Rapam_00020 : CDS information

Location

Organism	Streptomyces rapamycinicus
Strain	NRRL 5491
Entry name	Rapamycin
Contig	X86780
Start / Stop / Direction	2,319 / 1,150 / - [in whole cluster] 2,319 / 1,150 / - [in contig]
Location	complement(1150..2319) [in whole cluster] complement(1150..2319) [in contig]
Type	CDS
Length	1,170 bp (389 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)
Gene
Gene (GenBank)	orfZ
EC number
Keyword
Note
Note (GenBank)
Reference	ACC Q54287 PmId [7644502] The biosynthetic gene cluster for the polyketide immunosuppressant rapamycin. (Proc Natl Acad Sci U S A. , 1995) [8635730] Organisation of the biosynthetic gene cluster for rapamycin in Streptomyces hygroscopicus: analysis of genes flanking the polyketide synthase. (Gene. , 1996) comment [PMID: 7644502](1995) rapamycin生合成gene clusterの報告。配列解析。 ORF Z: ? --- [PMID: 8635730](1996) PKS flanking genesの配列解析。配列DBに有意な一致なし。

Sequence

>hypothetical protein
MKFLYDDESFSFEALRAAGYAAYGGADLGEVLVTCRQIPEGDEEAWSAQWAATAARIERI
GRDALAAGHRVSAREALLRASNYYRTADFYRRENPAADAESARLAKASQQTFADAAPLLD
TPARALRIPYEDTTLPGYLFLVDDSGTPRPTVLFHGGYDSTLEEDYLALAAGALRRGYNV
IAFDGPGQGSTVREQGLHFPPDWEAVVTPVVDFALTLPEVDAEQLVLMGMSLGGYLAARA
AAFEHRVAACVLYDGVYDFHAVIAATAGRAASTPGGMEALMAQNTMVRWVVRNGRWTFGV
SGVDELVRAAEPYTMAGIADRITCPTLVLEAENDQFFKGQPQRLFDELTCQKELISFRED
EGAGEHCHEGAMFLFHQRTFDWLDTVLAG

>hypothetical protein
ATGAAATTCCTCTACGACGACGAGTCCTTCTCCTTCGAGGCACTGCGCGCCGCGGGCTAC
GCGGCCTATGGCGGCGCCGACCTCGGCGAGGTCCTGGTCACCTGCCGGCAGATCCCAGAG
GGAGACGAGGAAGCCTGGTCGGCCCAGTGGGCCGCGACGGCGGCGCGCATCGAGCGCATC
GGCCGGGACGCGCTGGCCGCCGGTCACCGGGTCAGCGCCCGGGAGGCGCTGCTGCGCGCG
TCCAACTACTACCGGACCGCCGACTTCTACCGCCGCGAGAATCCCGCAGCCGACGCCGAG
TCGGCGCGGCTCGCCAAGGCCTCCCAGCAGACGTTCGCCGACGCGGCCCCGCTGCTCGAC
ACTCCGGCCCGCGCCCTGCGCATCCCGTACGAGGACACCACGCTTCCCGGCTACCTGTTC
CTCGTCGACGATTCGGGCACCCCGCGCCCGACCGTGCTCTTCCACGGCGGGTACGACTCC
ACCCTCGAGGAGGACTACCTGGCGCTGGCCGCCGGCGCGCTGCGGCGCGGCTACAACGTC
ATCGCGTTCGACGGCCCCGGCCAGGGCAGCACCGTCCGCGAGCAGGGCCTGCACTTCCCG
CCGGACTGGGAGGCGGTGGTCACCCCGGTCGTCGACTTCGCGCTCACCCTGCCCGAGGTG
GACGCCGAGCAGCTCGTGCTGATGGGCATGAGCCTGGGCGGCTACCTCGCCGCGAGGGCG
GCGGCCTTCGAGCACCGCGTAGCCGCGTGCGTGCTGTACGACGGCGTCTACGACTTCCAC
GCGGTCATCGCCGCGACCGCCGGCCGTGCCGCTTCGACGCCGGGCGGCATGGAGGCGTTG
ATGGCGCAGAACACCATGGTGCGGTGGGTGGTGCGCAACGGCCGGTGGACCTTCGGTGTA
TCCGGTGTCGACGAGCTGGTCAGGGCGGCCGAGCCGTACACCATGGCGGGTATCGCCGAC
CGCATCACCTGTCCGACACTCGTGCTCGAAGCCGAGAACGACCAGTTCTTCAAGGGGCAG
CCGCAGCGGCTGTTCGACGAGCTGACCTGCCAGAAGGAGCTGATCTCCTTCCGCGAGGAC
GAAGGCGCGGGCGAGCACTGCCACGAGGGTGCGATGTTCCTGTTCCACCAGCGCACCTTC
GACTGGCTCGACACCGTGCTCGCCGGCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	No significant hit
SignalP	No significant hit
TMHMM	No significant hit

Rapam_00010 Rapam_00030