C1027_00030 C1027_00030   C1027_00050 C1027_00050

C1027_00040 : CDS information

close this sectionLocation

Organism
StrainC-1027
Entry nameC-1027
Contig
Start / Stop / Direction3,237 / 2,851 / - [in whole cluster]
3,237 / 2,851 / - [in contig]
Locationcomplement(2851..3237) [in whole cluster]
complement(2851..3237) [in contig]
TypeCDS
Length387 bp (128 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)transcription factor
Gene
Gene (GenBank)
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in C-1027 biosynthesis.
Note (GenBank)
  • ORF(-4); similar to SCP1
Reference
ACC
PmId
[12183628] Biosynthesis of the enediyne antitumor antibiotic C-1027. (Science. , 2002)
comment
C-1027の生合成遺伝子クラスターの報告

ORF(-4)は、C-1027生合成遺伝子クラスターと一緒に取得された配列。特にふれていない。

close this sectionSequence

selected fasta
>hypothetical protein [transcription factor]
MSSLLTDSDLVHEAKVVWLEDPEGLDYVRQALDKTPRRKNKPRYARDGRMIGYIELGADA
EADPDSGLYRRRVFFLLPHDRDSDPEGVYRQGAPGEAVDPRTIEPNRVGEKTPRSQLGTS
STVAATGS
selected fasta
>hypothetical protein [transcription factor]
ATGAGCTCGCTACTGACCGACAGCGATCTCGTTCACGAGGCGAAGGTCGTGTGGCTCGAA
GATCCCGAGGGACTCGACTACGTCCGCCAGGCCCTGGACAAGACCCCCCGGCGCAAGAAC
AAGCCGCGCTACGCCCGCGACGGCCGCATGATCGGCTACATCGAACTCGGGGCCGACGCC
GAAGCGGACCCGGACAGCGGTCTGTACCGGCGCCGGGTCTTCTTCCTGCTCCCCCATGAC
CGGGACTCCGACCCCGAAGGCGTCTACCGGCAAGGTGCCCCCGGAGAGGCCGTCGACCCC
CGCACCATCGAGCCCAACCGCGTCGGCGAAAAGACCCCCCGCTCCCAGCTGGGCACCTCC
TCCACCGTGGCCGCGACCGGCTCCTAG

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro No significant hit
SignalP No significant hit
TMHMM No significant hit
C1027_00030 C1027_00030   C1027_00050 C1027_00050
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