BLAST table : Gelda_00160

DBUniProtKB
accessionDBalignmentEvalueScoreIdent.linkproductgeneorganismec
1
 Q848B1_STRHY
(Q848B1)		 
[query] 1 - 210 (210)
[subject] 1 - 210 (210)
 1e-113 411   100% Putative ECF-family sigma factor gdnS Streptomyces hygroscopicus
2
 Q49BB8_STRHY
(Q49BB8)		 Jump to Gelda2_00310 
[query] 1 - 210 (210)
[subject] 1 - 210 (210)
 2e-96 355   90% Putative sigma factor Streptomyces hygroscopicus
3
 E0KZD7_STRVO
(E0KZD7)		 
[query] 1 - 210 (210)
[subject] 1 - 210 (210)
 5e-90 334   91% RNA polymerase, sigma-24 subunit, ECF subfamily StrviDRAFT_8015 Streptomyces violaceusniger Tu 4113
4
 D9WW70_9ACTO
(D9WW70)		 
[query] 23 - 203 (210)
[subject] 10 - 190 (207)
 4e-61 238   72% RNA polymerase sigma factor SSOG_06240 Streptomyces himastatinicus ATCC 53653
5
 A3KIE8_STRAM
(A3KIE8)		 
[query] 23 - 202 (210)
[subject] 27 - 206 (213)
 7e-59 231   67% RNA polymerase sigma factor SAML0492 Streptomyces ambofaciens ATCC 23877
6
 E4MYV0_KITSK
(E4MYV0)		 
[query] 22 - 202 (210)
[subject] 31 - 211 (220)
 4e-58 228   68% RNA polymerase sigma factor KSE_70250 Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)
Streptomyces setae
7
 F3ND52_9ACTO
(F3ND52)		 
[query] 20 - 198 (210)
[subject] 8 - 186 (204)
 1e-57 226   65% ECF family RNA polymerase sigma factor SGM_1066 Streptomyces griseoaurantiacus M045
8
 C9Z3X6_STRSW
(C9Z3X6)		 
[query] 6 - 200 (210)
[subject] 2 - 196 (213)
 5e-57 224   61% RNA polymerase sigma factor SCAB_41571 Streptomyces scabies (strain 87.22)
Streptomyces scabiei
9
 Q82PK4_STRAW
(Q82PK4)		 
[query] 20 - 196 (210)
[subject] 17 - 193 (204)
 2e-56 223   64% RNA polymerase sigma factor sig10
SAV898
SAV_898		 Streptomyces avermitilis
10
 B1W4P0_STRGG
(B1W4P0)		 
[query] 22 - 180 (210)
[subject] 40 - 198 (230)
 2e-55 219   68% RNA polymerase sigma factor SGR_6228 Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
11
 B5HT54_9ACTO
(B5HT54)		 
[query] 23 - 189 (210)
[subject] 39 - 205 (213)
 2e-55 219   65% RNA polymerase sigma factor SSEG_02771 Streptomyces sviceus ATCC 29083
12
 D2BF54_STRRD
(D2BF54)		 
[query] 12 - 203 (210)
[subject] 9 - 200 (200)
 1e-54 216   64% RNA polymerase sigma factor Sros_3479 Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)
13
 D6A485_9ACTO
(D6A485)		 
[query] 23 - 201 (210)
[subject] 34 - 212 (220)
 4e-54 215   62% RNA polymerase sigma factor SSFG_06875 Streptomyces ghanaensis ATCC 14672
14
 Q9RCU5_STRCO
(Q9RCU5)		 
[query] 23 - 203 (210)
[subject] 27 - 207 (213)
 4e-53 211   65% Probable ECF-family sigma factor SCO0866 Streptomyces coelicolor
15
 D6EWW3_STRLI
(D6EWW3)		 
[query] 23 - 203 (210)
[subject] 27 - 207 (213)
 4e-53 211   65% ECF family RNA polymerase sigma factor SSPG_06730 Streptomyces lividans TK24
16
 D9XBU2_STRVR
(D9XBU2)		 
[query] 7 - 185 (210)
[subject] 4 - 182 (208)
 4e-52 208   61% RNA polymerase sigma factor SSQG_07163 Streptomyces viridochromogenes DSM 40736
17
 Q9RCU7_STRCO
(Q9RCU7)		 
[query] 21 - 189 (210)
[subject] 8 - 176 (198)
 2e-51 206   66% Probable ECF-family sigma factor SCO0864 Streptomyces coelicolor
18
 D6EWW5_STRLI
(D6EWW5)		 
[query] 21 - 189 (210)
[subject] 19 - 187 (209)
 2e-51 206   66% ECF family RNA polymerase sigma factor SSPG_06732 Streptomyces lividans TK24
19
 D6KDV1_9ACTO
(D6KDV1)		 
[query] 20 - 205 (210)
[subject] 13 - 198 (200)
 5e-51 204   57% RNA polymerase sigma-70 factor, ECF subfamily SSTG_05126 Streptomyces sp. e14
20
 D9WJ79_9ACTO
(D9WJ79)		 
[query] 34 - 201 (210)
[subject] 15 - 182 (189)
 6e-51 204   62% RNA polymerase sigma factor SSOG_08890 Streptomyces himastatinicus ATCC 53653
21
 D9UPH3_9ACTO
(D9UPH3)		 
[query] 3 - 208 (210)
[subject] 4 - 212 (213)
 7e-51 204   60% RNA polymerase sigma factor SSLG_00079 Streptomyces sp. SPB78
22
 F2R4I7_STRVP
(F2R4I7)		 
[query] 34 - 203 (210)
[subject] 40 - 209 (234)
 9e-51 204   62% RNA polymerase sigma factor SVEN_0176 Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
23
 D7BV48_STRBB
(D7BV48)		 
[query] 24 - 203 (210)
[subject] 16 - 197 (214)
 9e-50 200   69% RNA polymerase sigma factor sig9
SBI_02306		 Streptomyces bingchenggensis (strain BCW-1)
24
 D9Y1Z3_9ACTO
(D9Y1Z3)		 
[query] 1 - 185 (210)
[subject] 1 - 177 (204)
 5e-49 198   59% RNA polymerase sigma factor SSRG_05790 Streptomyces griseoflavus Tu4000
25
 B5GY45_STRCL
(B5GY45)		 
[query] 13 - 193 (210)
[subject] 22 - 202 (215)
 5e-48 195   64% RNA polymerase sigma factor SSCG_04232 Streptomyces clavuligerus ATCC 27064
26
 E2PUP7_STRCL
(E2PUP7)		 
[query] 13 - 193 (210)
[subject] 33 - 213 (226)
 6e-48 194   64% RNA polymerase sigma factor SCLAV_2754 Streptomyces clavuligerus ATCC 27064
27
 E8W4X7_STRFA
(E8W4X7)		 
[query] 7 - 196 (210)
[subject] 15 - 207 (255)
 1e-47 193   60% RNA polymerase sigma factor Sfla_0340 Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD)
28
 Q82QA6_STRAW
(Q82QA6)		 
[query] 36 - 205 (210)
[subject] 43 - 212 (217)
 1e-47 193   62% RNA polymerase sigma factor sig5
SAV614
SAV_614		 Streptomyces avermitilis
29
 A4FP16_SACEN
(A4FP16)		 
[query] 19 - 194 (210)
[subject] 4 - 174 (184)
 1e-46 190   63% RNA polymerase sigma factor sigC
SACE_6625		 Saccharopolyspora erythraea (strain NRRL 23338)
30
 F1D8X4_9ACTO
(F1D8X4)		 
[query] 19 - 201 (210)
[subject] 22 - 204 (231)
 2e-45 186   61% RNA polymerase sigma factor Streptomyces sp. MJM7001
31
 E9KTF7_9ACTO
(E9KTF7)		 
[query] 19 - 201 (210)
[subject] 22 - 204 (231)
 2e-45 186   61% RNA polymerase sigma factor Tcs_11604BP_003 Streptomyces sp. KCTC 11604BP
32
 D8HYW3_AMYMU
(D8HYW3)		 
[query] 21 - 197 (210)
[subject] 37 - 212 (222)
 3e-43 179   56% RNA polymerase sigma factor rpoE
AMED_6529		 Amycolatopsis mediterranei (strain U-32)
33
 C6WP37_ACTMD
(C6WP37)		 
[query] 14 - 192 (210)
[subject] 4 - 179 (192)
 5e-43 178   56% RNA polymerase, sigma-24 subunit, ECF subfamily Amir_2773 Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
34
 A8M5Q2_SALAI
(A8M5Q2)		 
[query] 22 - 192 (210)
[subject] 3 - 168 (188)
 1e-42 176   58% RNA polymerase sigma factor Sare_2785 Salinispora arenicola (strain CNS-205)
35
 A4X831_SALTO
(A4X831)		 
[query] 1 - 198 (210)
[subject] 11 - 204 (216)
 2e-42 176   52% RNA polymerase sigma factor Strop_2587 Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
36
 C4RBD5_9ACTO
(C4RBD5)		 
[query] 19 - 194 (210)
[subject] 10 - 183 (198)
 4e-41 171   60% Sigma-70 region 4 domain-containing protein MCAG_00025 Micromonospora sp. ATCC 39149
37
 D9V5P5_9ACTO
(D9V5P5)		 
[query] 22 - 192 (210)
[subject] 8 - 178 (189)
 2e-39 166   54% RNA polymerase sigma factor SSMG_02824 Streptomyces sp. AA4
38
 D8I197_AMYMU
(D8I197)		 
[query] 22 - 192 (210)
[subject] 6 - 173 (183)
 5e-39 165   59% RNA polymerase sigma factor rpoE
AMED_2991		 Amycolatopsis mediterranei (strain U-32)
39
 D2K2C6_9MYCO
(D2K2C6)		 
[query] 3 - 206 (210)
[subject] 4 - 213 (235)
 7e-39 164   49% RNA polymerase sigma factor sigC Mycobacterium chubuense NBB4
40
 D9TBE1_MICAI
(D9TBE1)		 
[query] 22 - 194 (210)
[subject] 5 - 175 (187)
 2e-38 163   58% RNA polymerase sigma factor Micau_3015 Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
41
 D8HYW4_AMYMU
(D8HYW4)		 
[query] 22 - 206 (210)
[subject] 8 - 190 (190)
 3e-38 162   53% RNA polymerase sigma-70 factor, ECF subfamily rpoE
AMED_6530		 Amycolatopsis mediterranei (strain U-32)
42
 E8SAJ5_MICSL
(E8SAJ5)		 
[query] 19 - 194 (210)
[subject] 2 - 175 (187)
 6e-38 161   57% RNA polymerase sigma factor ML5_5372 Micromonospora sp. (strain L5)
43
 D9VFK0_9ACTO
(D9VFK0)		 
[query] 22 - 201 (210)
[subject] 72 - 247 (252)
 7e-38 161   54% RNA polymerase sigma factor RpoE SSMG_03804 Streptomyces sp. AA4
44
 B1ME35_MYCA9
(B1ME35)		 
[query] 17 - 192 (210)
[subject] 1 - 172 (183)
 1e-37 160   53% RNA polymerase sigma factor MAB_3428c Mycobacterium abscessus (strain ATCC 19977 / DSM 44196)
45
 B2HKM8_MYCMM
(B2HKM8)		 
[query] 17 - 192 (210)
[subject] 1 - 173 (184)
 8e-37 157   53% RNA polymerase sigma factor sigC_1
MMAR_0265		 Mycobacterium marinum (strain ATCC BAA-535 / M)
46
 A0PWN1_MYCUA
(A0PWN1)		 
[query] 17 - 192 (210)
[subject] 1 - 173 (184)
 8e-37 157   53% RNA polymerase sigma factor sigC_1
MUL_4849		 Mycobacterium ulcerans (strain Agy99)
47
 D5NVD8_CORAM
(D5NVD8)		 
[query] 22 - 192 (210)
[subject] 35 - 204 (208)
 2e-34 149   51% RNA polymerase sigma-70 factor, ECF subfamily HMPREF0281_00542 Corynebacterium ammoniagenes DSM 20306
48
 F5YTW3_9MYCO
(F5YTW3)		 
[query] 21 - 201 (210)
[subject] 283 - 457 (462)
 3e-34 149   51% RNA polymerase sigma factor sigC
JDM601_0986		 Mycobacterium sp. JDM601
49
 F4FET8_VERMA
(F4FET8)		 
[query] 19 - 207 (210)
[subject] 2 - 188 (192)
 3e-34 149   52% RNA polymerase sigma factor VAB18032_06790 Verrucosispora maris (strain AB-18-032)
50
 D7B4I7_NOCDD
(D7B4I7)		 
[query] 22 - 198 (210)
[subject] 104 - 274 (274)
 4e-34 149   52% RNA polymerase, sigma-24 subunit, ECF subfamily Ndas_3581 Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488)
Actinomadura dassonvillei
51
 C2GJD6_9CORY
(C2GJD6)		 
[query] 22 - 192 (210)
[subject] 3 - 167 (169)
 8e-34 147   48% RNA polymerase sigma factor HMPREF0293_2029 Corynebacterium glucuronolyticum ATCC 51866
52
 C0VRJ6_9CORY
(C0VRJ6)		 
[query] 22 - 192 (210)
[subject] 3 - 167 (169)
 8e-34 147   48% RNA polymerase sigma factor HMPREF0294_0438 Corynebacterium glucuronolyticum ATCC 51867
53
 D6ZAB3_SEGRD
(D6ZAB3)		 
[query] 36 - 192 (210)
[subject] 33 - 190 (206)
 2e-33 146   53% RNA polymerase, sigma-24 subunit, ECF subfamily Srot_0166 Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)
54
 E2S5U7_9CORY
(E2S5U7)		 
[query] 19 - 194 (210)
[subject] 5 - 177 (180)
 2e-33 146   51% RNA polymerase sigma-70 factor sigC
HMPREF0305_11838		 Corynebacterium pseudogenitalium ATCC 33035
55
 C6R7L0_9CORY
(C6R7L0)		 
[query] 19 - 194 (210)
[subject] 5 - 177 (180)
 3e-33 145   51% RNA polymerase sigma factor CORTU0001_0901 Corynebacterium tuberculostearicum SK141
56
 B1VI44_CORU7
(B1VI44)		 
[query] 15 - 192 (210)
[subject] 12 - 189 (220)
 4e-33 145   49% ECF-family sigma factor C sigC
cu1885		 Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109)
57
 Q8NTQ2_CORGL
(Q8NTQ2)		 
[query] 22 - 203 (210)
[subject] 7 - 185 (193)
 6e-33 145   49% DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs
Sigma-70 factor (ECF subfamily)		 sigC
Cgl0254
cg0309		 Corynebacterium glutamicum
Brevibacterium flavum
58
 A4QAP8_CORGB
(A4QAP8)		 
[query] 22 - 203 (210)
[subject] 7 - 185 (193)
 1e-32 143   49% Putative uncharacterized protein cgR_0331 Corynebacterium glutamicum (strain R)
59
 C4LGM1_CORK4
(C4LGM1)		 
[query] 22 - 192 (210)
[subject] 33 - 204 (228)
 2e-32 143   49% RNA polymerase sigma factor sigC
ckrop_0184		 Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717)
60
 A0QFD5_MYCA1
(A0QFD5)		 
[query] 16 - 201 (210)
[subject] 217 - 396 (401)
 2e-32 142   50% RNA polymerase sigma factor MAV_2426 Mycobacterium avium (strain 104)
61
 Q73YY9_MYCPA
(Q73YY9)		 
[query] 16 - 202 (210)
[subject] 275 - 455 (459)
 2e-32 142   50% Putative uncharacterized protein MAP_1814 Mycobacterium paratuberculosis
62
 Q4JSN0_CORJK
(Q4JSN0)		 
[query] 18 - 192 (210)
[subject] 7 - 182 (205)
 3e-32 142   49% ECF-family sigma factor C sigC
jk1995		 Corynebacterium jeikeium (strain K411)
63
 C8RV42_CORJE
(C8RV42)		 
[query] 18 - 192 (210)
[subject] 7 - 182 (206)
 3e-32 142   49% RNA polymerase sigma-70 factor, ECF subfamily sigC
HMPREF0297_1894		 Corynebacterium jeikeium ATCC 43734
64
 F7P1W7_MYCPA
(F7P1W7)		 
[query] 16 - 202 (210)
[subject] 275 - 455 (459)
 3e-32 142   50% RNA polymerase sigma factor, sigma-70 family MAPs_24630 Mycobacterium avium subsp. paratuberculosis S397
65
 D7WBF1_9CORY
(D7WBF1)		 
[query] 22 - 192 (210)
[subject] 5 - 174 (185)
 5e-32 141   52% RNA polymerase sigma-70 factor sigC
HMPREF0291_10440		 Corynebacterium genitalium ATCC 33030
66
 E2MYK9_9CORY
(E2MYK9)		 
[query] 21 - 196 (210)
[subject] 8 - 179 (192)
 7e-32 141   49% RNA polymerase sigma factor CORAM0001_1572 Corynebacterium amycolatum SK46
67
 E5XPW1_9ACTO
(E5XPW1)		 
[query] 36 - 192 (210)
[subject] 20 - 177 (193)
 8e-32 141   52% Sigma-70 family RNA polymerase sigma factor HMPREF9336_01533 Segniliparus rugosus ATCC BAA-974
68
 F4D1Q9_9PSEU
(F4D1Q9)		 
[query] 22 - 196 (210)
[subject] 6 - 175 (184)
 8e-32 140   53% RNA polymerase, sigma-24 subunit, ECF subfamily Psed_5845 Pseudonocardia dioxanivorans CB1190
69
 C0WHW8_9CORY
(C0WHW8)		 
[query] 19 - 192 (210)
[subject] 5 - 175 (180)
 3e-31 139   50% ECF family DNA-directed RNA polymerase sigma subunit SigY HMPREF0276_1054 Corynebacterium accolens ATCC 49725
70
 C8NR78_COREF
(C8NR78)		 
[query] 22 - 200 (210)
[subject] 7 - 182 (186)
 3e-31 139   48% RNA polymerase sigma-70 factor, ECF subfamily sigC
HMPREF0290_2503		 Corynebacterium efficiens YS-314
71
 Q8FTZ9_COREF
(Q8FTZ9)		 
[query] 22 - 200 (210)
[subject] 23 - 198 (202)
 4e-31 139   48% Putative RNA polymerase sigma factor CE0223 Corynebacterium efficiens
72
 Q9CC01_MYCLE
(Q9CC01)		 
[query] 17 - 200 (210)
[subject] 1 - 178 (184)
 4e-31 138   51% RNA polymerase sigma factor ML1448 Mycobacterium leprae
73
 B8ZRM6_MYCLB
(B8ZRM6)		 
[query] 17 - 200 (210)
[subject] 1 - 178 (184)
 4e-31 138   51% RNA polymerase sigma factor MLBr01448 Mycobacterium leprae (strain Br4923)
74
 C3PJS1_CORA7
(C3PJS1)		 
[query] 22 - 192 (210)
[subject] 8 - 177 (182)
 1e-30 137   49% ECF-family sigma factor C sigC
cauri_0193		 Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1)
Corynebacterium nigricans
75
 D5P4Q7_9MYCO
(D5P4Q7)		 
[query] 17 - 185 (210)
[subject] 273 - 438 (457)
 2e-30 136   50% RNA polymerase sigma factor sigC
HMPREF0591_1151		 Mycobacterium parascrofulaceum ATCC BAA-614
76
 C2CS81_CORST
(C2CS81)		 
[query] 22 - 192 (210)
[subject] 10 - 179 (188)
 3e-30 135   49% ECF family DNA-directed RNA polymerase sigma subunit SigY HMPREF0308_2260 Corynebacterium striatum ATCC 6940
77
 C0XU56_9CORY
(C0XU56)		 
[query] 26 - 192 (210)
[subject] 46 - 211 (215)
 3e-30 135   51% RNA polymerase sigma factor HMPREF0298_1976 Corynebacterium lipophiloflavum DSM 44291
78
 C1APY8_MYCBT
(C1APY8)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor sigC
JTY_2082		 Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)
79
 A5U494_MYCTA
(A5U494)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor sigC
MRA_2083		 Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
80
 A1KKB5_MYCBP
(A1KKB5)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor sigC
BCG_2088		 Mycobacterium bovis (strain BCG / Pasteur 1173P2)
81
 F8LZW1_9MYCO
(F8LZW1)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% Putative RNA polymerase sigma factor, ECF subfamily, SIGC sigC
MAF_20840		 Mycobacterium africanum GM041182
82
 F7WSC7_MYCTU
(F7WSC7)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% ECF subfamily RNA polymerase sigma factor CCDC5180_1889 Mycobacterium tuberculosis CCDC5180
83
 F7WD65_MYCTU
(F7WD65)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% ECF subfamily RNA polymerase sigma factor CCDC5079_1913 Mycobacterium tuberculosis CCDC5079
84
 F2VBX1_MYCTU
(F2VBX1)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TBPG_01561 Mycobacterium tuberculosis W-148
85
 E9ZKI1_MYCTU
(E9ZKI1)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMMG_01343 Mycobacterium tuberculosis CDC1551A
86
 E2WIP1_MYCTU
(E2WIP1)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMLG_03562 Mycobacterium tuberculosis SUMu012
87
 E2W6Q3_MYCTU
(E2W6Q3)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMKG_00328 Mycobacterium tuberculosis SUMu011
88
 E2VVH7_MYCTU
(E2VVH7)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMJG_00327 Mycobacterium tuberculosis SUMu010
89
 E2VJ66_MYCTU
(E2VJ66)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMIG_00734 Mycobacterium tuberculosis SUMu009
90
 E2V9V2_MYCTU
(E2V9V2)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMHG_01256 Mycobacterium tuberculosis SUMu008
91
 E2UZN8_MYCTU
(E2UZN8)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMGG_00624 Mycobacterium tuberculosis SUMu007
92
 E2UME1_MYCTU
(E2UME1)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMFG_01025 Mycobacterium tuberculosis SUMu006
93
 E2UAU7_MYCTU
(E2UAU7)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMEG_02434 Mycobacterium tuberculosis SUMu005
94
 E2TZG6_MYCTU
(E2TZG6)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMDG_00548 Mycobacterium tuberculosis SUMu004
95
 E2TMY4_MYCTU
(E2TMY4)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMCG_00165 Mycobacterium tuberculosis SUMu003
96
 E2TAI9_MYCTU
(E2TAI9)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMBG_00616 Mycobacterium tuberculosis SUMu002
97
 E1HAM7_MYCTU
(E1HAM7)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TMAG_02252 Mycobacterium tuberculosis SUMu001
98
 D7ESF8_MYCTU
(D7ESF8)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TBAG_00991 Mycobacterium tuberculosis 94_M4241A
99
 D5ZIS4_MYCTU
(D5ZIS4)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TBJG_00546 Mycobacterium tuberculosis T17
100
 D5Z4T3_MYCTU
(D5Z4T3)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49% RNA polymerase sigma factor TBIG_01463 Mycobacterium tuberculosis GM 1503
accessionDBalignmentEvalueScoreIdent.linkinformationpubmed
2
 Q49BB8_STRHY
(Q49BB8)		 Jump to Gelda2_00310 
[query] 1 - 210 (210)
[subject] 1 - 210 (210)
 2e-96 355   90%
Product
Putative sigma factor
Gene
 
Organism
Streptomyces hygroscopicus
1uniprot[Pubmed] 16085885
Insights into the biosynthesis of the benzoquinone ansamycins geldanamycin and herbimycin, obtained by gene sequencing and disruption.(Appl. Environ. Microbiol.) [2005]
5
 A3KIE8_STRAM
(A3KIE8)		 
[query] 23 - 202 (210)
[subject] 27 - 206 (213)
 7e-59 231   67%
Product
RNA polymerase sigma factor
Gene
SAML0492
Organism
Streptomyces ambofaciens ATCC 23877
1uniprot[Pubmed] 16956972
Evolution of the terminal regions of the Streptomyces linear chromosome.(Mol. Biol. Evol.) [2006]
6
 E4MYV0_KITSK
(E4MYV0)		 
[query] 22 - 202 (210)
[subject] 31 - 211 (220)
 4e-58 228   68%
Product
RNA polymerase sigma factor
Gene
KSE_70250
Organism
Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)
Streptomyces setae
1uniprot[Pubmed] 21059706
Genome sequence of Kitasatospora setae NBRC 14216T: an evolutionary snapshot of the family Streptomycetaceae.(DNA Res.) [2010]
7
 F3ND52_9ACTO
(F3ND52)		 
[query] 20 - 198 (210)
[subject] 8 - 186 (204)
 1e-57 226   65%
Product
ECF family RNA polymerase sigma factor
Gene
SGM_1066
Organism
Streptomyces griseoaurantiacus M045
1uniprot[Pubmed] 21551298
Draft Genome Sequence of the Marine Bacterium Streptomyces griseoaurantiacus M045, Which Produces Novel Manumycin-Type Antibiotics with a pABA Core Component.(J. Bacteriol.) [2011]
8
 C9Z3X6_STRSW
(C9Z3X6)		 
[query] 6 - 200 (210)
[subject] 2 - 196 (213)
 5e-57 224   61%
Product
RNA polymerase sigma factor
Gene
SCAB_41571
Organism
Streptomyces scabies (strain 87.22)
Streptomyces scabiei
1uniprot[Pubmed] 20064060
Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions.(Mol. Plant Microbe Interact.) [2010]
9
 Q82PK4_STRAW
(Q82PK4)		 
[query] 20 - 196 (210)
[subject] 17 - 193 (204)
 2e-56 223   64%
Product
RNA polymerase sigma factor
Gene
sig10
SAV898
SAV_898
Organism
Streptomyces avermitilis
1uniprot[Pubmed] 11572948 [Medline] 21477403
Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites.(Proc. Natl. Acad. Sci. U.S.A.) [2001]
10
 B1W4P0_STRGG
(B1W4P0)		 
[query] 22 - 180 (210)
[subject] 40 - 198 (230)
 2e-55 219   68%
Product
RNA polymerase sigma factor
Gene
SGR_6228
Organism
Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
1uniprot[Pubmed] 18375553
Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350.(J. Bacteriol.) [2008]
12
 D2BF54_STRRD
(D2BF54)		 
[query] 12 - 203 (210)
[subject] 9 - 200 (200)
 1e-54 216   64%
Product
RNA polymerase sigma factor
Gene
Sros_3479
Organism
Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)
1uniprot
Complete genome sequence of Streptosporangium roseum type strain (NI 9100T).(Stand. Genomic Sci.) [2010]
14
 Q9RCU5_STRCO
(Q9RCU5)		 
[query] 23 - 203 (210)
[subject] 27 - 207 (213)
 4e-53 211   65%
Product
Probable ECF-family sigma factor
Gene
SCO0866
Organism
Streptomyces coelicolor
1uniprot[Pubmed] 12000953 [Medline] 21996410
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).(Nature) [2002]
17
 Q9RCU7_STRCO
(Q9RCU7)		 
[query] 21 - 189 (210)
[subject] 8 - 176 (198)
 2e-51 206   66%
Product
Probable ECF-family sigma factor
Gene
SCO0864
Organism
Streptomyces coelicolor
1uniprot[Pubmed] 12000953 [Medline] 21996410
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).(Nature) [2002]
22
 F2R4I7_STRVP
(F2R4I7)		 
[query] 34 - 203 (210)
[subject] 40 - 209 (234)
 9e-51 204   62%
Product
RNA polymerase sigma factor
Gene
SVEN_0176
Organism
Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
1uniprot[Pubmed] 21463507
Genome-wide analysis of the role of GlnR in Streptomyces venezuelae provides new insights into global nitrogen regulation in actinomycetes.(BMC Genomics) [2011]
23
 D7BV48_STRBB
(D7BV48)		 
[query] 24 - 203 (210)
[subject] 16 - 197 (214)
 9e-50 200   69%
Product
RNA polymerase sigma factor
Gene
sig9
SBI_02306
Organism
Streptomyces bingchenggensis (strain BCW-1)
1uniprot[Pubmed] 20581206
Genome sequence of the milbemycin-producing bacterium Streptomyces bingchenggensis.(J. Bacteriol.) [2010]
26
 E2PUP7_STRCL
(E2PUP7)		 
[query] 13 - 193 (210)
[subject] 33 - 213 (226)
 6e-48 194   64%
Product
RNA polymerase sigma factor
Gene
SCLAV_2754
Organism
Streptomyces clavuligerus ATCC 27064
1uniprot[Pubmed] 20624727
The sequence of a 1.8-mb bacterial linear plasmid reveals a rich evolutionary reservoir of secondary metabolic pathways.(Genome Biol. Evol.) [2010]
28
 Q82QA6_STRAW
(Q82QA6)		 
[query] 36 - 205 (210)
[subject] 43 - 212 (217)
 1e-47 193   62%
Product
RNA polymerase sigma factor
Gene
sig5
SAV614
SAV_614
Organism
Streptomyces avermitilis
1uniprot[Pubmed] 11572948 [Medline] 21477403
Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites.(Proc. Natl. Acad. Sci. U.S.A.) [2001]
29
 A4FP16_SACEN
(A4FP16)		 
[query] 19 - 194 (210)
[subject] 4 - 174 (184)
 1e-46 190   63%
Product
RNA polymerase sigma factor
Gene
sigC
SACE_6625
Organism
Saccharopolyspora erythraea (strain NRRL 23338)
1uniprot[Pubmed] 17369815
Complete genome sequence of the erythromycin-producing bacterium Saccharopolyspora erythraea NRRL23338.(Nat. Biotechnol.) [2007]
31
 E9KTF7_9ACTO
(E9KTF7)		 
[query] 19 - 201 (210)
[subject] 22 - 204 (231)
 2e-45 186   61%
Product
RNA polymerase sigma factor
Gene
Tcs_11604BP_003
Organism
Streptomyces sp. KCTC 11604BP
1uniprot[Pubmed] 21175203
Biosynthesis of the allylmalonyl-CoA extender unit for the FK506 polyketide synthase proceeds through a dedicated polyketide synthase and facilitates the mutasynthesis of analogues.(J. Am. Chem. Soc.) [2011]
32
 D8HYW3_AMYMU
(D8HYW3)		 
[query] 21 - 197 (210)
[subject] 37 - 212 (222)
 3e-43 179   56%
Product
RNA polymerase sigma factor
Gene
rpoE
AMED_6529
Organism
Amycolatopsis mediterranei (strain U-32)
1uniprot[Pubmed] 20567260
Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism.(Cell Res.) [2010]
33
 C6WP37_ACTMD
(C6WP37)		 
[query] 14 - 192 (210)
[subject] 4 - 179 (192)
 5e-43 178   56%
Product
RNA polymerase, sigma-24 subunit, ECF subfamily
Gene
Amir_2773
Organism
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
1uniprot
Complete genome sequence of Actinosynnema mirum type strain (101).(Stand. Genomic Sci.) [2009]
38
 D8I197_AMYMU
(D8I197)		 
[query] 22 - 192 (210)
[subject] 6 - 173 (183)
 5e-39 165   59%
Product
RNA polymerase sigma factor
Gene
rpoE
AMED_2991
Organism
Amycolatopsis mediterranei (strain U-32)
1uniprot[Pubmed] 20567260
Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism.(Cell Res.) [2010]
39
 D2K2C6_9MYCO
(D2K2C6)		 
[query] 3 - 206 (210)
[subject] 4 - 213 (235)
 7e-39 164   49%
Product
RNA polymerase sigma factor
Gene
sigC
Organism
Mycobacterium chubuense NBB4
1uniprot
Untangling the multiple monooxygenases of Mycobacterium chubuense strain NBB4, a versatile hydrocarbon degrader.(Environ Microbiol Rep) [2010]
41
 D8HYW4_AMYMU
(D8HYW4)		 
[query] 22 - 206 (210)
[subject] 8 - 190 (190)
 3e-38 162   53%
Product
RNA polymerase sigma-70 factor, ECF subfamily
Gene
rpoE
AMED_6530
Organism
Amycolatopsis mediterranei (strain U-32)
1uniprot[Pubmed] 20567260
Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism.(Cell Res.) [2010]
45
 B2HKM8_MYCMM
(B2HKM8)		 
[query] 17 - 192 (210)
[subject] 1 - 173 (184)
 8e-37 157   53%
Product
RNA polymerase sigma factor
Gene
sigC_1
MMAR_0265
Organism
Mycobacterium marinum (strain ATCC BAA-535 / M)
1uniprot[Pubmed] 18403782
Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis.(Genome Res.) [2008]
46
 A0PWN1_MYCUA
(A0PWN1)		 
[query] 17 - 192 (210)
[subject] 1 - 173 (184)
 8e-37 157   53%
Product
RNA polymerase sigma factor
Gene
sigC_1
MUL_4849
Organism
Mycobacterium ulcerans (strain Agy99)
1uniprot[Pubmed] 17210928
Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer.(Genome Res.) [2007]
49
 F4FET8_VERMA
(F4FET8)		 
[query] 19 - 207 (210)
[subject] 2 - 188 (192)
 3e-34 149   52%
Product
RNA polymerase sigma factor
Gene
VAB18032_06790
Organism
Verrucosispora maris (strain AB-18-032)
1uniprot[Pubmed] 21551311
Genome sequence of the abyssomicin- and proximicin-producing marine actinomycete Verrucosispora maris AB-18-032.(J. Bacteriol.) [2011]
50
 D7B4I7_NOCDD
(D7B4I7)		 
[query] 22 - 198 (210)
[subject] 104 - 274 (274)
 4e-34 149   52%
Product
RNA polymerase, sigma-24 subunit, ECF subfamily
Gene
Ndas_3581
Organism
Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488)
Actinomadura dassonvillei
1uniprot
Complete genome sequence of Nocardiopsis dassonvillei type strain (IMRU 509T).(Stand. Genomic Sci.) [2010]
53
 D6ZAB3_SEGRD
(D6ZAB3)		 
[query] 36 - 192 (210)
[subject] 33 - 190 (206)
 2e-33 146   53%
Product
RNA polymerase, sigma-24 subunit, ECF subfamily
Gene
Srot_0166
Organism
Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)
1uniprot
Complete genome sequence of Segniliparus rotundus type strain (CDC 1076T).(Stand. Genomic Sci.) [2010]
56
 B1VI44_CORU7
(B1VI44)		 
[query] 15 - 192 (210)
[subject] 12 - 189 (220)
 4e-33 145   49%
Product
ECF-family sigma factor C
Gene
sigC
cu1885
Organism
Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109)
1uniprot[Pubmed] 18367281
The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing.(J. Biotechnol.) [2008]
57
 Q8NTQ2_CORGL
(Q8NTQ2)		 
[query] 22 - 203 (210)
[subject] 7 - 185 (193)
 6e-33 145   49%
Product
DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs
Sigma-70 factor (ECF subfamily)
Gene
sigC
Cgl0254
cg0309
Organism
Corynebacterium glutamicum
Brevibacterium flavum
1uniprot[Pubmed] 12948626 [Medline] 22830012
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.(J. Biotechnol.) [2003]
58
 A4QAP8_CORGB
(A4QAP8)		 
[query] 22 - 203 (210)
[subject] 7 - 185 (193)
 1e-32 143   49%
Product
Putative uncharacterized protein
Gene
cgR_0331
Organism
Corynebacterium glutamicum (strain R)
1uniprot[Pubmed] 17379713
Comparative analysis of the Corynebacterium glutamicum group and complete genome sequence of strain R.(Microbiology) [2007]
59
 C4LGM1_CORK4
(C4LGM1)		 
[query] 22 - 192 (210)
[subject] 33 - 204 (228)
 2e-32 143   49%
Product
RNA polymerase sigma factor
Gene
sigC
ckrop_0184
Organism
Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717)
1uniprot[Pubmed] 18430482
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids.(J. Biotechnol.) [2008]
61
 Q73YY9_MYCPA
(Q73YY9)		 
[query] 16 - 202 (210)
[subject] 275 - 455 (459)
 2e-32 142   50%
Product
Putative uncharacterized protein
Gene
MAP_1814
Organism
Mycobacterium paratuberculosis
1uniprot[Pubmed] 16116077
The complete genome sequence of Mycobacterium avium subspecies paratuberculosis.(Proc. Natl. Acad. Sci. U.S.A.) [2005]
62
 Q4JSN0_CORJK
(Q4JSN0)		 
[query] 18 - 192 (210)
[subject] 7 - 182 (205)
 3e-32 142   49%
Product
ECF-family sigma factor C
Gene
sigC
jk1995
Organism
Corynebacterium jeikeium (strain K411)
1uniprot[Pubmed] 15968079
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora.(J. Bacteriol.) [2005]
71
 Q8FTZ9_COREF
(Q8FTZ9)		 
[query] 22 - 200 (210)
[subject] 23 - 198 (202)
 4e-31 139   48%
Product
Putative RNA polymerase sigma factor
Gene
CE0223
Organism
Corynebacterium efficiens
1uniprot[Pubmed] 12840036 [Medline] 22723752
Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens.(Genome Res.) [2003]
72
 Q9CC01_MYCLE
(Q9CC01)		 
[query] 17 - 200 (210)
[subject] 1 - 178 (184)
 4e-31 138   51%
Product
RNA polymerase sigma factor
Gene
ML1448
Organism
Mycobacterium leprae
1uniprot[Pubmed] 11234002 [Medline] 21128732
Massive gene decay in the leprosy bacillus.(Nature) [2001]
73
 B8ZRM6_MYCLB
(B8ZRM6)		 
[query] 17 - 200 (210)
[subject] 1 - 178 (184)
 4e-31 138   51%
Product
RNA polymerase sigma factor
Gene
MLBr01448
Organism
Mycobacterium leprae (strain Br4923)
1uniprot[Pubmed] 19881526
Comparative genomic and phylogeographic analysis of Mycobacterium leprae.(Nat. Genet.) [2009]
74
 C3PJS1_CORA7
(C3PJS1)		 
[query] 22 - 192 (210)
[subject] 8 - 177 (182)
 1e-30 137   49%
Product
ECF-family sigma factor C
Gene
sigC
cauri_0193
Organism
Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1)
Corynebacterium nigricans
1uniprot[Pubmed] 20137072
Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion.(BMC Genomics) [2010]
78
 C1APY8_MYCBT
(C1APY8)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49%
Product
RNA polymerase sigma factor
Gene
sigC
JTY_2082
Organism
Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)
1uniprot[Pubmed] 19200449
Whole genome sequence analysis of Mycobacterium bovis bacillus Calmette-Guerin (BCG) Tokyo 172: a comparative study of BCG vaccine substrains.(Vaccine) [2009]
80
 A1KKB5_MYCBP
(A1KKB5)		 
[query] 18 - 200 (210)
[subject] 3 - 179 (185)
 4e-30 135   49%
Product
RNA polymerase sigma factor
Gene
sigC
BCG_2088
Organism
Mycobacterium bovis (strain BCG / Pasteur 1173P2)
1uniprot[Pubmed] 17372194
Genome plasticity of BCG and impact on vaccine efficacy.(Proc. Natl. Acad. Sci. U.S.A.) [2007]