BLAST table : Gelda2_00310

DBUniProtKB
accessionDBalignmentEvalueScoreIdent.linkproductgeneorganismec
1
 Q49BB8_STRHY
(Q49BB8)		 
[query] 1 - 210 (210)
[subject] 1 - 210 (210)
 1e-114 414   100% Putative sigma factor Streptomyces hygroscopicus
2
 E0KZD7_STRVO
(E0KZD7)		 
[query] 1 - 210 (210)
[subject] 1 - 210 (210)
 7e-98 360   98% RNA polymerase, sigma-24 subunit, ECF subfamily StrviDRAFT_8015 Streptomyces violaceusniger Tu 4113
3
 Q848B1_STRHY
(Q848B1)		 Jump to Gelda_00160 
[query] 1 - 210 (210)
[subject] 1 - 210 (210)
 3e-89 332   90% Putative ECF-family sigma factor gdnS Streptomyces hygroscopicus
4
 D9WW70_9ACTO
(D9WW70)		 
[query] 23 - 203 (210)
[subject] 10 - 190 (207)
 4e-62 241   73% RNA polymerase sigma factor SSOG_06240 Streptomyces himastatinicus ATCC 53653
5
 A3KIE8_STRAM
(A3KIE8)		 
[query] 23 - 206 (210)
[subject] 27 - 209 (213)
 2e-58 229   65% RNA polymerase sigma factor SAML0492 Streptomyces ambofaciens ATCC 23877
6
 E4MYV0_KITSK
(E4MYV0)		 
[query] 22 - 202 (210)
[subject] 31 - 211 (220)
 7e-57 224   66% RNA polymerase sigma factor KSE_70250 Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)
Streptomyces setae
7
 F3ND52_9ACTO
(F3ND52)		 
[query] 20 - 198 (210)
[subject] 8 - 186 (204)
 1e-56 223   63% ECF family RNA polymerase sigma factor SGM_1066 Streptomyces griseoaurantiacus M045
8
 C9Z3X6_STRSW
(C9Z3X6)		 
[query] 6 - 200 (210)
[subject] 2 - 196 (213)
 2e-55 219   59% RNA polymerase sigma factor SCAB_41571 Streptomyces scabies (strain 87.22)
Streptomyces scabiei
9
 Q82PK4_STRAW
(Q82PK4)		 
[query] 20 - 196 (210)
[subject] 17 - 193 (204)
 2e-55 219   63% RNA polymerase sigma factor sig10
SAV898
SAV_898		 Streptomyces avermitilis
10
 B5HT54_9ACTO
(B5HT54)		 
[query] 1 - 196 (210)
[subject] 21 - 212 (213)
 4e-55 218   59% RNA polymerase sigma factor SSEG_02771 Streptomyces sviceus ATCC 29083
11
 D6A485_9ACTO
(D6A485)		 
[query] 23 - 201 (210)
[subject] 34 - 212 (220)
 6e-54 214   61% RNA polymerase sigma factor SSFG_06875 Streptomyces ghanaensis ATCC 14672
12
 B1W4P0_STRGG
(B1W4P0)		 
[query] 22 - 180 (210)
[subject] 40 - 198 (230)
 2e-53 213   65% RNA polymerase sigma factor SGR_6228 Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
13
 D9XBU2_STRVR
(D9XBU2)		 
[query] 7 - 185 (210)
[subject] 4 - 182 (208)
 3e-53 212   61% RNA polymerase sigma factor SSQG_07163 Streptomyces viridochromogenes DSM 40736
14
 D2BF54_STRRD
(D2BF54)		 
[query] 15 - 203 (210)
[subject] 13 - 200 (200)
 3e-52 208   61% RNA polymerase sigma factor Sros_3479 Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)
15
 Q9RCU5_STRCO
(Q9RCU5)		 
[query] 23 - 203 (210)
[subject] 27 - 207 (213)
 6e-52 207   63% Probable ECF-family sigma factor SCO0866 Streptomyces coelicolor
16
 D6EWW3_STRLI
(D6EWW3)		 
[query] 23 - 203 (210)
[subject] 27 - 207 (213)
 7e-52 207   63% ECF family RNA polymerase sigma factor SSPG_06730 Streptomyces lividans TK24
17
 D6KDV1_9ACTO
(D6KDV1)		 
[query] 20 - 205 (210)
[subject] 13 - 198 (200)
 2e-50 202   56% RNA polymerase sigma-70 factor, ECF subfamily SSTG_05126 Streptomyces sp. e14
18
 D9Y1Z3_9ACTO
(D9Y1Z3)		 
[query] 1 - 207 (210)
[subject] 1 - 199 (204)
 2e-50 202   58% RNA polymerase sigma factor SSRG_05790 Streptomyces griseoflavus Tu4000
19
 D9UPH3_9ACTO
(D9UPH3)		 
[query] 3 - 203 (210)
[subject] 4 - 206 (213)
 1e-49 200   59% RNA polymerase sigma factor SSLG_00079 Streptomyces sp. SPB78
20
 D9WJ79_9ACTO
(D9WJ79)		 
[query] 33 - 201 (210)
[subject] 14 - 182 (189)
 1e-49 200   60% RNA polymerase sigma factor SSOG_08890 Streptomyces himastatinicus ATCC 53653
21
 F2R4I7_STRVP
(F2R4I7)		 
[query] 34 - 203 (210)
[subject] 40 - 209 (234)
 2e-49 199   60% RNA polymerase sigma factor SVEN_0176 Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
22
 Q9RCU7_STRCO
(Q9RCU7)		 
[query] 21 - 189 (210)
[subject] 8 - 176 (198)
 6e-49 197   64% Probable ECF-family sigma factor SCO0864 Streptomyces coelicolor
23
 D6EWW5_STRLI
(D6EWW5)		 
[query] 21 - 189 (210)
[subject] 19 - 187 (209)
 6e-49 197   64% ECF family RNA polymerase sigma factor SSPG_06732 Streptomyces lividans TK24
24
 Q82QA6_STRAW
(Q82QA6)		 
[query] 36 - 209 (210)
[subject] 43 - 216 (217)
 2e-48 196   61% RNA polymerase sigma factor sig5
SAV614
SAV_614		 Streptomyces avermitilis
25
 D7BV48_STRBB
(D7BV48)		 
[query] 26 - 209 (210)
[subject] 18 - 206 (214)
 4e-48 195   66% RNA polymerase sigma factor sig9
SBI_02306		 Streptomyces bingchenggensis (strain BCW-1)
26
 B5GY45_STRCL
(B5GY45)		 
[query] 13 - 192 (210)
[subject] 22 - 201 (215)
 4e-47 192   62% RNA polymerase sigma factor SSCG_04232 Streptomyces clavuligerus ATCC 27064
27
 E2PUP7_STRCL
(E2PUP7)		 
[query] 13 - 192 (210)
[subject] 33 - 212 (226)
 6e-47 191   62% RNA polymerase sigma factor SCLAV_2754 Streptomyces clavuligerus ATCC 27064
28
 F1D8X4_9ACTO
(F1D8X4)		 
[query] 12 - 201 (210)
[subject] 16 - 204 (231)
 1e-46 190   59% RNA polymerase sigma factor Streptomyces sp. MJM7001
29
 E9KTF7_9ACTO
(E9KTF7)		 
[query] 12 - 201 (210)
[subject] 16 - 204 (231)
 1e-46 190   59% RNA polymerase sigma factor Tcs_11604BP_003 Streptomyces sp. KCTC 11604BP
30
 E8W4X7_STRFA
(E8W4X7)		 
[query] 7 - 196 (210)
[subject] 15 - 207 (255)
 7e-46 187   58% RNA polymerase sigma factor Sfla_0340 Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD)
31
 A4FP16_SACEN
(A4FP16)		 
[query] 19 - 194 (210)
[subject] 4 - 174 (184)
 5e-44 181   60% RNA polymerase sigma factor sigC
SACE_6625		 Saccharopolyspora erythraea (strain NRRL 23338)
32
 C6WP37_ACTMD
(C6WP37)		 
[query] 11 - 192 (210)
[subject] 1 - 179 (192)
 2e-42 176   55% RNA polymerase, sigma-24 subunit, ECF subfamily Amir_2773 Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
33
 A8M5Q2_SALAI
(A8M5Q2)		 
[query] 22 - 196 (210)
[subject] 3 - 172 (188)
 8e-41 171   55% RNA polymerase sigma factor Sare_2785 Salinispora arenicola (strain CNS-205)
34
 A4X831_SALTO
(A4X831)		 
[query] 1 - 198 (210)
[subject] 11 - 204 (216)
 3e-40 169   51% RNA polymerase sigma factor Strop_2587 Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)
35
 D8HYW3_AMYMU
(D8HYW3)		 
[query] 21 - 197 (210)
[subject] 37 - 212 (222)
 5e-40 168   54% RNA polymerase sigma factor rpoE
AMED_6529		 Amycolatopsis mediterranei (strain U-32)
36
 C4RBD5_9ACTO
(C4RBD5)		 
[query] 19 - 207 (210)
[subject] 10 - 196 (198)
 6e-39 164   53% Sigma-70 region 4 domain-containing protein MCAG_00025 Micromonospora sp. ATCC 39149
37
 D2K2C6_9MYCO
(D2K2C6)		 
[query] 3 - 194 (210)
[subject] 4 - 204 (235)
 3e-38 162   50% RNA polymerase sigma factor sigC Mycobacterium chubuense NBB4
38
 D8I197_AMYMU
(D8I197)		 
[query] 22 - 192 (210)
[subject] 6 - 173 (183)
 4e-38 162   58% RNA polymerase sigma factor rpoE
AMED_2991		 Amycolatopsis mediterranei (strain U-32)
39
 D8HYW4_AMYMU
(D8HYW4)		 
[query] 22 - 194 (210)
[subject] 8 - 181 (190)
 1e-37 160   54% RNA polymerase sigma-70 factor, ECF subfamily rpoE
AMED_6530		 Amycolatopsis mediterranei (strain U-32)
40
 D9V5P5_9ACTO
(D9V5P5)		 
[query] 22 - 192 (210)
[subject] 8 - 178 (189)
 2e-37 159   53% RNA polymerase sigma factor SSMG_02824 Streptomyces sp. AA4
41
 D9VFK0_9ACTO
(D9VFK0)		 
[query] 6 - 206 (210)
[subject] 49 - 252 (252)
 2e-37 159   50% RNA polymerase sigma factor RpoE SSMG_03804 Streptomyces sp. AA4
42
 D9TBE1_MICAI
(D9TBE1)		 
[query] 22 - 194 (210)
[subject] 5 - 175 (187)
 2e-36 156   55% RNA polymerase sigma factor Micau_3015 Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)
43
 E8SAJ5_MICSL
(E8SAJ5)		 
[query] 19 - 194 (210)
[subject] 2 - 175 (187)
 6e-36 154   55% RNA polymerase sigma factor ML5_5372 Micromonospora sp. (strain L5)
44
 B1ME35_MYCA9
(B1ME35)		 
[query] 19 - 210 (210)
[subject] 3 - 183 (183)
 6e-35 151   49% RNA polymerase sigma factor MAB_3428c Mycobacterium abscessus (strain ATCC 19977 / DSM 44196)
45
 B2HKM8_MYCMM
(B2HKM8)		 
[query] 17 - 192 (210)
[subject] 1 - 173 (184)
 1e-34 150   52% RNA polymerase sigma factor sigC_1
MMAR_0265		 Mycobacterium marinum (strain ATCC BAA-535 / M)
46
 A0PWN1_MYCUA
(A0PWN1)		 
[query] 17 - 192 (210)
[subject] 1 - 173 (184)
 1e-34 150   52% RNA polymerase sigma factor sigC_1
MUL_4849		 Mycobacterium ulcerans (strain Agy99)
47
 D7B4I7_NOCDD
(D7B4I7)		 
[query] 22 - 198 (210)
[subject] 104 - 274 (274)
 6e-34 148   51% RNA polymerase, sigma-24 subunit, ECF subfamily Ndas_3581 Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488)
Actinomadura dassonvillei
48
 D6ZAB3_SEGRD
(D6ZAB3)		 
[query] 36 - 210 (210)
[subject] 33 - 206 (206)
 7e-34 148   50% RNA polymerase, sigma-24 subunit, ECF subfamily Srot_0166 Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)
49
 F5YTW3_9MYCO
(F5YTW3)		 
[query] 21 - 201 (210)
[subject] 283 - 457 (462)
 1e-33 147   51% RNA polymerase sigma factor sigC
JDM601_0986		 Mycobacterium sp. JDM601
50
 A0QFD5_MYCA1
(A0QFD5)		 
[query] 16 - 201 (210)
[subject] 217 - 396 (401)
 2e-32 143   50% RNA polymerase sigma factor MAV_2426 Mycobacterium avium (strain 104)
51
 F4FET8_VERMA
(F4FET8)		 
[query] 19 - 196 (210)
[subject] 2 - 177 (192)
 6e-32 141   52% RNA polymerase sigma factor VAB18032_06790 Verrucosispora maris (strain AB-18-032)
52
 Q73YY9_MYCPA
(Q73YY9)		 
[query] 16 - 202 (210)
[subject] 275 - 455 (459)
 1e-31 140   49% Putative uncharacterized protein MAP_1814 Mycobacterium paratuberculosis
53
 F7P1W7_MYCPA
(F7P1W7)		 
[query] 16 - 202 (210)
[subject] 275 - 455 (459)
 2e-31 140   49% RNA polymerase sigma factor, sigma-70 family MAPs_24630 Mycobacterium avium subsp. paratuberculosis S397
54
 C4LGM1_CORK4
(C4LGM1)		 
[query] 22 - 192 (210)
[subject] 33 - 204 (228)
 2e-31 139   48% RNA polymerase sigma factor sigC
ckrop_0184		 Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717)
55
 B1VI44_CORU7
(B1VI44)		 
[query] 15 - 192 (210)
[subject] 12 - 189 (220)
 2e-31 139   48% ECF-family sigma factor C sigC
cu1885		 Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109)
56
 C2GJD6_9CORY
(C2GJD6)		 
[query] 22 - 192 (210)
[subject] 3 - 167 (169)
 3e-31 139   47% RNA polymerase sigma factor HMPREF0293_2029 Corynebacterium glucuronolyticum ATCC 51866
57
 C0VRJ6_9CORY
(C0VRJ6)		 
[query] 22 - 192 (210)
[subject] 3 - 167 (169)
 3e-31 139   47% RNA polymerase sigma factor HMPREF0294_0438 Corynebacterium glucuronolyticum ATCC 51867
58
 E5XPW1_9ACTO
(E5XPW1)		 
[query] 36 - 210 (210)
[subject] 20 - 193 (193)
 3e-31 139   48% Sigma-70 family RNA polymerase sigma factor HMPREF9336_01533 Segniliparus rugosus ATCC BAA-974
59
 D5NVD8_CORAM
(D5NVD8)		 
[query] 22 - 192 (210)
[subject] 35 - 204 (208)
 3e-31 139   47% RNA polymerase sigma-70 factor, ECF subfamily HMPREF0281_00542 Corynebacterium ammoniagenes DSM 20306
60
 E2S5U7_9CORY
(E2S5U7)		 
[query] 19 - 194 (210)
[subject] 5 - 177 (180)
 5e-31 138   49% RNA polymerase sigma-70 factor sigC
HMPREF0305_11838		 Corynebacterium pseudogenitalium ATCC 33035
61
 C6R7L0_9CORY
(C6R7L0)		 
[query] 19 - 194 (210)
[subject] 5 - 177 (180)
 7e-31 137   49% RNA polymerase sigma factor CORTU0001_0901 Corynebacterium tuberculostearicum SK141
62
 F4D1Q9_9PSEU
(F4D1Q9)		 
[query] 22 - 196 (210)
[subject] 6 - 175 (184)
 5e-30 135   52% RNA polymerase, sigma-24 subunit, ECF subfamily Psed_5845 Pseudonocardia dioxanivorans CB1190
63
 Q9CC01_MYCLE
(Q9CC01)		 
[query] 20 - 201 (210)
[subject] 4 - 179 (184)
 6e-30 134   51% RNA polymerase sigma factor ML1448 Mycobacterium leprae
64
 B8ZRM6_MYCLB
(B8ZRM6)		 
[query] 20 - 201 (210)
[subject] 4 - 179 (184)
 6e-30 134   51% RNA polymerase sigma factor MLBr01448 Mycobacterium leprae (strain Br4923)
65
 Q4JSN0_CORJK
(Q4JSN0)		 
[query] 18 - 195 (210)
[subject] 7 - 185 (205)
 8e-30 134   47% ECF-family sigma factor C sigC
jk1995		 Corynebacterium jeikeium (strain K411)
66
 Q8NTQ2_CORGL
(Q8NTQ2)		 
[query] 22 - 204 (210)
[subject] 7 - 186 (193)
 9e-30 134   48% DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs
Sigma-70 factor (ECF subfamily)		 sigC
Cgl0254
cg0309		 Corynebacterium glutamicum
Brevibacterium flavum
67
 C8RV42_CORJE
(C8RV42)		 
[query] 18 - 195 (210)
[subject] 7 - 185 (206)
 9e-30 134   47% RNA polymerase sigma-70 factor, ECF subfamily sigC
HMPREF0297_1894		 Corynebacterium jeikeium ATCC 43734
68
 D5P4Q7_9MYCO
(D5P4Q7)		 
[query] 20 - 185 (210)
[subject] 276 - 438 (457)
 1e-29 134   51% RNA polymerase sigma factor sigC
HMPREF0591_1151		 Mycobacterium parascrofulaceum ATCC BAA-614
69
 A4QAP8_CORGB
(A4QAP8)		 
[query] 22 - 204 (210)
[subject] 7 - 186 (193)
 2e-29 133   48% Putative uncharacterized protein cgR_0331 Corynebacterium glutamicum (strain R)
70
 C1APY8_MYCBT
(C1APY8)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor sigC
JTY_2082		 Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)
71
 A5U494_MYCTA
(A5U494)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor sigC
MRA_2083		 Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
72
 A1KKB5_MYCBP
(A1KKB5)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor sigC
BCG_2088		 Mycobacterium bovis (strain BCG / Pasteur 1173P2)
73
 F8LZW1_9MYCO
(F8LZW1)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% Putative RNA polymerase sigma factor, ECF subfamily, SIGC sigC
MAF_20840		 Mycobacterium africanum GM041182
74
 F7WSC7_MYCTU
(F7WSC7)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% ECF subfamily RNA polymerase sigma factor CCDC5180_1889 Mycobacterium tuberculosis CCDC5180
75
 F7WD65_MYCTU
(F7WD65)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% ECF subfamily RNA polymerase sigma factor CCDC5079_1913 Mycobacterium tuberculosis CCDC5079
76
 F2VBX1_MYCTU
(F2VBX1)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TBPG_01561 Mycobacterium tuberculosis W-148
77
 E9ZKI1_MYCTU
(E9ZKI1)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMMG_01343 Mycobacterium tuberculosis CDC1551A
78
 E2WIP1_MYCTU
(E2WIP1)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMLG_03562 Mycobacterium tuberculosis SUMu012
79
 E2W6Q3_MYCTU
(E2W6Q3)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMKG_00328 Mycobacterium tuberculosis SUMu011
80
 E2VVH7_MYCTU
(E2VVH7)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMJG_00327 Mycobacterium tuberculosis SUMu010
81
 E2VJ66_MYCTU
(E2VJ66)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMIG_00734 Mycobacterium tuberculosis SUMu009
82
 E2V9V2_MYCTU
(E2V9V2)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMHG_01256 Mycobacterium tuberculosis SUMu008
83
 E2UZN8_MYCTU
(E2UZN8)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMGG_00624 Mycobacterium tuberculosis SUMu007
84
 E2UME1_MYCTU
(E2UME1)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMFG_01025 Mycobacterium tuberculosis SUMu006
85
 E2UAU7_MYCTU
(E2UAU7)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMEG_02434 Mycobacterium tuberculosis SUMu005
86
 E2TZG6_MYCTU
(E2TZG6)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMDG_00548 Mycobacterium tuberculosis SUMu004
87
 E2TMY4_MYCTU
(E2TMY4)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMCG_00165 Mycobacterium tuberculosis SUMu003
88
 E2TAI9_MYCTU
(E2TAI9)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMBG_00616 Mycobacterium tuberculosis SUMu002
89
 E1HAM7_MYCTU
(E1HAM7)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TMAG_02252 Mycobacterium tuberculosis SUMu001
90
 D7ESF8_MYCTU
(D7ESF8)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TBAG_00991 Mycobacterium tuberculosis 94_M4241A
91
 D5ZIS4_MYCTU
(D5ZIS4)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TBJG_00546 Mycobacterium tuberculosis T17
92
 D5Z4T3_MYCTU
(D5Z4T3)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TBIG_01463 Mycobacterium tuberculosis GM 1503
93
 D5XUI3_MYCTU
(D5XUI3)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% RNA polymerase sigma factor TBDG_00873 Mycobacterium tuberculosis T92
94
 RPSC_MYCTU
(P66809)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% Probable RNA polymerase sigma-C factor sigC
Rv2069
MT2129
MTCY49.08		 Mycobacterium tuberculosis
95
 RPSC_MYCBO
(P66810)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49% Probable RNA polymerase sigma-C factor sigC
Mb2095		 Mycobacterium bovis
96
 D6FVU7_MYCTU
(D6FVU7)		 
[query] 19 - 200 (210)
[subject] 41 - 216 (222)
 3e-29 132   49% RNA polymerase sigma factor TBOG_02592 Mycobacterium tuberculosis K85
97
 D5Y4R0_MYCTU
(D5Y4R0)		 
[query] 19 - 200 (210)
[subject] 41 - 216 (222)
 3e-29 132   49% RNA polymerase sigma factor TBEG_00868 Mycobacterium tuberculosis T85
98
 A4KIK6_MYCTU
(A4KIK6)		 
[query] 19 - 200 (210)
[subject] 41 - 216 (222)
 3e-29 132   49% RNA polymerase sigma factor TBHG_02027 Mycobacterium tuberculosis str. Haarlem
99
 A2VJH5_MYCTU
(A2VJH5)		 
[query] 19 - 200 (210)
[subject] 41 - 216 (222)
 3e-29 132   49% RNA polymerase sigma factor TBCG_02021 Mycobacterium tuberculosis C
100
 D7WBF1_9CORY
(D7WBF1)		 
[query] 22 - 198 (210)
[subject] 5 - 180 (185)
 4e-29 132   49% RNA polymerase sigma-70 factor sigC
HMPREF0291_10440		 Corynebacterium genitalium ATCC 33030
accessionDBalignmentEvalueScoreIdent.linkinformationpubmed
1
 Q49BB8_STRHY
(Q49BB8)		 
[query] 1 - 210 (210)
[subject] 1 - 210 (210)
 1e-114 414   100%
Product
Putative sigma factor
Gene
 
Organism
Streptomyces hygroscopicus
1uniprot[Pubmed] 16085885
Insights into the biosynthesis of the benzoquinone ansamycins geldanamycin and herbimycin, obtained by gene sequencing and disruption.(Appl. Environ. Microbiol.) [2005]
5
 A3KIE8_STRAM
(A3KIE8)		 
[query] 23 - 206 (210)
[subject] 27 - 209 (213)
 2e-58 229   65%
Product
RNA polymerase sigma factor
Gene
SAML0492
Organism
Streptomyces ambofaciens ATCC 23877
1uniprot[Pubmed] 16956972
Evolution of the terminal regions of the Streptomyces linear chromosome.(Mol. Biol. Evol.) [2006]
6
 E4MYV0_KITSK
(E4MYV0)		 
[query] 22 - 202 (210)
[subject] 31 - 211 (220)
 7e-57 224   66%
Product
RNA polymerase sigma factor
Gene
KSE_70250
Organism
Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)
Streptomyces setae
1uniprot[Pubmed] 21059706
Genome sequence of Kitasatospora setae NBRC 14216T: an evolutionary snapshot of the family Streptomycetaceae.(DNA Res.) [2010]
7
 F3ND52_9ACTO
(F3ND52)		 
[query] 20 - 198 (210)
[subject] 8 - 186 (204)
 1e-56 223   63%
Product
ECF family RNA polymerase sigma factor
Gene
SGM_1066
Organism
Streptomyces griseoaurantiacus M045
1uniprot[Pubmed] 21551298
Draft Genome Sequence of the Marine Bacterium Streptomyces griseoaurantiacus M045, Which Produces Novel Manumycin-Type Antibiotics with a pABA Core Component.(J. Bacteriol.) [2011]
8
 C9Z3X6_STRSW
(C9Z3X6)		 
[query] 6 - 200 (210)
[subject] 2 - 196 (213)
 2e-55 219   59%
Product
RNA polymerase sigma factor
Gene
SCAB_41571
Organism
Streptomyces scabies (strain 87.22)
Streptomyces scabiei
1uniprot[Pubmed] 20064060
Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions.(Mol. Plant Microbe Interact.) [2010]
9
 Q82PK4_STRAW
(Q82PK4)		 
[query] 20 - 196 (210)
[subject] 17 - 193 (204)
 2e-55 219   63%
Product
RNA polymerase sigma factor
Gene
sig10
SAV898
SAV_898
Organism
Streptomyces avermitilis
1uniprot[Pubmed] 11572948 [Medline] 21477403
Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites.(Proc. Natl. Acad. Sci. U.S.A.) [2001]
12
 B1W4P0_STRGG
(B1W4P0)		 
[query] 22 - 180 (210)
[subject] 40 - 198 (230)
 2e-53 213   65%
Product
RNA polymerase sigma factor
Gene
SGR_6228
Organism
Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
1uniprot[Pubmed] 18375553
Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350.(J. Bacteriol.) [2008]
14
 D2BF54_STRRD
(D2BF54)		 
[query] 15 - 203 (210)
[subject] 13 - 200 (200)
 3e-52 208   61%
Product
RNA polymerase sigma factor
Gene
Sros_3479
Organism
Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)
1uniprot
Complete genome sequence of Streptosporangium roseum type strain (NI 9100T).(Stand. Genomic Sci.) [2010]
15
 Q9RCU5_STRCO
(Q9RCU5)		 
[query] 23 - 203 (210)
[subject] 27 - 207 (213)
 6e-52 207   63%
Product
Probable ECF-family sigma factor
Gene
SCO0866
Organism
Streptomyces coelicolor
1uniprot[Pubmed] 12000953 [Medline] 21996410
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).(Nature) [2002]
21
 F2R4I7_STRVP
(F2R4I7)		 
[query] 34 - 203 (210)
[subject] 40 - 209 (234)
 2e-49 199   60%
Product
RNA polymerase sigma factor
Gene
SVEN_0176
Organism
Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
1uniprot[Pubmed] 21463507
Genome-wide analysis of the role of GlnR in Streptomyces venezuelae provides new insights into global nitrogen regulation in actinomycetes.(BMC Genomics) [2011]
22
 Q9RCU7_STRCO
(Q9RCU7)		 
[query] 21 - 189 (210)
[subject] 8 - 176 (198)
 6e-49 197   64%
Product
Probable ECF-family sigma factor
Gene
SCO0864
Organism
Streptomyces coelicolor
1uniprot[Pubmed] 12000953 [Medline] 21996410
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).(Nature) [2002]
24
 Q82QA6_STRAW
(Q82QA6)		 
[query] 36 - 209 (210)
[subject] 43 - 216 (217)
 2e-48 196   61%
Product
RNA polymerase sigma factor
Gene
sig5
SAV614
SAV_614
Organism
Streptomyces avermitilis
1uniprot[Pubmed] 11572948 [Medline] 21477403
Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites.(Proc. Natl. Acad. Sci. U.S.A.) [2001]
25
 D7BV48_STRBB
(D7BV48)		 
[query] 26 - 209 (210)
[subject] 18 - 206 (214)
 4e-48 195   66%
Product
RNA polymerase sigma factor
Gene
sig9
SBI_02306
Organism
Streptomyces bingchenggensis (strain BCW-1)
1uniprot[Pubmed] 20581206
Genome sequence of the milbemycin-producing bacterium Streptomyces bingchenggensis.(J. Bacteriol.) [2010]
27
 E2PUP7_STRCL
(E2PUP7)		 
[query] 13 - 192 (210)
[subject] 33 - 212 (226)
 6e-47 191   62%
Product
RNA polymerase sigma factor
Gene
SCLAV_2754
Organism
Streptomyces clavuligerus ATCC 27064
1uniprot[Pubmed] 20624727
The sequence of a 1.8-mb bacterial linear plasmid reveals a rich evolutionary reservoir of secondary metabolic pathways.(Genome Biol. Evol.) [2010]
29
 E9KTF7_9ACTO
(E9KTF7)		 
[query] 12 - 201 (210)
[subject] 16 - 204 (231)
 1e-46 190   59%
Product
RNA polymerase sigma factor
Gene
Tcs_11604BP_003
Organism
Streptomyces sp. KCTC 11604BP
1uniprot[Pubmed] 21175203
Biosynthesis of the allylmalonyl-CoA extender unit for the FK506 polyketide synthase proceeds through a dedicated polyketide synthase and facilitates the mutasynthesis of analogues.(J. Am. Chem. Soc.) [2011]
31
 A4FP16_SACEN
(A4FP16)		 
[query] 19 - 194 (210)
[subject] 4 - 174 (184)
 5e-44 181   60%
Product
RNA polymerase sigma factor
Gene
sigC
SACE_6625
Organism
Saccharopolyspora erythraea (strain NRRL 23338)
1uniprot[Pubmed] 17369815
Complete genome sequence of the erythromycin-producing bacterium Saccharopolyspora erythraea NRRL23338.(Nat. Biotechnol.) [2007]
32
 C6WP37_ACTMD
(C6WP37)		 
[query] 11 - 192 (210)
[subject] 1 - 179 (192)
 2e-42 176   55%
Product
RNA polymerase, sigma-24 subunit, ECF subfamily
Gene
Amir_2773
Organism
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
1uniprot
Complete genome sequence of Actinosynnema mirum type strain (101).(Stand. Genomic Sci.) [2009]
35
 D8HYW3_AMYMU
(D8HYW3)		 
[query] 21 - 197 (210)
[subject] 37 - 212 (222)
 5e-40 168   54%
Product
RNA polymerase sigma factor
Gene
rpoE
AMED_6529
Organism
Amycolatopsis mediterranei (strain U-32)
1uniprot[Pubmed] 20567260
Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism.(Cell Res.) [2010]
37
 D2K2C6_9MYCO
(D2K2C6)		 
[query] 3 - 194 (210)
[subject] 4 - 204 (235)
 3e-38 162   50%
Product
RNA polymerase sigma factor
Gene
sigC
Organism
Mycobacterium chubuense NBB4
1uniprot
Untangling the multiple monooxygenases of Mycobacterium chubuense strain NBB4, a versatile hydrocarbon degrader.(Environ Microbiol Rep) [2010]
38
 D8I197_AMYMU
(D8I197)		 
[query] 22 - 192 (210)
[subject] 6 - 173 (183)
 4e-38 162   58%
Product
RNA polymerase sigma factor
Gene
rpoE
AMED_2991
Organism
Amycolatopsis mediterranei (strain U-32)
1uniprot[Pubmed] 20567260
Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism.(Cell Res.) [2010]
39
 D8HYW4_AMYMU
(D8HYW4)		 
[query] 22 - 194 (210)
[subject] 8 - 181 (190)
 1e-37 160   54%
Product
RNA polymerase sigma-70 factor, ECF subfamily
Gene
rpoE
AMED_6530
Organism
Amycolatopsis mediterranei (strain U-32)
1uniprot[Pubmed] 20567260
Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism.(Cell Res.) [2010]
45
 B2HKM8_MYCMM
(B2HKM8)		 
[query] 17 - 192 (210)
[subject] 1 - 173 (184)
 1e-34 150   52%
Product
RNA polymerase sigma factor
Gene
sigC_1
MMAR_0265
Organism
Mycobacterium marinum (strain ATCC BAA-535 / M)
1uniprot[Pubmed] 18403782
Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis.(Genome Res.) [2008]
46
 A0PWN1_MYCUA
(A0PWN1)		 
[query] 17 - 192 (210)
[subject] 1 - 173 (184)
 1e-34 150   52%
Product
RNA polymerase sigma factor
Gene
sigC_1
MUL_4849
Organism
Mycobacterium ulcerans (strain Agy99)
1uniprot[Pubmed] 17210928
Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer.(Genome Res.) [2007]
47
 D7B4I7_NOCDD
(D7B4I7)		 
[query] 22 - 198 (210)
[subject] 104 - 274 (274)
 6e-34 148   51%
Product
RNA polymerase, sigma-24 subunit, ECF subfamily
Gene
Ndas_3581
Organism
Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488)
Actinomadura dassonvillei
1uniprot
Complete genome sequence of Nocardiopsis dassonvillei type strain (IMRU 509T).(Stand. Genomic Sci.) [2010]
48
 D6ZAB3_SEGRD
(D6ZAB3)		 
[query] 36 - 210 (210)
[subject] 33 - 206 (206)
 7e-34 148   50%
Product
RNA polymerase, sigma-24 subunit, ECF subfamily
Gene
Srot_0166
Organism
Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)
1uniprot
Complete genome sequence of Segniliparus rotundus type strain (CDC 1076T).(Stand. Genomic Sci.) [2010]
51
 F4FET8_VERMA
(F4FET8)		 
[query] 19 - 196 (210)
[subject] 2 - 177 (192)
 6e-32 141   52%
Product
RNA polymerase sigma factor
Gene
VAB18032_06790
Organism
Verrucosispora maris (strain AB-18-032)
1uniprot[Pubmed] 21551311
Genome sequence of the abyssomicin- and proximicin-producing marine actinomycete Verrucosispora maris AB-18-032.(J. Bacteriol.) [2011]
52
 Q73YY9_MYCPA
(Q73YY9)		 
[query] 16 - 202 (210)
[subject] 275 - 455 (459)
 1e-31 140   49%
Product
Putative uncharacterized protein
Gene
MAP_1814
Organism
Mycobacterium paratuberculosis
1uniprot[Pubmed] 16116077
The complete genome sequence of Mycobacterium avium subspecies paratuberculosis.(Proc. Natl. Acad. Sci. U.S.A.) [2005]
54
 C4LGM1_CORK4
(C4LGM1)		 
[query] 22 - 192 (210)
[subject] 33 - 204 (228)
 2e-31 139   48%
Product
RNA polymerase sigma factor
Gene
sigC
ckrop_0184
Organism
Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717)
1uniprot[Pubmed] 18430482
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids.(J. Biotechnol.) [2008]
55
 B1VI44_CORU7
(B1VI44)		 
[query] 15 - 192 (210)
[subject] 12 - 189 (220)
 2e-31 139   48%
Product
ECF-family sigma factor C
Gene
sigC
cu1885
Organism
Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109)
1uniprot[Pubmed] 18367281
The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing.(J. Biotechnol.) [2008]
63
 Q9CC01_MYCLE
(Q9CC01)		 
[query] 20 - 201 (210)
[subject] 4 - 179 (184)
 6e-30 134   51%
Product
RNA polymerase sigma factor
Gene
ML1448
Organism
Mycobacterium leprae
1uniprot[Pubmed] 11234002 [Medline] 21128732
Massive gene decay in the leprosy bacillus.(Nature) [2001]
64
 B8ZRM6_MYCLB
(B8ZRM6)		 
[query] 20 - 201 (210)
[subject] 4 - 179 (184)
 6e-30 134   51%
Product
RNA polymerase sigma factor
Gene
MLBr01448
Organism
Mycobacterium leprae (strain Br4923)
1uniprot[Pubmed] 19881526
Comparative genomic and phylogeographic analysis of Mycobacterium leprae.(Nat. Genet.) [2009]
65
 Q4JSN0_CORJK
(Q4JSN0)		 
[query] 18 - 195 (210)
[subject] 7 - 185 (205)
 8e-30 134   47%
Product
ECF-family sigma factor C
Gene
sigC
jk1995
Organism
Corynebacterium jeikeium (strain K411)
1uniprot[Pubmed] 15968079
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora.(J. Bacteriol.) [2005]
66
 Q8NTQ2_CORGL
(Q8NTQ2)		 
[query] 22 - 204 (210)
[subject] 7 - 186 (193)
 9e-30 134   48%
Product
DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs
Sigma-70 factor (ECF subfamily)
Gene
sigC
Cgl0254
cg0309
Organism
Corynebacterium glutamicum
Brevibacterium flavum
1uniprot[Pubmed] 12948626 [Medline] 22830012
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.(J. Biotechnol.) [2003]
69
 A4QAP8_CORGB
(A4QAP8)		 
[query] 22 - 204 (210)
[subject] 7 - 186 (193)
 2e-29 133   48%
Product
Putative uncharacterized protein
Gene
cgR_0331
Organism
Corynebacterium glutamicum (strain R)
1uniprot[Pubmed] 17379713
Comparative analysis of the Corynebacterium glutamicum group and complete genome sequence of strain R.(Microbiology) [2007]
70
 C1APY8_MYCBT
(C1APY8)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49%
Product
RNA polymerase sigma factor
Gene
sigC
JTY_2082
Organism
Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)
1uniprot[Pubmed] 19200449
Whole genome sequence analysis of Mycobacterium bovis bacillus Calmette-Guerin (BCG) Tokyo 172: a comparative study of BCG vaccine substrains.(Vaccine) [2009]
72
 A1KKB5_MYCBP
(A1KKB5)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49%
Product
RNA polymerase sigma factor
Gene
sigC
BCG_2088
Organism
Mycobacterium bovis (strain BCG / Pasteur 1173P2)
1uniprot[Pubmed] 17372194
Genome plasticity of BCG and impact on vaccine efficacy.(Proc. Natl. Acad. Sci. U.S.A.) [2007]
94
 RPSC_MYCTU
(P66809)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49%
Product
Probable RNA polymerase sigma-C factor
Gene
sigC
Rv2069
MT2129
MTCY49.08
Organism
Mycobacterium tuberculosis
1uniprot[Pubmed] 9634230 [Medline] 98295987
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.(Nature) [1998]
2uniprot[Pubmed] 12218036 [Medline] 22206494
Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains.(J. Bacteriol.) [2002]
3uniprot[Pubmed] 19099550
targetTB: a target identification pipeline for Mycobacterium tuberculosis through an interactome, reactome and genome-scale structural analysis.(BMC Syst. Biol.) [2008]
4uniprot[Pubmed] 19118359
Experimental determination of translational start sites resolves uncertainties in genomic open reading frame predictions - application to Mycobacterium tuberculosis.(Microbiology) [2009]
[pubmed all]
95
 RPSC_MYCBO
(P66810)		 
[query] 19 - 200 (210)
[subject] 4 - 179 (185)
 3e-29 132   49%
Product
Probable RNA polymerase sigma-C factor
Gene
sigC
Mb2095
Organism
Mycobacterium bovis
1uniprot[Pubmed] 12788972 [Medline] 22709107
The complete genome sequence of Mycobacterium bovis.(Proc. Natl. Acad. Sci. U.S.A.) [2003]