Heda_00260
Heda_00270 : CDS information
Location
| Organism | Streptomyces griseoruber |
|---|---|
| Strain | ATCC 15422 |
| Entry name | Hedamycin |
| Contig | AY196994 |
| Start / Stop / Direction | 38,734 / 37,469 / - [in whole cluster] 38,734 / 37,469 / - [in contig] |
| Location | complement(37469..38734) [in whole cluster] complement(37469..38734) [in contig] |
| Type | CDS |
| Length | 1,266 bp (421 aa) |
Annotation
| Category | 1.1 PKS |
|---|---|
| Product | polyketide synthase chain length factor subunit |
| Product (GenBank) | keto synthase beta |
| Gene | hedD |
| Gene (GenBank) | |
| EC number | |
| Keyword |
|
| Note | |
| Note (GenBank) |
|
| Reference |
|
PKS/NRPS Module
Sequence
>polyketide synthase chain length factor subunit [keto synthase beta]
MSDALITGIGVAAPNGVGLENYWAATLKGASAVRPATRFDTAGHPVVLAAEVPESEAEAA
FPRRLHPQTDRLTRLALLSSDEALADAGIDPAALDGYAMGTAVTGVTGGLEFGQRQLQLQ
WGTGWESVSPYMSFAWYYAVHTGQVSIRHGMRGPGGVVVSEQAGGLDSLAFARRRVRTGT
AVMTAGGFDSMLCPYGMSVLSVADGVSRDGDPARAGLPFCAASTGFVPGEGGAVLVVEPG
AGAAERGAPHRYGLIAGHGAAFDPDPAGSDGSSRSGLLRAARAALRDAGMTPDDIGVVFA
DGVGSGPLDRAEAAVLTGLFGSRRVPVSAPKALVGRMLSGGSALDVVAALLTLRDGLIPA
VPGVRREDVDPRVELVVGEPRAERVDSALVLARGHGGFASALVLTRAGGGPSFRRPRRPG
G
>polyketide synthase chain length factor subunit [keto synthase beta]
ATGAGCGACGCGCTGATCACGGGCATCGGAGTGGCCGCCCCCAACGGGGTGGGCCTGGAG
AACTACTGGGCGGCCACGCTCAAGGGAGCGTCCGCCGTCCGGCCGGCGACGCGCTTCGAC
ACGGCGGGGCACCCGGTCGTGCTCGCGGCCGAGGTCCCCGAGTCGGAGGCGGAGGCCGCC
TTCCCCCGGCGGCTGCACCCGCAGACCGACCGGCTGACCCGGCTGGCGCTGCTGTCGTCC
GACGAGGCGCTGGCCGATGCCGGGATCGACCCGGCCGCGCTGGACGGCTACGCGATGGGC
ACGGCCGTCACGGGCGTCACCGGCGGGCTGGAGTTCGGCCAGCGGCAGCTCCAGTTGCAG
TGGGGCACGGGCTGGGAGTCGGTGAGCCCGTACATGTCGTTCGCCTGGTACTACGCGGTG
CACACCGGACAGGTGTCGATCCGGCACGGGATGCGCGGTCCGGGCGGGGTCGTGGTGTCC
GAACAGGCCGGCGGCCTGGACTCGCTGGCGTTCGCGCGCCGCCGGGTGCGGACCGGGACG
GCGGTGATGACGGCGGGCGGCTTCGACAGCATGCTGTGCCCCTACGGCATGTCGGTGCTG
TCGGTGGCCGACGGAGTGAGCCGGGACGGCGATCCGGCCCGGGCCGGGCTGCCGTTCTGC
GCGGCCTCCACCGGCTTCGTGCCGGGAGAGGGCGGCGCCGTCCTGGTGGTGGAGCCCGGT
GCCGGGGCCGCGGAACGCGGGGCGCCGCACCGCTACGGGCTGATCGCCGGCCACGGCGCC
GCGTTCGACCCGGACCCGGCGGGGTCGGACGGCTCGTCGCGCAGCGGCCTGCTCAGGGCG
GCGCGCGCGGCGCTGCGGGACGCCGGGATGACACCGGACGACATCGGCGTGGTGTTCGCG
GACGGCGTGGGCAGCGGGCCGCTGGACCGGGCCGAGGCGGCTGTCCTGACCGGGCTCTTC
GGCTCCCGGCGGGTGCCGGTGAGCGCGCCGAAGGCGTTGGTGGGGCGGATGCTCTCCGGG
GGTTCCGCGCTGGACGTGGTGGCCGCCCTGCTGACCCTGCGCGACGGCCTGATCCCGGCC
GTGCCCGGCGTCCGGCGGGAGGACGTCGATCCGCGGGTGGAGCTGGTGGTCGGTGAGCCG
CGCGCCGAGCGGGTCGACTCCGCACTGGTGCTGGCGCGGGGGCACGGGGGCTTCGCCTCG
GCGCTGGTGCTCACTCGGGCGGGGGGCGGTCCGTCGTTCAGGCGGCCTCGGCGACCTGGC
GGTTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR014030 Beta-ketoacyl synthase, N-terminal (Domain)
IPR014031 Beta-ketoacyl synthase, C-terminal (Domain)
IPR016038 Thiolase-like, subgroup (Domain)
IPR016039 Thiolase-like (Domain)
IPR020841 Polyketide synthase, beta-ketoacyl synthase domain (Domain)
|
| SignalP |  ![[1-32] 0.14 Signal](../../img/R.gif "[1-32] 0.14 Signal"){kind=small} |
| TMHMM | No significant hit |
![[4-238] 4e-45 PF00109](../../img/H.gif "[4-238] 4e-45 PF00109"){kind=small}
![[4-250] 3.9e-41 G3DSA:3.40.47.10](../../img/X2.gif "[4-250] 3.9e-41 G3DSA:3.40.47.10"){kind=small}
![[1-248] 1.6e-52 SSF53901](../../img/B.gif "[1-248] 1.6e-52 SSF53901"){kind=small}
