Herb_00290 last 
Herb_00300 : CDS information
Location
| Organism | Streptomyces hygroscopicus |
|---|---|
| Strain | AM 3672 |
| Entry name | Herbimycin A |
| Contig | AY947889 |
| Start / Stop / Direction | 85,764 / 82,921 / - [in whole cluster] 85,764 / 82,921 / - [in contig] |
| Location | complement(82921..85764) [in whole cluster] complement(82921..85764) [in contig] |
| Type | CDS |
| Length | 2,844 bp (947 aa) |
Annotation
| Category | 4.1 transcriptional regulator |
|---|---|
| Product | putative LuxR family transcriptional regulator |
| Product (GenBank) | HbmRI |
| Gene | |
| Gene (GenBank) | hbmRI |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) |
|
| Reference |
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| Related Reference |
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Sequence
>putative LuxR family transcriptional regulator [HbmRI] MSMGLTDYQSELRGVLDMAARGNGGLLKVTGGPGVGKTSLLGSLKEQAAESGAVCLMASG FADDTAIPFNIVEQLIWSSAFTDELDVVARWRTAGERYSEAEPGILRSLVREISDVLHRI AGGKQLIIAVDDAEHADYPSLMCLLHIARHASGTRTLVVMTCGQSHQLCVGTHGFHELYK IKIDTLPESGVGHLLERHGDADLADRIRASCHAVSGGNPRLVKALLRDHLQAAPGGSETD VTVGAEFQETYRGCLLSHPALLQVAQALAVLDRYGGPGRVASLLACGRERATRAITVMNS AGLLEDGRFRHPAARYITLETLSAEDRARLSAKAAELLYADGADPIAVAELLVTADRTPD QKDVTVLWHAAQKNLDHGRTEEAIAGLRLAARADLGRREHMDILMALVGALWSSNPATAE PELDRLMAAIREEFPADIPEQYLCFLLFMVLWFGRFSDGEEAFKWLSGGGDTDNASSMAA LRVTRQWATFLKPALIHDFPDQASSAGEVDGLWAANLEHGLQLSVDELGMEIGHFQDPRQ VADFSPDTMHLLSPSNHFWFAYAYACRMVWALAARGEAETADRLCGALFTAAGNLNMKTP GAVALAMRAYIRCRHGDFTSAIDLAGTALKSIPPRGWGVAIGLPLSVLVAAHTAIGRLDE AQRYLHYWVPKEMFDSVVGLEYLRARGQYCLATNRPYAALNDFMVSGMLMDQWPVDFGDL APWRIDAAEAYLRVQEPAEAKRLALEELKLSPDRPLSTRGRALRVLAMAEDPDKRRLLLY QSAKCLREHGDRFELARTLAELSQDFLSTGETQQARGTWHEAQKLMDECGISAQHESRRD LVVDGAESPADARLPEPAGDTGEPEESDPAASAEGAEQPVLSEAEWRVATLAASGMSNRQ IAKSLYITVSTVEQHLTRIYRKLSVGNRQELSRRLWQLIGATGSSSC
>putative LuxR family transcriptional regulator [HbmRI] ATGAGTATGGGACTGACAGATTATCAATCAGAGCTTCGCGGCGTCCTCGACATGGCAGCA CGAGGAAACGGCGGGCTTCTCAAAGTGACCGGGGGACCCGGTGTCGGAAAGACCTCCTTA TTGGGCAGTCTGAAGGAGCAGGCGGCCGAATCGGGTGCGGTCTGTCTTATGGCGTCCGGA TTCGCGGACGACACCGCGATCCCGTTCAATATAGTGGAACAGCTCATCTGGTCGTCCGCG TTCACGGATGAATTGGACGTCGTGGCGCGCTGGAGGACCGCCGGAGAGCGGTATTCGGAA GCCGAACCCGGCATACTGAGAAGCCTGGTCCGAGAGATATCCGATGTGCTGCACCGCATC GCGGGCGGCAAGCAACTGATCATCGCGGTTGACGATGCCGAGCATGCCGACTACCCCTCC CTCATGTGCCTGCTGCATATCGCCAGGCATGCCTCCGGCACCCGTACGCTCGTCGTGATG ACCTGCGGGCAGAGTCATCAGTTGTGTGTCGGCACTCACGGCTTCCATGAGCTCTACAAG ATCAAGATCGATACACTCCCGGAATCCGGGGTCGGACACCTGCTGGAGCGGCACGGCGAC GCCGACCTGGCCGACCGGATCCGCGCCTCCTGCCACGCCGTCAGCGGTGGCAACCCACGG CTGGTCAAGGCCCTGCTGCGGGACCATCTCCAGGCCGCTCCGGGCGGGTCGGAGACGGAT GTCACCGTCGGCGCGGAGTTCCAGGAGACCTATCGCGGGTGCCTGTTGTCCCATCCGGCG TTGCTCCAGGTGGCACAGGCCCTCGCGGTGCTGGACCGGTACGGCGGCCCGGGGCGGGTG GCCAGTCTGCTCGCCTGCGGCCGGGAACGCGCGACCCGGGCCATCACCGTCATGAACTCC GCCGGACTGCTGGAGGACGGACGGTTCCGGCACCCCGCGGCGCGATACATCACGCTGGAG ACGCTGTCGGCGGAGGACCGGGCCCGGCTCAGCGCGAAAGCGGCCGAACTTCTGTATGCC GACGGGGCCGATCCGATCGCGGTGGCGGAACTCCTGGTCACCGCCGACAGAACGCCCGAC CAAAAAGACGTCACCGTGCTCTGGCACGCGGCCCAGAAGAATCTCGACCACGGCCGTACG GAGGAAGCGATCGCGGGCCTGCGGCTCGCCGCCCGCGCGGACCTCGGCCGGCGCGAGCAC ATGGACATTCTCATGGCGCTGGTCGGCGCGTTATGGTCCAGCAATCCGGCGACCGCCGAA CCCGAACTGGACCGCCTGATGGCCGCGATACGGGAGGAATTCCCCGCGGACATCCCGGAA CAGTATCTGTGCTTCCTGCTCTTCATGGTGCTCTGGTTCGGCCGGTTCAGCGATGGGGAA GAAGCCTTCAAGTGGCTTTCGGGCGGTGGTGACACCGATAACGCCTCCAGCATGGCCGCT CTGCGGGTGACCCGGCAGTGGGCCACCTTCCTCAAACCGGCCCTGATCCATGACTTCCCC GACCAGGCTTCCTCGGCCGGGGAAGTCGACGGACTGTGGGCGGCCAACCTGGAGCACGGT CTTCAGCTCTCCGTCGACGAACTGGGCATGGAGATCGGGCATTTCCAGGATCCCCGGCAG GTGGCGGACTTCTCTCCCGACACCATGCATCTGTTGTCGCCCTCCAACCACTTCTGGTTC GCCTACGCATACGCCTGCCGGATGGTCTGGGCATTGGCCGCGAGAGGCGAAGCGGAAACG GCGGACCGGCTGTGCGGCGCGCTTTTCACCGCGGCCGGCAACTTGAACATGAAGACGCCC GGCGCCGTCGCCCTGGCCATGCGCGCCTACATCAGATGCCGCCATGGGGACTTCACCTCG GCCATCGATCTCGCCGGCACCGCGCTGAAGTCCATCCCCCCGCGCGGCTGGGGCGTCGCC ATCGGATTGCCGCTCTCCGTTCTGGTGGCGGCCCACACCGCCATCGGCAGACTCGATGAG GCCCAGCGATATCTGCATTACTGGGTGCCGAAGGAAATGTTCGACAGCGTTGTCGGGTTG GAGTACCTCCGGGCCCGTGGACAGTACTGCCTGGCCACCAACCGCCCCTACGCAGCGCTG AACGACTTCATGGTGAGCGGGATGCTGATGGACCAGTGGCCCGTGGACTTCGGCGACCTG GCGCCCTGGCGTATCGACGCCGCCGAGGCGTATCTGCGTGTCCAGGAGCCGGCGGAGGCC AAAAGACTCGCCCTGGAGGAACTCAAGCTGTCGCCCGACCGCCCCTTGAGCACCCGCGGC CGGGCGCTGCGCGTTCTGGCCATGGCCGAAGACCCGGACAAGCGCAGGCTGCTCCTGTAT CAGTCCGCCAAGTGTCTGCGCGAGCACGGCGACCGTTTCGAACTCGCCCGTACGCTCGCC GAGCTCAGCCAGGACTTCCTCAGCACCGGGGAAACCCAGCAGGCCCGCGGCACCTGGCAT GAGGCGCAGAAGCTGATGGACGAGTGCGGGATCAGCGCCCAGCACGAGAGCCGCAGGGAC CTCGTCGTGGATGGCGCCGAGAGCCCCGCGGACGCGCGACTGCCGGAACCCGCCGGGGAT ACCGGGGAGCCCGAGGAGTCGGACCCCGCCGCCTCGGCCGAAGGCGCGGAGCAGCCCGTT CTCTCGGAGGCCGAGTGGCGCGTGGCGACCCTGGCCGCGTCGGGGATGTCCAACCGGCAG ATCGCCAAGAGCCTCTACATCACGGTCAGCACCGTGGAGCAGCATCTGACCCGCATCTAC CGAAAGCTCTCGGTCGGAAATCGGCAGGAGCTGTCGCGTCGGCTGTGGCAGCTCATCGGA GCCACCGGATCGTCCTCCTGCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR000792 Transcription regulator LuxR, C-terminal (Domain)
IPR011990 Tetratricopeptide-like helical (Domain)
IPR011991 Winged helix-turn-helix transcription repressor DNA-binding (Domain)
IPR016032 Signal transduction response regulator, C-terminal effector (Domain)
|
| SignalP | No significant hit |
| TMHMM | No significant hit |
![[895-922] PS00622](../../img/P.gif "[895-922] PS00622"){kind=small}
![[878-935] 2.30000440726534e-21 SM00421](../../img/R.gif "[878-935] 2.30000440726534e-21 SM00421"){kind=small}
![[881-895] 1.49999977583352e-08 PR00038](../../img/F.gif "[881-895] 1.49999977583352e-08 PR00038"){kind=small}
![[874-939] PS50043](../../img/M.gif "[874-939] PS50043"){kind=small}
![[879-932] 8.60000000000001e-14 PF00196](../../img/H.gif "[879-932] 8.60000000000001e-14 PF00196"){kind=small}
![[572-840] 1.7e-14 G3DSA:1.25.40.10](../../img/X2.gif "[572-840] 1.7e-14 G3DSA:1.25.40.10"){kind=small}
![[859-938] 1.89999859865864e-16 SSF46894](../../img/B.gif "[859-938] 1.89999859865864e-16 SSF46894"){kind=small}
Herb_00290 last 
