Rapam_00070
Rapam_00080 : CDS information
Location
| Organism | Streptomyces rapamycinicus |
|---|---|
| Strain | NRRL 5491 |
| Entry name | Rapamycin |
| Contig | X86780 |
| Start / Stop / Direction | 7,356 / 8,555 / + [in whole cluster] 7,356 / 8,555 / + [in contig] |
| Location | 7356..8555 [in whole cluster] 7356..8555 [in contig] |
| Type | CDS |
| Length | 1,200 bp (399 aa) |
Annotation
| Category | 5.1 general function |
|---|---|
| Product | putative two-component system histidine kinase |
| Product (GenBank) | sensory protein kinase |
| Gene | orfS rapS |
| Gene (GenBank) | orfS |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) | |
| Reference |
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| Related Reference |
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Sequence
>putative two-component system histidine kinase [sensory protein kinase] MRLNPWALLSRLPFRARLTAAFSALFLIAGIALLAFVVLLARHGTEQQAQGISVTYGDVP SGSGAPMGPVRPTRPNLTQRAPGDVAMFQKIDQTVRAVQDTALRQMVLWSAVGLLAMALL AGVLGWWLAGRALRPVASMTETARRISEQSLHQRLALTGPDDELHRLADTFDTMLDRLEK SFESQRRFVANASHELKTPLTVQRTSLQVGLADPLPEGLADVREDLLTANHEAEQLINGL LLLARSDRGLEKTQTMDVAAIVRLVSTGLTPLATKNGVRIDLDADTPLAVPGDPVLLRHL LTNLVRNAIQYNHPGGHVRIRLDTPTVTVTNTGPHVSPEQIPDLFEPFHRLDGDRTATTG HGLGLSIAHSIANAHHATLTAQPGTEGGLTLTLRFPCRR
>putative two-component system histidine kinase [sensory protein kinase] GTGCGACTGAACCCATGGGCGCTGCTGAGCCGACTGCCCTTCCGCGCCCGCCTGACCGCG GCCTTCTCCGCCCTCTTTCTGATCGCCGGCATCGCACTGCTCGCCTTCGTGGTGCTACTC GCCCGCCACGGAACGGAGCAGCAGGCCCAGGGGATATCGGTCACGTACGGGGATGTGCCG AGCGGCAGTGGGGCGCCCATGGGGCCCGTGCGCCCCACCCGGCCGAATCTCACACAGCGG GCCCCGGGCGACGTCGCCATGTTCCAGAAGATCGACCAGACCGTGCGAGCCGTCCAGGAC ACCGCGCTGCGCCAGATGGTGCTCTGGTCCGCCGTCGGCCTCCTCGCCATGGCGCTCCTT GCCGGAGTGCTCGGCTGGTGGCTCGCCGGCCGAGCCCTGCGACCCGTCGCCTCCATGACC GAAACCGCGCGCCGCATCAGCGAACAGAGCCTCCACCAGCGTCTCGCGCTCACCGGCCCC GACGACGAACTCCACCGCCTCGCCGACACCTTCGACACCATGCTCGACAGGCTCGAGAAG TCCTTCGAGAGCCAGCGCCGCTTCGTCGCCAACGCCTCCCACGAACTCAAGACCCCTCTC ACGGTCCAGCGCACCAGCCTCCAGGTCGGGCTCGCCGACCCCCTCCCCGAGGGACTCGCA GACGTCCGCGAGGACCTGCTCACCGCCAACCACGAGGCCGAACAGCTGATCAACGGCCTG CTGCTGCTGGCGCGCAGCGACCGCGGCCTGGAGAAGACCCAGACCATGGACGTCGCGGCC ATCGTCCGGCTCGTGTCCACCGGCCTCACCCCACTGGCAACGAAGAACGGCGTGCGCATC GACCTCGACGCCGATACCCCGCTGGCCGTTCCCGGTGACCCGGTCCTGCTGCGCCACCTG CTCACGAACCTGGTCCGCAATGCCATCCAGTACAACCACCCCGGTGGCCACGTCCGCATA CGGCTCGATACCCCCACCGTGACGGTGACCAATACGGGCCCCCACGTGTCCCCGGAACAG ATCCCCGACCTGTTCGAGCCCTTCCACCGCCTGGACGGGGACCGTACCGCCACCACCGGC CACGGTCTGGGACTGTCCATCGCCCACTCGATCGCCAACGCCCACCACGCCACGCTGACG GCACAACCCGGCACCGAAGGCGGACTCACCCTCACCCTGCGCTTCCCTTGCCGCCGTTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR003594 ATPase-like, ATP-binding domain (Domain)
IPR003660 HAMP linker domain (Domain)
IPR003661 Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (Domain)
IPR004358 Signal transduction histidine kinase-related protein, C-terminal (Domain)
IPR005467 Signal transduction histidine kinase, core (Domain)
IPR009082 Signal transduction histidine kinase, homodimeric (Domain)
|
| SignalP |  ![[1-41] 0.999 Signal](../../img/R.gif "[1-41] 0.999 Signal"){kind=small} |
| TMHMM | ![[18-40] Transmembrane (o-i)](../../img/G.gif "[18-40] Transmembrane (o-i)"){kind=small} ![[107-129] Transmembrane (i-o)](../../img/C.gif "[107-129] Transmembrane (i-o)"){kind=small} |
![[292-396] 3.90000000000001e-22 PF02518](../../img/H.gif "[292-396] 3.90000000000001e-22 PF02518"){kind=small}
![[253-398] 5.59999999999999e-31 G3DSA:3.30.565.10](../../img/X2.gif "[253-398] 5.59999999999999e-31 G3DSA:3.30.565.10"){kind=small}
![[251-399] 4.10001399699315e-35 SSF55874](../../img/B.gif "[251-399] 4.10001399699315e-35 SSF55874"){kind=small}
![[130-183] PS50885](../../img/M.gif "[130-183] PS50885"){kind=small}
![[325-339] 2.10000037262656e-05 PR00344](../../img/F.gif "[325-339] 2.10000037262656e-05 PR00344"){kind=small}
