Fren_00050
Fren_00060 : CDS information
Location
| Organism | Streptomyces roseofulvus |
|---|---|
| Strain | AK24158 |
| Entry name | Frenolicin |
| Contig | AF058302 |
| Start / Stop / Direction | 8,271 / 9,824 / + [in whole cluster] 8,271 / 9,824 / + [in contig] |
| Location | 8271..9824 [in whole cluster] 8271..9824 [in contig] |
| Type | CDS |
| Length | 1,554 bp (517 aa) |
Annotation
| Category | 4.3 transport |
|---|---|
| Product | putative drug resistance transporter |
| Product (GenBank) | putative antibiotic antiporter |
| Gene | |
| Gene (GenBank) | frnF |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) |
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| Reference |
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| Related Reference |
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Sequence
>putative drug resistance transporter [putative antibiotic antiporter] MSSSPPAPATPGVAPHSPPAPRLGLVLLVCCLAQFLVTLSVAIVNVALPDIQRGLGFSAE SLQWVVNAYTVTFAGFLLLGGRIADLFGRRRIFLAGVALFALASLAGGLSQNAGTLVAAR AVQGLAAAVIAPTTLAVLGTSFKDPHQRHRAFGAWGAVSGAGGAFGALAGGALTDAFSWR WVLFVNLPIGVLLLAGIAWGISELRHAGEDRRIDVAGALTVTLGLLALVLGIVQSGPHGW GSAATLVPLLGGLALLGAFVLVEGRFAPQPLIPLGIFRSRSVVAANVVAMTSGAALFSMF YFLTLFLNQVRDYSPLRTGFAYLPLALAIMVAAQFSAALVRVLGPRTTLLVSMALTAAGL LWLSRLTEDSGFAGGLLGPTLVVGIGQGISMSASAIAGVAGVRPQQAGLASGLLNATRQL GGALGLAVVAAVATSRADGLLDGVARPTAELARHAQASGHPLSIAVAAALSAVGLLASLA APGRSPAPTGTRTGGDSAAPAPAAAPAATGTTGPGEI
>putative drug resistance transporter [putative antibiotic antiporter] ATGTCCTCCTCCCCGCCCGCCCCCGCCACCCCGGGCGTTGCCCCGCACTCGCCGCCCGCT CCGCGCCTCGGCCTCGTGCTCCTCGTGTGCTGCCTGGCGCAGTTCCTCGTGACGCTCAGC GTCGCCATCGTCAACGTGGCGCTCCCCGACATCCAGCGCGGGCTCGGCTTCAGCGCCGAG AGCCTCCAGTGGGTCGTCAACGCCTACACCGTCACCTTCGCGGGCTTCCTGCTCCTCGGC GGACGGATCGCCGACCTCTTCGGGCGGCGCCGCATCTTCCTCGCGGGTGTCGCGCTCTTC GCCCTCGCGAGCCTCGCCGGGGGCCTAAGCCAGAACGCGGGGACCCTCGTCGCCGCGCGC GCCGTGCAGGGCCTCGCCGCCGCCGTCATCGCGCCCACCACCCTCGCCGTGCTCGGCACG AGCTTCAAGGACCCGCACCAGCGCCACCGCGCCTTCGGCGCCTGGGGCGCGGTCTCCGGT GCGGGCGGCGCCTTCGGCGCCCTCGCGGGCGGCGCGCTCACGGACGCGTTCTCCTGGCGC TGGGTGCTCTTCGTCAACCTCCCGATCGGCGTGCTCCTGCTCGCCGGGATCGCCTGGGGC ATCAGCGAGTTGCGGCACGCGGGCGAGGACCGCCGCATCGACGTCGCGGGCGCCCTCACC GTGACGCTCGGTCTCCTCGCGCTCGTCCTCGGCATCGTGCAGAGCGGCCCGCACGGCTGG GGCTCCGCCGCCACCCTCGTCCCGCTCCTCGGCGGCCTCGCCCTGCTCGGTGCCTTCGTT CTCGTCGAGGGGCGGTTCGCGCCGCAGCCGCTCATACCGCTCGGCATCTTCCGCTCCCGC TCCGTCGTCGCGGCCAACGTCGTGGCGATGACCAGCGGCGCCGCGCTCTTCAGCATGTTC TACTTCCTCACCCTCTTCCTCAACCAGGTACGGGACTACAGCCCGCTGCGCACCGGCTTC GCCTATCTGCCGCTCGCGCTCGCCATCATGGTCGCCGCGCAGTTCTCCGCCGCGCTCGTG CGCGTCCTCGGCCCCCGTACGACCCTGCTCGTGTCCATGGCTCTCACCGCCGCCGGACTG CTCTGGCTCTCGCGGCTCACCGAGGACTCCGGGTTCGCGGGCGGACTCCTCGGCCCGACC CTGGTCGTCGGCATCGGACAGGGCATCTCGATGTCCGCCTCCGCGATCGCGGGGGTCGCC GGGGTGCGCCCGCAGCAGGCCGGGCTCGCCTCCGGGCTGCTCAACGCGACCCGGCAGCTC GGCGGCGCCCTCGGCCTCGCGGTCGTCGCCGCCGTCGCCACCTCGCGCGCCGACGGACTC CTCGACGGGGTCGCGCGGCCCACGGCGGAACTCGCCCGGCACGCCCAGGCGTCCGGGCAC CCGCTCTCCATCGCCGTGGCCGCGGCGCTGTCCGCCGTCGGCCTGCTCGCCTCGCTCGCC GCCCCGGGCCGCTCTCCGGCCCCCACCGGCACCCGCACGGGCGGCGACTCCGCCGCACCG GCTCCCGCGGCGGCCCCCGCCGCCACCGGGACCACCGGCCCCGGCGAGATCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR001411 Tetracycline resistance protein TetB/drug resistance transporter (Family)
IPR005829 Sugar transporter, conserved site (Conserved_site)
IPR011701 Major facilitator superfamily (Family)
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
IPR020846 Major facilitator superfamily domain (Domain)
|
| SignalP |  ![[1-41] 0.478 Signal](../../img/R.gif "[1-41] 0.478 Signal"){kind=small} |
| TMHMM | ![[25-47] Transmembrane (i-o)](../../img/C.gif "[25-47] Transmembrane (i-o)"){kind=small} ![[62-84] Transmembrane (o-i)](../../img/G.gif "[62-84] Transmembrane (o-i)"){kind=small} |
![[29-53] 7.89999609889417e-08 PR01036](../../img/F.gif "[29-53] 7.89999609889417e-08 PR01036"){kind=small}
![[80-96] PS00216](../../img/P.gif "[80-96] PS00216"){kind=small}
![[31-425] 9e-51 PF07690](../../img/H.gif "[31-425] 9e-51 PF07690"){kind=small}
![[1-481] 1.79999754022378e-71 SSF103473](../../img/B.gif "[1-481] 1.79999754022378e-71 SSF103473"){kind=small}
![[26-486] PS50850](../../img/M.gif "[26-486] PS50850"){kind=small}
