Lydi_00070 Lydi_00070   Lydi_00090 Lydi_00090

Lydi_00080 : CDS information

close this sectionLocation

Organism
StrainTP-A0598 (=NBRC 110027)
Entry nameLydicamycin
Contig
Start / Stop / Direction11,731 / 11,925 / + [in whole cluster]
11,731 / 11,925 / + [in contig]
Location11731..11925 [in whole cluster]
11731..11925 [in contig]
TypeCDS
Length195 bp (64 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
GeneTPA0598_03_00720
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[26380643] Draft genome sequence of marine-derived Streptomyces sp. TP-A0598, a producer of anti-MRSA antibiotic lydicamycins. (Stand Genomic Sci. , 2015)
comment
Streptomyces sp. TP-A0598におけるputative lydicamycin biosynthetic gene clusterの報告。
このclusterが実際にlydicamycin産生に関わるかどうかの実験的な確認はされていない。

TPA0598_03_00720(64aa): unknown

本文中にコメントなし。

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MVAPSLLSGTAVGLPAGLERAGAAAGISPPDLPCDPYPRTELLRFTPVHRVIHRDPDRDR
RINP
selected fasta
>hypothetical protein [hypothetical protein]
ATGGTCGCGCCGTCGCTGCTGAGCGGTACGGCCGTGGGGCTGCCGGCGGGCCTGGAGCGC
GCGGGAGCAGCGGCCGGTATTTCGCCACCCGACCTTCCTTGCGACCCGTATCCACGCACG
GAACTTCTCCGCTTCACACCCGTACACCGGGTAATTCACCGCGACCCTGACCGGGACCGC
CGTATCAACCCCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		No significant hit
InterPro No significant hit
SignalP No significant hit
TMHMM No significant hit
Lydi_00070 Lydi_00070   Lydi_00090 Lydi_00090
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