Ncarz_00470 : CDS information

Location

Organism	Streptomyces carzinostaticus
Strain	ATCC 15944
Entry name	Neocarzinostatin
Contig	AY117439
Start / Stop / Direction	74,485 / 74,985 / + [in whole cluster] 74,485 / 74,985 / + [in contig]
Location	74485..74985 [in whole cluster] 74485..74985 [in contig]
Type	CDS
Length	501 bp (166 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
Reference	PmId [15797213] The neocarzinostatin biosynthetic gene cluster from Streptomyces carzinostaticus ATCC 15944 involving two iterative type I polyketide synthases. (Chem Biol. , 2005) comment Neocarzinostatin生合成遺伝子クラスターの報告。 6orf57: Secreted protein (6orf57はorf57の表記間違えか) ncs clusterはncsC4からorf57の領域を最小限含んでいると記述している。このORFについて機能解析されていない。

Sequence

>hypothetical protein
MRTRRILTAAAATAAVTGLGLAAAAPVQAAEYSSALKIKGIQYDAPGRDSNKCTGGNTAS
EYLTIKNYSRSNVNLKGYVVKDAAGNSYTFKTNHILEPGDQVSLRGGRGTDSDAKNVAYR
QNCNFMWNNDKDTIYLYKPGGARADVHSYTQKTNDRDGNGYITYHG

>hypothetical protein
ATGCGCACCCGTCGCATCCTGACCGCCGCCGCAGCCACCGCCGCCGTCACCGGACTCGGC
CTGGCCGCAGCCGCTCCAGTCCAGGCCGCCGAGTACTCCTCGGCCCTGAAGATCAAGGGC
ATCCAGTACGACGCCCCCGGCCGGGACTCCAACAAGTGCACCGGCGGCAACACCGCCAGC
GAGTACCTGACGATCAAGAATTACTCGCGGAGCAACGTCAACCTGAAGGGCTACGTCGTC
AAGGACGCCGCTGGCAACAGCTACACCTTCAAGACCAACCACATCCTCGAGCCCGGTGAC
CAGGTCAGCCTCCGCGGCGGACGAGGCACCGACAGCGACGCCAAGAACGTCGCCTACCGG
CAGAACTGCAACTTCATGTGGAACAACGACAAGGACACCATCTACCTGTACAAGCCCGGC
GGCGCCCGCGCCGACGTCCACTCGTACACGCAGAAGACCAACGACCGCGACGGCAACGGC
TACATCACCTACCACGGGTAG

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR001322 Lamin Tail Domain (Domain) PF00932 LTD IPR006311 Twin-arginine translocation pathway, signal sequence (Conserved_site) PS51318 TAT
SignalP	Bacteria, Gram-negative Eukaryota Bacteria, Gram-positive
TMHMM	Transmembrane 1

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