MUP_00050 : CDS information

Location

Organism	Mycobacterium ulcerans
Strain	Agy99
Entry name	Mycolactone
Contig	BX649209
Start / Stop / Direction	3,901 / 2,921 / - [in whole cluster] 3,901 / 2,921 / - [in contig]
Location	complement(2921..3901) [in whole cluster] complement(2921..3901) [in contig]
Type	CDS
Length	981 bp (326 aa)

Annotation

Category
Product
Product (GenBank)	possible chromosome partitioning protein ParA
Gene
Gene (GenBank)	parA
EC number
Keyword
Note
Note (GenBank)	MUP005c, parA, len: 326 aa. Possible parA, chromosome partitioning protein, similar to several e.g. O05189\|PARA_CAUCR Chromosome partitioning protein parA from Caulobacter crescentus (267 aa), fasta scores: opt: 279, E(): 4.3e-10, (29.918% identity in 244 aa overlap); Q8G6J3\|AAN24469 Chromosome partitioning protein P from Bifidobacterium longum (336 aa), fasta scores: opt: 324, E(): 7.3e-13, (30.085% identity in 236 aa overlap) and Q8KBD6 ATPase, ParA family from Chlorobium tepidum (265 aa), fasta scores: opt: 285, E(): 1.8e-10, (28.807% identity in 243 aa overlap). Contains a Pfam match to entry PF00991, ParA family ATPase.

Sequence

>[possible chromosome partitioning protein ParA]
MSRSVAVWDDAGLVEPAVNWSKLGNVYLFANGKGGVGKSTCSTHSAALVASDGARALLVD
LNGQGNVANMLGFANTEADDKGRNLYSAITAGAALTPIPDVRPGLDVVPGGPFVRRIAPV
MAAEMGNPQTAKQVLMSLALALAQISDHYGVIFIDSPPENQLLLQAALCASRFVVVPMKT
DDLSRTGLRELAGDLRAMREHNPSVVLLGCFVFASGTSSTRIREEMKKNVAADLGQNDDV
MLDSFIRHSEAVGRDVPKFGRLAHELEQEIVNNPSRSAIRQGRADATTVVSTTSVSVAED
FAKLTGEILTRGSKIRQDLINEGVWP

>[possible chromosome partitioning protein ParA]
ATGAGTAGAAGCGTAGCCGTTTGGGACGACGCTGGGCTGGTAGAACCCGCGGTCAATTGG
AGCAAGCTGGGCAATGTTTATCTGTTCGCCAACGGCAAGGGTGGGGTAGGGAAGTCGACG
TGTTCTACCCACAGCGCCGCGCTCGTTGCCTCCGATGGAGCGCGCGCCTTATTGGTCGAT
CTCAACGGCCAGGGCAACGTGGCGAACATGCTTGGCTTCGCGAATACAGAAGCCGACGAC
AAGGGTAGGAATCTCTACAGCGCGATTACTGCCGGCGCTGCGTTGACCCCGATTCCCGAT
GTCCGTCCGGGATTGGATGTTGTTCCCGGTGGGCCTTTCGTCCGTCGGATCGCGCCGGTG
ATGGCTGCAGAGATGGGCAACCCGCAGACTGCCAAACAGGTGCTGATGTCGCTGGCGCTG
GCGTTGGCACAGATCAGTGATCATTACGGGGTTATCTTCATTGATTCCCCTCCGGAGAAC
CAGTTGCTTCTTCAGGCGGCCCTGTGTGCGTCGCGGTTTGTTGTAGTTCCGATGAAGACC
GATGACCTATCAAGGACCGGACTGCGCGAGTTGGCAGGCGATCTAAGGGCGATGCGCGAG
CACAACCCATCTGTGGTGTTGCTCGGCTGTTTCGTGTTTGCGTCAGGAACTTCATCGACG
AGGATCCGGGAAGAGATGAAGAAGAATGTGGCTGCAGATTTGGGGCAGAACGATGACGTG
ATGCTCGATTCGTTCATCCGCCACTCAGAAGCTGTTGGCAGGGACGTGCCTAAGTTTGGT
CGGTTGGCCCACGAACTTGAGCAGGAAATCGTCAATAATCCGTCTCGGTCAGCGATACGG
CAGGGGAGAGCAGATGCGACTACGGTCGTCAGCACGACATCTGTGAGCGTGGCCGAGGAC
TTCGCCAAGCTGACCGGAGAAATTCTCACGCGGGGTTCAAAGATCCGCCAGGACCTGATC
AACGAAGGAGTGTGGCCGTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain (Domain) PF01656 CbiA
SignalP	No significant hit
TMHMM	No significant hit

MUP_00040 MUP_00060