Niger_00160 : CDS information
Location
Organism | Streptomyces violaceusniger |
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Strain | DSM 4137 |
Entry name | Nigericin |
Contig | DQ354110 |
Start / Stop / Direction | 78,947 / 72,327 / - [in whole cluster] 78,947 / 72,327 / - [in contig] |
Location | complement(72327..78947) [in whole cluster] complement(72327..78947) [in contig] |
Type | CDS |
Length | 6,621 bp (2,206 aa) |
Annotation
Category | 1.1 PKS |
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Product | polyketide synthase |
Product (GenBank) | NIGAVIII |
Gene | |
Gene (GenBank) | nigAVIII |
EC number | |
Keyword | |
Note | |
Note (GenBank) |
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Reference |
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PKS/NRPS Module
13 | methylmalonyl-CoA |
Sequence
>polyketide synthase [NIGAVIII] MSNEEKLLDHLKWVTAELRQTRQRLREAESAEPEPIAIVGMACRYPGGVRSPEELWRLVR DGEDAVSGFPTDRGWGTEELFDPDPESYGKSYVDQGGFCYDATEFDASFFDISPREAQTM DPQQRLLLETAWEAFERAGLTQESLSGSNTGVFAGVGSHDYLSVIGNITSEVEGYVGAGN LGSVVSGRVAYSLGLEGPAVTVDTACSSSLVAIHLACQALRNGECDLALAGGVAVMATPG GFIEFSRQRGMAPDGRCKPFAAAADGTGWGEGSGLIVLERLCEAQRRDRRVLGVIRGSAV NQDGASNGLTAPNGPSQQRVIRQALANAQLSTAEVDAVDGHGTGTTLGDPIEAQALLATY GQGRPEDRPLWLGSIKSNLGHTQAAAGAAGVIKMVMAMRHELLPASLHIDEPTPHADWAS GAVRLLTEPVPWPRGERARRAGVSAFGISGTNAHLILEQAPAPAGTPSVTTVPTDGDGVP AGGVVPWVVSGRGAEALRGQARALAERVATDPDAPPAEVGWSLISTRSVFDHRAVIVGEH RDELLAGLNALATGDTHPTLTEPTTTTGPGAGGMGPVLVFPGQGSQWPGMGAGLLDTSPV FATRIAECEHALTPHVDWSLTEVLRGGVNAADLARVDVVQPVLWAVMISLAAVWDHHGLT PTAVIGHSQGEIAAACVAGALSLDEGARIVALRAHALRRLAGHGAMASLTTSQTHTEELL TNLGEPAREVGIAAVNGPGSVVVSGPPEQVTHAITACEQAGHRARLIDVDYASHSAQVDE IAEELREVLSGIEPVQAEVAFYSTVTGARMDTSGLDTAYWVKNLRERVRFADAVRALLHD GHRVFIEASTHPVLTIGMQETFEEAGVPAAAVPTLRRDHGDQAQLLRSVAQAFTAGVAVD WTRWFRTDPAPRTIDLPTYAFQRRRYWLDGRGGHSGDPGDLGLGSAGHPLLGAAVELAEG GAHLLTGRLSPRTHPWLNDHRVLDTVLLPGTAFAELALHAAARTGCDHVSELTLHAPLVI PQGEAVDVQIAVAAPDHTGERPITVHSRPAAEGDDGAWTRHATGALATSPPANPVSLSGT WPPPGATPLPVEDFYRQLADHGYHYGPSFQGLTAAWRLDGDVYAEVSLPEGEREGAAAYG IHPALFDAALHARALDVAPGSEDARRILLPFTWSGLRLCATGADTLRIRITPTAPDRLAL LAADPTGAAVAVVDDLILRPVPDGQLGRARAAGRNSLFQLVWTRMTPTAPAPTCRSAVIG PDGVPPADALRDAARLPDLAAVRATVTDGAPPPDVVFASFGSSADGRGDPGDPGDPVART HDLGKEALGVLREFLATPEFADARLAVVTRGAVATQSHDDVHDLPASAVWGLVRSAQSEN PGRVLLLDLDERDTSLRSLPDAVASGEPQLALRDGVAYVPRLVHDDAAKRLTPPEGAATW RLGLTGHGSLDQLALVDCPDNTRPLDRGEVRVALRAGGVNFHDVVVALGMVEDPRPLGGD GAGVVVEVGPGTEGFAVGDRVMGLFNGTGPLVVTDVRMITRIPVGWSYAQAATTPSAFLT AYYGLADLAGLRAGEKLLLHAATGGVGLAAVQLARHWQAEVYATAGPTKWHALRERGFDD RHIASSRTLDFEERFRAAAGSVDVVLNSLAGDFVDASLRLLGPGGRFIDMGRTDIRDAEQ VAVRCPGVAYRAFDLVGGAGPDRIQQMLAELSALFENGTLRPLPTTLWDIRRAPEAFRHF SQARHIGKIVLTLPSALDPEGTVLITGGTGTLGAATARHLVAHHGVRRLLLISRRGLDTP GATELAAELTGLGAEVSIAACDAADRAALAKLLETVPGRHPLTAVVHAAGLLRDATVEAL TPDQLDEVLRAKADAAWNLHELTRDAGLSAFVLFSAAAGLLGAAGQGNYAAANAFLDALA VHRHAQGLPATSLAWGYWAEATGMTGGMTDTDRARLARSGMVGLETEQGLALLDIALDSG LPALAPIRLDLAGMRREAHADDLPPLFRSLVRGATPQAATGAAGPGGAAPAEAFAAMSEE DRQQALLKLVRGATATVLGHDTADAIHPTQNFRELGFDSLTAVELRNRLGAATGLRLPAT LVFDHPTPTAVVRLLRELLVPAGVTPTDSLLTGLDSLDTLTGGIADGERRARIAARLREL LRKVDGPWQGAEGDDPAEEDLASASDEELFQALDNELTVPSDDSLR
>polyketide synthase [NIGAVIII] ATGTCGAACGAAGAGAAGCTGCTCGACCACCTCAAGTGGGTCACGGCCGAGTTGCGCCAG ACCCGTCAGCGTCTGCGGGAGGCCGAGTCCGCGGAGCCGGAGCCCATCGCGATCGTGGGC ATGGCCTGCCGCTATCCGGGCGGGGTGCGGTCGCCGGAGGAGCTGTGGCGGCTGGTGCGG GACGGCGAGGACGCCGTTTCCGGCTTTCCCACGGACCGGGGGTGGGGCACCGAGGAGCTG TTCGACCCGGATCCCGAAAGCTATGGGAAGTCCTATGTGGACCAGGGCGGATTCTGCTAT GACGCGACCGAATTCGACGCGTCCTTCTTCGACATCAGCCCCCGCGAGGCCCAGACCATG GACCCGCAGCAGCGGCTGCTCCTGGAGACCGCGTGGGAGGCGTTCGAACGCGCCGGGCTC ACCCAGGAGTCGCTGAGCGGCAGCAACACCGGTGTGTTCGCCGGGGTGGGTTCGCATGAC TATCTGTCGGTCATCGGCAACATCACCAGCGAGGTGGAGGGCTACGTCGGCGCCGGGAAC CTCGGCAGTGTGGTGTCCGGCCGGGTCGCGTACTCGCTCGGCCTCGAGGGCCCGGCGGTC ACGGTGGACACCGCGTGTTCCTCATCGCTGGTCGCCATCCACTTGGCCTGTCAGGCGCTG CGCAACGGCGAATGCGATCTGGCCCTGGCCGGCGGGGTGGCCGTGATGGCGACGCCCGGC GGGTTCATCGAGTTCTCGCGCCAGCGTGGCATGGCCCCGGACGGCCGCTGCAAGCCATTC GCGGCGGCCGCCGACGGCACCGGCTGGGGCGAGGGTTCCGGGTTGATCGTCCTTGAGCGG CTGTGCGAGGCGCAGCGCCGCGACCGCCGTGTCCTCGGGGTGATCCGGGGTTCCGCGGTC AACCAGGACGGGGCCAGCAACGGGCTCACGGCGCCCAACGGTCCGTCGCAGCAGCGGGTG ATCCGGCAGGCGCTGGCCAACGCGCAACTGTCCACCGCCGAGGTGGACGCGGTCGACGGA CACGGCACCGGGACCACCCTCGGCGATCCGATCGAGGCCCAGGCGCTGCTGGCCACGTAC GGGCAGGGCAGGCCGGAGGACCGGCCGCTGTGGCTCGGCTCGATCAAGTCCAACCTGGGG CACACCCAGGCCGCCGCCGGTGCGGCCGGTGTGATCAAGATGGTGATGGCGATGCGGCAT GAGCTGCTGCCCGCCTCGCTGCACATCGATGAGCCGACGCCCCACGCCGACTGGGCGTCG GGTGCGGTGCGGCTGCTGACCGAGCCGGTTCCCTGGCCGCGCGGGGAGCGTGCGCGCCGG GCCGGTGTGTCCGCGTTCGGCATCTCCGGTACGAACGCCCATCTCATCCTGGAGCAGGCA CCCGCCCCCGCCGGGACACCATCCGTCACAACGGTGCCGACCGACGGCGACGGTGTTCCG GCGGGTGGTGTGGTGCCGTGGGTGGTGTCCGGGCGCGGCGCTGAGGCACTGCGCGGTCAG GCGCGGGCGCTGGCCGAACGCGTGGCCACCGACCCCGACGCCCCCCCGGCGGAGGTCGGC TGGTCGCTGATCAGCACCCGCTCCGTCTTCGACCACCGCGCCGTCATCGTCGGCGAACAC CGCGACGAACTCCTCGCCGGGCTCAACGCCCTCGCCACCGGCGACACACACCCCACCCTC ACCGAACCAACCACCACCACCGGCCCCGGCGCGGGCGGCATGGGACCCGTCCTGGTCTTC CCCGGCCAAGGCTCCCAATGGCCCGGCATGGGCGCCGGACTCCTGGACACCTCACCCGTC TTCGCCACCCGCATAGCCGAATGCGAACACGCCCTCACCCCACACGTCGACTGGTCCCTC ACCGAGGTTCTGCGCGGCGGCGTCAACGCAGCCGACCTCGCCCGCGTCGACGTCGTCCAA CCCGTCCTATGGGCCGTCATGATCTCCCTGGCCGCCGTATGGGACCACCACGGCCTCACC CCCACCGCCGTCATCGGCCACTCACAAGGCGAAATCGCCGCAGCCTGCGTCGCCGGAGCC CTCTCCCTCGACGAAGGCGCCCGCATCGTCGCCCTCCGCGCCCACGCCCTCCGACGCCTC GCCGGACACGGCGCCATGGCCTCCCTCACCACAAGCCAAACCCACACCGAAGAACTCCTG ACCAACCTCGGCGAACCAGCCCGCGAAGTCGGCATCGCCGCCGTCAACGGCCCCGGCTCC GTCGTCGTATCCGGACCCCCCGAACAAGTCACCCACGCCATCACCGCATGCGAACAAGCA GGCCACCGGGCCCGGCTCATCGACGTGGACTACGCCTCCCACAGCGCCCAAGTAGACGAA ATCGCAGAAGAGTTGAGGGAAGTGCTGTCGGGGATCGAACCCGTCCAGGCGGAGGTGGCG TTCTATTCGACGGTCACCGGCGCCCGTATGGACACCAGCGGCCTCGACACCGCGTACTGG GTCAAAAACCTCCGCGAACGCGTACGCTTCGCCGACGCCGTACGAGCACTCCTGCACGAC GGCCACCGCGTATTCATCGAGGCCAGCACCCACCCCGTCCTCACCATCGGCATGCAGGAG ACCTTCGAGGAAGCCGGTGTGCCCGCGGCCGCGGTGCCGACCCTGCGCCGGGACCACGGC GACCAGGCGCAGTTGTTGCGGTCGGTGGCGCAGGCGTTCACCGCCGGGGTCGCCGTCGAC TGGACCCGCTGGTTCCGCACCGACCCCGCACCCCGCACCATCGACCTGCCCACCTACGCC TTCCAGCGGCGGCGGTACTGGCTGGACGGGCGGGGTGGCCACAGCGGCGACCCGGGCGAC CTCGGGCTGGGGTCCGCGGGGCATCCGCTGCTCGGCGCGGCCGTGGAACTCGCGGAGGGC GGCGCCCATCTGCTGACCGGCCGACTGTCGCCGCGGACCCATCCATGGCTGAACGACCAC CGGGTGCTGGACACCGTCCTGCTGCCGGGCACCGCCTTCGCCGAGCTCGCCCTGCACGCG GCCGCGCGGACCGGCTGTGACCATGTGTCGGAGCTGACCCTGCACGCGCCACTGGTGATT CCGCAGGGTGAGGCGGTCGATGTGCAGATCGCGGTGGCCGCTCCCGATCACACCGGTGAG CGTCCGATCACGGTGCATTCCCGGCCCGCGGCCGAGGGGGACGACGGGGCCTGGACCCGG CACGCCACCGGCGCACTCGCCACCTCGCCACCAGCCAACCCCGTATCGCTGAGCGGCACT TGGCCGCCTCCCGGAGCCACTCCGCTCCCCGTCGAGGACTTCTACCGGCAGCTCGCCGAC CACGGCTACCACTACGGACCGTCCTTCCAGGGCCTCACCGCCGCATGGCGGCTGGACGGC GATGTCTACGCCGAGGTGTCCCTGCCCGAAGGGGAGCGCGAGGGCGCGGCCGCGTACGGT ATCCACCCCGCCCTCTTCGACGCCGCGCTGCACGCCCGTGCGCTGGACGTCGCCCCCGGC TCCGAGGACGCGCGGCGGATCCTGCTCCCGTTCACCTGGAGTGGTCTGCGGCTGTGCGCC ACCGGGGCGGACACCTTGCGGATCCGCATCACCCCGACGGCACCGGACCGGCTCGCCCTG CTCGCGGCCGATCCAACCGGCGCGGCGGTGGCCGTGGTGGACGATCTGATCCTGCGCCCG GTGCCGGACGGGCAGCTGGGCCGGGCTCGTGCGGCGGGCAGGAACTCCCTCTTCCAGCTC GTCTGGACGCGGATGACACCCACCGCGCCCGCCCCCACGTGCCGTTCCGCGGTGATCGGT CCGGACGGTGTTCCGCCGGCCGACGCACTGCGCGACGCAGCCCGCCTCCCGGACCTCGCC GCCGTGCGGGCGACCGTGACGGACGGCGCCCCGCCCCCCGATGTGGTGTTCGCGTCCTTC GGCTCTTCCGCCGATGGCCGGGGCGATCCGGGCGATCCGGGCGATCCCGTGGCGCGCACC CATGACCTCGGCAAGGAGGCCCTCGGGGTGCTGCGGGAGTTCCTCGCCACGCCCGAATTC GCCGACGCCCGGCTGGCGGTGGTCACCCGTGGGGCGGTCGCCACGCAGAGCCATGACGAT GTCCACGATCTGCCCGCCTCCGCCGTATGGGGCCTGGTGCGCAGCGCCCAGTCGGAGAAC CCCGGCCGGGTCCTGCTGCTCGACCTCGACGAACGCGACACCTCGCTACGGTCCCTGCCC GATGCCGTGGCCTCGGGGGAGCCCCAGCTGGCGCTGCGCGACGGTGTGGCGTACGTACCG CGACTGGTCCACGACGACGCGGCCAAGCGGCTCACCCCGCCGGAAGGGGCGGCCACATGG CGTCTGGGGCTGACCGGCCACGGCAGCCTGGACCAGCTGGCGCTGGTCGACTGCCCGGAC AACACCCGCCCGCTGGACCGTGGCGAGGTCCGGGTGGCGCTTCGGGCGGGCGGGGTGAAC TTCCATGACGTCGTCGTGGCGCTGGGCATGGTGGAGGACCCCAGGCCGCTGGGCGGCGAC GGTGCGGGCGTGGTCGTCGAGGTGGGCCCCGGGACCGAGGGGTTCGCGGTGGGCGACCGG GTCATGGGCCTGTTCAACGGCACCGGGCCGCTGGTCGTCACCGATGTCCGGATGATCACC AGGATCCCCGTAGGATGGTCCTACGCACAGGCGGCGACCACCCCGTCCGCCTTCCTCACC GCCTACTACGGTCTCGCCGATCTCGCGGGGCTGCGGGCCGGGGAGAAACTGCTGCTGCAC GCGGCCACCGGAGGGGTGGGCCTGGCGGCCGTGCAGCTGGCGCGCCACTGGCAGGCCGAG GTGTATGCCACGGCGGGCCCCACGAAGTGGCATGCCCTGCGGGAGCGCGGTTTCGACGAC CGCCATATCGCCTCGTCCCGCACCCTCGACTTCGAGGAGCGGTTCCGCGCCGCCGCCGGA TCCGTCGATGTGGTGCTCAACTCCCTGGCCGGTGACTTCGTGGACGCGTCCTTGCGGCTG CTGGGGCCAGGCGGTCGCTTCATCGACATGGGCCGGACCGACATCCGCGACGCCGAGCAG GTCGCCGTCCGCTGTCCTGGGGTCGCCTACCGAGCGTTCGACCTGGTCGGCGGGGCGGGC CCGGATCGTATCCAGCAGATGCTGGCCGAGTTGTCGGCCCTCTTCGAGAACGGGACGCTG CGGCCGCTGCCGACCACGCTGTGGGACATCCGCCGGGCTCCCGAGGCGTTCCGCCACTTC AGTCAGGCCCGCCACATCGGCAAGATCGTCCTTACGCTCCCCAGCGCCCTCGACCCGGAG GGCACGGTCCTCATCACCGGTGGCACGGGCACGCTCGGCGCCGCCACCGCCCGCCATCTG GTGGCCCACCACGGCGTACGGCGGCTGCTGCTCATCAGCCGCCGGGGCCTCGACACCCCG GGGGCCACGGAGCTGGCTGCCGAACTGACCGGGCTCGGCGCGGAGGTGTCCATCGCGGCG TGTGACGCGGCCGACCGGGCCGCCCTGGCCAAGCTGCTGGAGACCGTTCCCGGCCGCCAT CCGCTCACCGCCGTCGTCCATGCCGCCGGGCTGCTGCGCGATGCCACCGTCGAGGCGCTC ACGCCCGACCAGCTCGATGAGGTGCTGCGGGCGAAGGCCGACGCGGCGTGGAATCTGCAT GAGCTCACCCGCGACGCGGGGCTGTCCGCGTTCGTGTTGTTCTCCGCGGCCGCCGGGCTG CTGGGCGCCGCGGGGCAGGGCAACTACGCGGCGGCCAACGCCTTCCTGGACGCGCTGGCC GTGCACCGCCACGCCCAGGGCCTGCCCGCCACCTCCCTGGCCTGGGGGTACTGGGCCGAG GCCACCGGGATGACCGGCGGGATGACCGACACCGACCGGGCGCGGCTGGCGCGGTCCGGG ATGGTGGGGCTGGAGACCGAACAGGGTCTCGCGCTGCTCGACATCGCCCTCGACAGCGGC CTTCCGGCCCTCGCGCCCATCCGGCTCGACCTGGCCGGCATGCGGCGTGAGGCCCACGCG GACGATCTGCCGCCCCTCTTCAGGAGCCTGGTGCGCGGCGCCACACCGCAGGCGGCCACC GGAGCCGCCGGACCGGGCGGAGCGGCACCGGCGGAGGCGTTCGCCGCCATGTCCGAGGAG GACCGGCAGCAGGCGCTCCTCAAGCTGGTGCGCGGCGCCACGGCGACGGTGCTGGGCCAT GACACGGCGGACGCCATCCACCCCACCCAGAACTTCCGGGAGCTGGGCTTCGACTCACTG ACCGCCGTGGAGCTGCGGAACCGGCTGGGCGCCGCCACCGGTCTGCGGCTGCCCGCCACG CTGGTCTTCGACCACCCCACGCCCACCGCGGTGGTGCGCCTGCTGCGGGAGCTCCTGGTC CCCGCCGGGGTGACGCCGACGGACTCCCTGCTCACCGGGCTCGACTCCCTCGACACCCTG ACCGGGGGAATCGCCGACGGGGAGCGGCGGGCCCGGATCGCGGCGCGGCTGCGGGAGCTG CTGCGCAAGGTGGACGGGCCGTGGCAGGGCGCCGAGGGTGACGACCCCGCCGAGGAGGAT CTGGCGTCGGCCAGCGACGAGGAGTTGTTCCAGGCGCTCGACAACGAGCTGACCGTCCCC TCCGACGACAGTCTCCGATGA
Feature
BLASTP Database:UniProtKB:2011_09 |
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InterPro Database:interpro:38.0 |
IPR001227 Acyl transferase domain (Domain)
IPR006162 Phosphopantetheine attachment site (PTM)
IPR009081 Acyl carrier protein-like (Domain)
IPR011032 GroES-like (Domain)
IPR013154 Alcohol dehydrogenase GroES-like (Domain)
IPR013968 Polyketide synthase, KR (Domain)
IPR014030 Beta-ketoacyl synthase, N-terminal (Domain)
IPR014031 Beta-ketoacyl synthase, C-terminal (Domain)
IPR014043 Acyl transferase (Domain)
IPR015083 Polyketide synthase, docking (Domain)
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase (Domain)
IPR016036 Malonyl-CoA ACP transacylase, ACP-binding (Domain)
IPR016038 Thiolase-like, subgroup (Domain)
IPR016039 Thiolase-like (Domain)
IPR016040 NAD(P)-binding domain (Domain)
IPR018201 Beta-ketoacyl synthase, active site (Active_site)
IPR020801 Polyketide synthase, acyl transferase domain (Domain)
IPR020806 Polyketide synthase, phosphopantetheine-binding domain (Domain)
IPR020807 Polyketide synthase, dehydratase domain (Domain)
IPR020841 Polyketide synthase, beta-ketoacyl synthase domain (Domain)
IPR020842 Polyketide synthase/Fatty acid synthase, KR (Domain)
IPR020843 Polyketide synthase, enoylreductase (Domain)
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SignalP | No significant hit |
TMHMM | No significant hit |