MUP_00160 MUP_00160   MUP_00180 MUP_00180

MUP_00170 : CDS information

close this sectionLocation

Organism
StrainAgy99
Entry nameMycolactone
Contig
Start / Stop / Direction13,929 / 13,477 / - [in whole cluster]
13,929 / 13,477 / - [in contig]
Locationcomplement(13477..13929) [in whole cluster]
complement(13477..13929) [in contig]
TypeCDS
Length453 bp (150 aa)
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close this sectionAnnotation

Category
Product
Product (GenBank)possible conserved transmembrane protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • MUP017c, -, len: 150 aa. Possible conserved transmembrane protein, weakly similar to O06254|Rv3437 possible conserved transmembrane protein from M. tuberculosis (158 aa), fasta scores: opt: 244, E(): 2.3e-05, (38.393% identity in 112 aa overlap). Contains a Prosite match to entry PS50099 PRO_RICH Proline-rich region. Contains hydrophobic region at the C-terminus.

close this sectionSequence

selected fasta
>[possible conserved transmembrane protein]
MSHPYTNAQPHHYPYPNPQHPHPYPYPQRPAYPPPPQVGYYPPHAAAPWTPQPTAPSVLA
ASDHQPLFSVRVTKHTGLVVAFYQQSYTVSGTFAQCETALREAQQHNLVVGWWGVASLVL
WNWIAITNNRSARKALHRAAADRGYNTGGT
selected fasta
>[possible conserved transmembrane protein]
ATGTCACATCCGTACACCAACGCGCAGCCGCACCACTACCCCTACCCGAACCCTCAGCAC
CCACACCCCTACCCCTACCCCCAGCGTCCTGCGTATCCGCCGCCGCCACAGGTTGGCTAC
TACCCTCCGCACGCCGCGGCGCCGTGGACGCCGCAGCCGACCGCTCCATCAGTGCTCGCC
GCGTCGGACCACCAGCCACTCTTCTCTGTCCGAGTGACTAAACACACTGGGCTCGTAGTG
GCTTTCTACCAGCAGAGCTACACTGTCTCGGGCACATTCGCCCAATGCGAAACCGCCCTG
CGCGAAGCCCAACAGCACAATCTCGTCGTCGGGTGGTGGGGAGTCGCATCGCTTGTTCTG
TGGAACTGGATCGCGATTACCAACAACCGCAGCGCCCGAAAAGCGTTGCACCGCGCTGCC
GCTGACCGTGGCTACAACACAGGTGGGACGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro No significant hit
SignalP
[1-8] 0.49 Signal
Bacteria, Gram-negative   
TMHMM
[108-127] Transmembrane (i-o)
Transmembrane 1   
MUP_00160 MUP_00160   MUP_00180 MUP_00180
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