Teicp_00460 Teicp_00460   Teicp_00480 Teicp_00480

Teicp_00470 : CDS information

close this sectionLocation

Organism
StrainDSM 43866 (=NBRC 13999)
Entry nameTeicoplanin
Contig
Start / Stop / Direction85,345 / 84,452 / - [in whole cluster]
85,345 / 84,452 / - [in contig]
Locationcomplement(84452..85345) [in whole cluster]
complement(84452..85345) [in contig]
TypeCDS
Length894 bp (297 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.1 general function
Productputative transposase
Product (GenBank)transposase
Gene
Gene (GenBank)
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in teicoplanin biosynthesis.
Note (GenBank)
  • ORF32*
Reference
ACC
PmId
[15113000] Biosynthetic gene cluster of the glycopeptide antibiotic teicoplanin: characterization of two glycosyltransferases and the key acyltransferase. (Chem Biol. , 2004)
comment
DSM 43866株teicoplanin生合成gene clusterの同定論文。

tei orf32*: Transposase

挿入配列とMn輸送に関与する遺伝子があったことから、clusterには下流限界が含まれていると判断している。
Related Reference
ACC
Q6ZZG1
NITE
Teicp2_00510
comment
ATCC 31121株teicoplanin生合成gene cluster報告論文[PMID: 14702401]には、このORFについての記載なし。
Family/Domain
FD
IPR025161
comment
[IPR025161] Putative transposase IS4/IS5 family (Family)

close this sectionSequence

selected fasta
>putative transposase [transposase]
MPRVAAARRHDLTDVQWAVLEPALPAEPRRGRPPRWTKRQIIDGIRWRVRAGTPWRDVPE
VYAPWQTLYRWFRRWQRDGTWAKILARLQTRADAAGDIEWAVSVDSTISRAHQHAAGARR
DGDLQKEPPGGVFAEPGDHALGRSRGGFTTKTHLACEQGRKTLSTVITAGQRGDSPQFIK
VLERIKVYRVGGGRPRTRPDLVLADKAYTSRGNRGYARRRRIRVCIPSKADQDAYRKAKG
SKGGRPPAFDPVVYRQRHAVECGINQLKQNRAMATRYDKLAVRFEATVTIAVINQWL
selected fasta
>putative transposase [transposase]
GTGCCCAGGGTAGCGGCAGCGAGGCGACACGATCTCACCGACGTTCAGTGGGCGGTGCTG
GAACCTGCGCTGCCTGCGGAGCCACGGCGAGGCCGTCCGCCGCGATGGACGAAACGGCAG
ATCATCGATGGGATCCGGTGGCGGGTCCGGGCGGGAACACCGTGGCGGGACGTGCCCGAG
GTGTACGCACCCTGGCAGACGTTGTATCGCTGGTTCCGGCGCTGGCAGCGCGACGGGACG
TGGGCGAAGATCCTGGCCCGGCTCCAGACCCGGGCCGACGCCGCCGGTGACATCGAGTGG
GCGGTGAGCGTCGATTCCACGATCAGCCGTGCCCATCAGCATGCCGCGGGTGCCCGTCGT
GATGGTGACCTGCAGAAGGAACCGCCGGGTGGGGTGTTCGCCGAACCCGGCGATCATGCT
CTGGGCAGGTCCCGGGGCGGGTTCACCACCAAGACCCATCTGGCCTGTGAGCAGGGTCGT
AAGACGCTGTCGACGGTGATCACCGCTGGTCAGCGGGGTGACAGCCCGCAGTTCATCAAG
GTCCTGGAACGCATCAAGGTCTATCGGGTCGGTGGTGGCCGGCCCCGTACCCGGCCGGAT
CTGGTCCTGGCGGACAAGGCGTACACCAGCCGGGGCAATCGCGGGTACGCCCGCCGCCGC
AGGATCAGGGTGTGCATCCCGAGCAAGGCCGACCAGGACGCCTACCGCAAGGCCAAAGGC
TCCAAGGGCGGGCGTCCTCCGGCGTTCGACCCGGTCGTGTACCGGCAGCGTCACGCCGTG
GAATGCGGCATCAACCAGCTCAAACAGAACCGGGCGATGGCCACCCGGTACGACAAGCTT
GCCGTCCGCTTCGAAGCCACCGTCACCATCGCCGTCATCAACCAATGGCTCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR025161 Putative transposase IS4/IS5 family (Family)
[12-85] 1.1e-26 PF13340
PF13340   DUF4096
SignalP No significant hit
TMHMM No significant hit
Teicp_00460 Teicp_00460   Teicp_00480 Teicp_00480
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