Meili_00610 : CDS information

Location

Organism	Streptomyces nanchangensis
Strain	NS3226
Entry name	Meilingmycin
Contig	FJ952082
Start / Stop / Direction	132,380 / 129,165 / - [in whole cluster] 132,380 / 129,165 / - [in contig]
Location	complement(129165..132380) [in whole cluster] complement(129165..132380) [in contig]
Type	CDS
Length	3,216 bp (1,071 aa)

Annotation

Category
Product
Product (GenBank)	rhamnosidase
Gene
Gene (GenBank)
EC number
Keyword
Note	This ORF is not involved in meilingmycin biosynthesis.
Note (GenBank)	orf52

Sequence

>[rhamnosidase]
MISRRNLLGTATAAGPALTGLTALAATTGKAEAAEPGYGGLRVEKTTVEYADRPLGLDAP
HPRLSWQLGSDRSNQSQSAYQVRVATSPGRIGAPDVWDSGKVSSHQSVLVPYDGPKPRAR
TRYHWAVRVWDGQGRPSPWSEPTWWETGLGTEDEGAARWVAAPDTVTRGPDLAKADWVWY
PEGDPASNAPAGTRYFRGSFEVSGSVRLARLALVADDGFTAWVNGTEIGGRAPVQENWRH
PVVVDVTALLREGANTIAVAAVNASSSPAGLLGVLELTDADGVRSVTTSAAWKATDAEPS
GDWRLPAYDDGAWAAAKVLAPWGGGPWGRVRAAQRPALVRRDFRLAAKPVARARLYSTAL
GLYEAEINGHRVGRDQLAPGWTDYRKRVQYQTYDVTDLLRRGANAIGVIVASGWYSGSVA
WLGQEQYGERPALRAELEVTYADGSTDRVTTDTHWRCATGPILTADLMAGEEYDARLEAS
GWSSPAFDDALWQSVDVVPADTTSALSVVAQTDAPIRVARELAAVRVTEPKPGVYVFDLG
QNMVGSVRLRVSGEAGRTVRLRHAEVLDKDGMLYTANLRTAQATDSYTLKGSGTETFEPR
FTFHGFRYVEVTGYPGTPDTKAVTGRVMHTGAPFTMSFTTDVPMLNQLHRNITWGQRGNF
LSVPTDTPARDERLGWTGDINVFSATAAYTMESARFLAKWLRDLRDGQSDAGAFPDVAPR
IGNLGEGTAGWGDAGVTVPWNLYQAYGDRQILADNFPAMRAWITYLEQHSSGYLRPAEGY
GDWLNVADETPKDVIATAYFAHSTQLVAKAARVLGHGPAPYDTLAAKVREAFNRAYVSAD
GTVKGDTQTAYVLALSMDLLPDSARTPAADRLVELIRSKDGHLSTGFLGTPRLLPTLTAT
GHTDVAYQLLEQRTFPSWGYQIDRGSTTMWERWDSLRPDGSFQDPGMNSFNHYAYGSVGE
WMYQNITGIGMGEPGFRSIVIRPRPGGDVHEANGRYDSLYGPITTRWTRAKDGAFTLDVS
VPVNTDAEVWLPAATSRAASGISHAGAAFLRLDDGCAVYGVGSGSYRFTAP

>[rhamnosidase]
GTGATCAGCAGAAGGAACCTCCTCGGCACCGCCACCGCTGCGGGCCCCGCCCTGACGGGC
CTGACCGCCCTCGCGGCAACCACCGGGAAAGCCGAGGCAGCCGAGCCCGGATACGGCGGG
CTCCGGGTCGAGAAGACCACCGTGGAATACGCCGACCGCCCGCTCGGCCTGGACGCCCCG
CACCCTCGCCTCAGCTGGCAGCTCGGCTCGGACCGCAGCAACCAGTCGCAGAGCGCGTAC
CAGGTGCGCGTCGCGACCTCTCCGGGCCGGATCGGCGCCCCGGACGTCTGGGACAGCGGC
AAGGTGAGCTCCCACCAGTCCGTTCTGGTCCCGTACGACGGCCCGAAGCCGCGCGCCCGG
ACCCGTTACCACTGGGCCGTCCGGGTCTGGGACGGCCAGGGCCGGCCCTCGCCCTGGAGC
GAGCCCACGTGGTGGGAGACCGGTCTTGGCACCGAGGACGAGGGGGCGGCGAGGTGGGTT
GCCGCGCCGGACACGGTGACCCGGGGTCCCGATCTGGCCAAGGCCGACTGGGTTTGGTAC
CCCGAGGGCGACCCGGCATCCAACGCGCCCGCCGGGACCCGGTACTTCCGGGGCTCCTTC
GAGGTGTCCGGAAGTGTGCGGCTCGCCCGTCTGGCGCTGGTCGCCGACGACGGGTTCACC
GCATGGGTCAACGGCACCGAGATCGGGGGGCGCGCTCCCGTTCAGGAGAACTGGCGCCAT
CCGGTGGTCGTCGATGTCACCGCCCTGCTCCGCGAAGGGGCCAACACCATCGCCGTCGCC
GCGGTCAACGCCTCGTCGAGCCCCGCCGGACTGCTGGGTGTCCTGGAGCTGACCGACGCG
GACGGTGTCCGTTCCGTCACCACCTCCGCCGCCTGGAAGGCCACCGACGCGGAGCCGTCC
GGTGACTGGCGCCTGCCCGCATACGACGACGGCGCCTGGGCCGCCGCCAAGGTGCTCGCC
CCGTGGGGCGGCGGGCCCTGGGGCAGGGTCCGGGCGGCGCAGCGGCCCGCCCTGGTGCGC
CGCGACTTCCGGCTCGCCGCGAAGCCCGTCGCGCGGGCGCGGCTGTACTCGACGGCACTG
GGGCTGTACGAGGCCGAGATCAACGGCCACCGCGTCGGCCGGGACCAGCTCGCCCCCGGC
TGGACCGACTACCGCAAGCGCGTCCAGTACCAGACGTACGACGTCACCGATCTGCTCCGG
CGCGGCGCCAACGCCATCGGTGTGATCGTCGCCTCCGGCTGGTACTCCGGCAGCGTCGCG
TGGCTCGGGCAGGAGCAGTACGGCGAGCGGCCCGCTCTGCGGGCGGAGCTCGAGGTCACG
TACGCCGACGGCAGCACCGACCGCGTCACCACCGACACGCACTGGCGCTGCGCCACGGGC
CCGATCCTGACCGCCGACCTGATGGCCGGAGAGGAGTACGACGCCCGGCTGGAAGCGTCC
GGCTGGTCCTCTCCCGCGTTCGACGACGCCCTCTGGCAATCCGTCGACGTGGTGCCGGCC
GACACCACATCCGCCCTCTCCGTGGTGGCCCAGACGGATGCCCCGATCCGGGTGGCGAGG
GAGCTGGCCGCCGTCCGCGTCACCGAGCCCAAGCCCGGTGTGTACGTCTTCGACCTGGGC
CAGAACATGGTGGGCTCGGTGCGGCTGCGGGTGAGTGGCGAGGCCGGGCGGACCGTGCGG
CTGCGCCACGCCGAGGTCCTGGACAAGGACGGCATGCTCTACACCGCCAATCTGCGCACC
GCCCAGGCGACCGACTCGTACACCCTGAAGGGCTCGGGGACGGAGACGTTCGAACCGCGC
TTCACCTTCCACGGCTTCCGCTATGTCGAGGTCACCGGCTATCCCGGCACCCCGGACACA
AAGGCCGTCACCGGGCGCGTCATGCACACCGGAGCCCCCTTCACCATGTCGTTCACGACC
GATGTGCCCATGCTCAACCAACTGCACCGCAACATCACCTGGGGCCAGCGGGGCAACTTC
CTGTCCGTCCCCACCGACACTCCGGCCCGCGACGAACGGCTCGGGTGGACGGGGGACATC
AACGTCTTCTCCGCCACCGCCGCCTACACCATGGAATCCGCCCGCTTCCTCGCCAAGTGG
CTCCGGGATCTGCGCGACGGGCAGTCCGACGCCGGCGCGTTCCCCGACGTCGCGCCCCGT
ATCGGCAACCTCGGCGAGGGCACGGCCGGCTGGGGCGACGCCGGCGTCACCGTGCCGTGG
AACCTCTACCAGGCCTATGGGGACCGGCAGATACTGGCGGACAACTTTCCCGCGATGCGG
GCCTGGATCACATATCTGGAGCAGCACAGCAGCGGCTATCTGCGGCCTGCGGAGGGGTAC
GGCGACTGGCTCAACGTGGCCGACGAGACCCCCAAGGACGTCATCGCCACCGCGTACTTC
GCGCACAGCACACAGCTGGTCGCCAAGGCCGCGAGGGTGCTGGGTCACGGCCCCGCGCCG
TACGACACGCTGGCCGCGAAGGTCCGCGAGGCGTTCAACCGGGCGTATGTGTCCGCCGAC
GGCACCGTCAAGGGCGACACCCAGACGGCTTACGTCCTGGCGCTGTCCATGGACCTGCTG
CCGGACAGCGCGCGAACACCCGCCGCCGACCGGCTCGTCGAGCTGATCCGAAGCAAGGAC
GGGCATCTGTCCACCGGCTTCCTCGGCACCCCGCGCCTGCTGCCCACGCTCACCGCCACC
GGCCACACCGACGTCGCCTACCAGCTGCTGGAACAGCGGACGTTCCCCTCCTGGGGATAT
CAGATCGACCGGGGCTCGACGACGATGTGGGAGCGCTGGGACTCCCTCAGGCCCGATGGG
AGCTTCCAGGATCCCGGTATGAACTCGTTCAACCACTACGCCTACGGCTCCGTCGGCGAG
TGGATGTACCAGAACATCACCGGCATCGGCATGGGCGAGCCCGGCTTCCGCAGCATCGTC
ATCCGGCCTCGCCCCGGCGGTGACGTACACGAGGCGAACGGGCGCTACGACTCTCTCTAC
GGCCCGATCACCACCCGGTGGACGCGGGCGAAAGACGGCGCGTTCACGCTGGACGTGTCC
GTGCCGGTCAATACGGACGCCGAGGTATGGCTGCCCGCCGCCACCTCCCGCGCCGCGTCC
GGGATCAGCCACGCCGGGGCGGCCTTCCTGCGCCTCGACGACGGCTGCGCCGTCTACGGC
GTGGGCTCCGGCTCGTATCGCTTCACCGCCCCTTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR006311 Twin-arginine translocation pathway, signal sequence (Conserved_site) PS51318 TAT IPR008902 Bacterial alpha-L-rhamnosidase (Domain) PF05592 Bac_rhamnosid IPR008928 Six-hairpin glycosidase-like (Domain) SSF48208 Glyco_trans_6hp IPR008979 Galactose-binding domain-like (Domain) SSF49785 Gal_bind_like IPR013737 Bacterial alpha-L-rhamnosidase N-terminal (Domain) PF08531 Bac_rhamnosid_N IPR013783 Immunoglobulin-like fold (Domain) G3DSA:2.60.40.10 Ig-like_fold IPR016007 Alpha-L-rhamnosidase (Family) PIRSF010631 A-rhamnsds
SignalP	Bacteria, Gram-positive Bacteria, Gram-negative Eukaryota
TMHMM	No significant hit

Meili_00600 Meili_00620