Lydi_00160 Lydi_00160   Lydi_00180 Lydi_00180

Lydi_00170 : CDS information

close this sectionLocation

Organism
StrainTP-A0598 (=NBRC 110027)
Entry nameLydicamycin
Contig
Start / Stop / Direction98,515 / 99,327 / + [in whole cluster]
98,515 / 99,327 / + [in contig]
Location98515..99327 [in whole cluster]
98515..99327 [in contig]
TypeCDS
Length813 bp (270 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
GeneTPA0598_03_00810
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[26380643] Draft genome sequence of marine-derived Streptomyces sp. TP-A0598, a producer of anti-MRSA antibiotic lydicamycins. (Stand Genomic Sci. , 2015)
comment
Streptomyces sp. TP-A0598におけるputative lydicamycin biosynthetic gene clusterの報告。
このclusterが実際にlydicamycin産生に関わるかどうかの実験的な確認はされていない。

TPA0598_03_00810(270aa): unknown

本文中にコメントなし。

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MAVPGSWKSLTSDGKDLVLAVDFAVTGRPQAGFPEFVALAHPQFSLWETLPPAPEEDAGM
TGADYVERWAADVLREGRPVRAVMGYCVGAVYAAALAERIGRSQGETPALIGFDPELPRR
DVVCHHFLTTMEGMSGLLTPAEIAHAQQAAGQALTDEGDIKKFGERLLEIFREVGGAAFA
RVGLDAKRSEEFVATFGLFLHFFVRGSDLDPTAGWKSLTAMTSATPTSGLNPLSEADRAD
RVAKEIRFPVEHADLLRTPDVATTVTGLLS
selected fasta
>hypothetical protein [hypothetical protein]
ATGGCAGTTCCCGGCTCGTGGAAATCGTTGACTTCGGACGGAAAGGATCTGGTACTCGCG
GTCGATTTCGCGGTGACCGGAAGGCCGCAGGCAGGCTTTCCGGAATTCGTCGCGCTCGCC
CATCCGCAATTCTCGCTCTGGGAGACACTGCCGCCCGCCCCGGAGGAGGACGCCGGAATG
ACCGGCGCCGACTACGTCGAACGCTGGGCGGCGGACGTGCTCCGGGAGGGCCGCCCGGTC
CGGGCCGTCATGGGCTACTGCGTCGGAGCGGTGTACGCGGCGGCGCTCGCCGAGCGCATC
GGGCGCAGCCAGGGCGAGACGCCCGCACTCATCGGCTTCGACCCCGAGCTGCCCCGGCGT
GATGTGGTCTGTCACCACTTCCTGACCACCATGGAGGGGATGTCGGGGCTGCTCACGCCG
GCGGAGATCGCGCACGCCCAGCAGGCCGCGGGGCAGGCGCTGACCGACGAGGGCGACATC
AAGAAGTTCGGTGAGCGGCTGCTGGAGATCTTCCGGGAGGTCGGCGGCGCGGCCTTCGCA
CGGGTCGGCCTGGACGCCAAGCGCAGCGAGGAATTCGTCGCCACCTTCGGCCTGTTCCTG
CACTTCTTCGTACGGGGCAGTGACCTCGACCCGACGGCCGGCTGGAAGTCGCTGACCGCG
ATGACCTCCGCGACCCCCACCAGTGGCCTCAACCCGCTGTCCGAAGCCGACCGGGCCGAC
CGGGTGGCCAAGGAGATCCGCTTCCCCGTCGAGCACGCCGATCTGCTGCGCACGCCCGAC
GTCGCCACCACGGTCACCGGCCTGCTGAGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro No significant hit
SignalP No significant hit
TMHMM No significant hit
Lydi_00160 Lydi_00160   Lydi_00180 Lydi_00180
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