgroup (Domain)
IPR016039 Thiolase-like (Domain)
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SignalP | |
TMHMM | No significant hit |