Kirro_00130 : CDS information

close this sectionLocation

Organism
StrainTü365
Entry nameKirromycin
Contig
Start / Stop / Direction14,631 / 16,265 / + [in whole cluster]
14,631 / 16,265 / + [in contig]
Location14631..16265 [in whole cluster]
14631..16265 [in contig]
TypeCDS
Length1,635 bp (544 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category
Product
Product (GenBank)putative major facilitator superfamily transporter
Gene
Gene (GenBank)
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in kirromycin biosynthesis.
Note (GenBank)

close this sectionSequence

selected fasta
>[putative major facilitator superfamily transporter]
MTPGAGTTKSSAAGARVVLLTLAAGQFLMALDSSVMNVSIAAVAVDVGTTVTGIQGAITA
YTLVMAMFMIPGGKVGALLGRRRGFMIGCCIYGCGSLTTALAPNLGVLLVGWSFLEGIGA
VLILPAVVALVAGNFAVERRAAAYGLVAAAGAVAIALGPLIGGFATTYLSWRWVFAGEVL
VVVGILFLARRLTDVPSGERPHIDFVGTGLSALGLGTFVFGVLRSDEWGWFRPKADAPSW
LGVSLVVWLMLTGVLLIWFFTAWEGRLVAQRREPLLDPALLHNKQLTGGLTMFFFQYLVM
MGVFFVVPLYLSVALGLSALATGGRLLPLSLTLVAAATLIPRLLPDISPRRVVRLGIVAI
LAGAVLLMAALDTGAGAEIVTVPLLLIGLGLGALASQLGSVTVSAVPDEQSADVGGVQNA
VTNLGSSIGTALAGSILLAVLTSSFLTHIADNPAVPARVKNEAAIKLQSGATFLSDAQLK
TALDEAGTSQKVAQAALEANADARLDGLRAALAILAFTSVLAMYFTARLPTAQPRSGGDL
QSVG
selected fasta
>[putative major facilitator superfamily transporter]
ATGACTCCCGGAGCCGGCACGACCAAGAGCTCGGCAGCAGGAGCGCGGGTCGTTCTGCTG
ACACTTGCTGCCGGCCAGTTCCTGATGGCGCTCGACAGTTCCGTCATGAACGTTTCAATC
GCTGCGGTCGCCGTAGACGTCGGCACGACCGTGACCGGGATTCAAGGCGCCATCACGGCG
TACACACTCGTGATGGCGATGTTCATGATTCCCGGCGGCAAGGTCGGAGCGTTGCTCGGC
CGAAGGCGGGGTTTCATGATCGGCTGCTGTATCTACGGATGCGGCTCCCTCACCACCGCT
CTCGCGCCGAATCTGGGCGTGCTGCTGGTCGGCTGGTCGTTCCTCGAAGGAATCGGGGCT
GTGCTCATCCTGCCCGCGGTCGTAGCGCTGGTAGCCGGCAACTTCGCCGTGGAACGACGG
GCGGCCGCCTATGGACTGGTCGCGGCCGCGGGTGCCGTGGCGATCGCGCTCGGGCCGCTC
ATCGGAGGCTTCGCAACCACCTACCTTTCCTGGCGATGGGTGTTCGCCGGTGAGGTCCTG
GTCGTGGTCGGCATCCTGTTCCTCGCTCGCCGTCTCACCGACGTGCCGAGCGGCGAGCGT
CCGCACATCGACTTCGTCGGCACCGGGCTGTCCGCGCTCGGGCTCGGCACCTTTGTCTTC
GGTGTGCTCCGCTCCGACGAATGGGGCTGGTTCAGGCCGAAGGCCGACGCCCCGTCGTGG
CTGGGAGTCTCGCTCGTCGTGTGGCTGATGCTGACGGGCGTGCTCTTGATCTGGTTCTTC
ACCGCGTGGGAGGGCCGCCTCGTGGCACAGCGCCGGGAACCGCTCCTCGACCCGGCCCTG
CTGCACAACAAGCAGCTCACCGGCGGTTTGACCATGTTCTTCTTCCAGTACCTCGTCATG
ATGGGCGTGTTCTTCGTCGTACCGCTGTACCTGTCGGTCGCTCTGGGCCTGTCCGCGCTC
GCGACCGGCGGACGACTTCTACCGCTGTCGCTGACGTTGGTGGCAGCCGCAACCCTCATC
CCACGTCTCCTCCCCGACATCTCACCGAGGCGGGTGGTCCGGCTCGGGATCGTCGCGATC
CTCGCCGGCGCGGTGCTCCTCATGGCCGCCCTCGACACGGGCGCGGGAGCGGAGATCGTC
ACAGTTCCTCTCCTGCTCATCGGGCTCGGCTTGGGTGCGCTGGCGTCCCAGCTCGGCTCC
GTCACCGTCTCCGCGGTGCCGGACGAACAGAGCGCAGACGTCGGTGGTGTGCAGAACGCC
GTCACCAACCTCGGCTCCTCCATCGGCACGGCTCTGGCGGGGTCGATCCTGCTCGCCGTA
CTCACCTCCTCGTTCCTGACCCACATCGCGGACAATCCGGCCGTCCCGGCCAGGGTGAAG
AACGAAGCGGCGATCAAACTCCAGAGTGGGGCGACCTTTCTGTCGGACGCCCAGCTCAAG
ACCGCTCTCGATGAAGCGGGCACGAGCCAGAAGGTGGCCCAGGCAGCGCTGGAGGCCAAC
GCCGACGCCAGGTTGGACGGCCTGCGCGCCGCGCTCGCCATCCTGGCCTTCACCTCCGTC
CTGGCGATGTACTTCACCGCGAGGCTCCCAACCGCCCAGCCCCGCTCCGGTGGAGACCTG
CAGTCGGTCGGGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR001411 Tetracycline resistance protein TetB/drug resistance transporter (Family)
 [21-45]  6.29999562859499e-10 PR01036 [113-133]  6.29999562859499e-10 PR01036 [143-167]  6.29999562859499e-10 PR01036 [168-192]  6.29999562859499e-10 PR01036
PR01036   TCRTETB
IPR011701 Major facilitator superfamily (Family)
 [23-429]  1.29999999999998e-37 PF07690
PF07690   MFS_1
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
 [1-529]  3.49999466863949e-54 SSF103473
SSF103473   MFS_gen_substrate_transporter
IPR020846 Major facilitator superfamily domain (Domain)
 [18-534]  PS50850
PS50850   MFS
SignalP
 [1-41]  0.624 Signal
Bacteria, Gram-positive   
 [1-30]  0.979 Signal
Eukaryota   
 [1-30]  0.628 Signal
Bacteria, Gram-negative   
TMHMM
 [12-31]  Transmembrane (i-o) [51-73]  Transmembrane (o-i) [86-108]  Transmembrane (i-o) [118-137]  Transmembrane (o-i) [144-166]  Transmembrane (i-o) [171-190]  Transmembrane (o-i) [203-225]  Transmembrane (i-o) [240-262]  Transmembrane (o-i) [294-316]  Transmembrane (i-o) [326-345]  Transmembrane (o-i) [352-371]  Transmembrane (i-o) [381-403]  Transmembrane (o-i) [424-446]  Transmembrane (i-o) [507-529]  Transmembrane (o-i)
Transmembrane 14   
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