Oxzol_00240 : CDS information

close this sectionLocation

Organism
StrainJA3453
Entry nameOxazolomycin
Contig
Start / Stop / Direction89,340 / 89,984 / + [in whole cluster]
89,340 / 89,984 / + [in contig]
Location89340..89984 [in whole cluster]
89340..89984 [in contig]
TypeCDS
Length645 bp (214 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category4.3 transport
Productputative transporter
Product (GenBank)membrane protein
Gene
Gene (GenBank)ozmS
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[20406823] Oxazolomycin biosynthesis in Streptomyces albus JA3453 featuring an "acyltransferase-less" type I polyketide synthase that incorporates two distinct extender units. (J Biol Chem. , 2010)
comment
oxazolomycin生合成遺伝子クラスターの報告。

ozmR :Transporter

相同性からLysE family of transporterに属していると示唆。
機能解析はされていない。
Related Reference
ACC
P94633
PmId
[8971704] ( , )
comment
Corynebacterium glutamicum
Lysine exporter protein(lysE_Cgl1262)

lysEのnull mutantはL-lysineを排出できなくなったが、過剰発現ではL-lysineの排出が野生型の5倍になった。
Family/Domain
FD
IPR001123
comment
[IPR001123] Lysine exporter protein (LYSE/YGGA) (Family)

close this sectionSequence

selected fasta
>putative transporter [membrane protein]
MRAVIHTVDAMGSTLTAAAAGFGTGLSLIVAIGAQNAFVLRQGVRRQAVLTVVAVCAVSD
AVLIAAGVAGVGAAVTAWPPALTLVGLTGGAFLLSYAVLAARRALRPGAMSAAGATAGSR
RGALLACLAMTWLNPHVYLDTVLLLGSVAAGHGGLRWAFGLGAMLGSVVWFTALGYGARL
LSGFFARPAAWRLLDALIAVMMAAMGLTLVIGAL
selected fasta
>putative transporter [membrane protein]
ATGCGTGCGGTGATCCATACCGTCGACGCCATGGGATCAACACTGACCGCCGCGGCCGCC
GGCTTCGGCACCGGACTCTCGCTCATCGTCGCCATCGGCGCGCAGAACGCCTTCGTCCTG
CGCCAGGGCGTCCGCCGGCAGGCCGTGCTCACCGTAGTGGCCGTCTGCGCCGTGTCCGAC
GCCGTCCTCATCGCCGCGGGTGTCGCCGGGGTCGGCGCGGCGGTGACCGCCTGGCCGCCG
GCGCTCACCCTCGTCGGCCTGACGGGCGGCGCCTTCCTCCTCTCGTACGCCGTGCTCGCC
GCACGCCGCGCCCTGCGGCCCGGGGCGATGTCGGCCGCGGGCGCCACGGCGGGCAGCCGG
CGCGGCGCCCTGCTCGCCTGCCTCGCCATGACCTGGCTGAACCCGCACGTCTACCTCGAC
ACCGTCCTGCTCCTCGGCTCGGTCGCCGCGGGCCACGGCGGGCTGCGGTGGGCCTTCGGG
CTCGGCGCGATGCTCGGCAGCGTCGTCTGGTTCACCGCGCTCGGCTACGGAGCCCGCCTG
CTCAGCGGCTTCTTCGCGCGCCCGGCCGCCTGGCGGCTCCTCGACGCCCTGATCGCCGTC
ATGATGGCGGCCATGGGCCTCACCCTGGTCATCGGCGCGCTCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR001123 Lysine-type exporter protein (LYSE/YGGA) (Family)
 [26-211]  5.49999999999995e-40 PF01810
PF01810   LysE
SignalP
 [1-34]  0.935 Signal
Bacteria, Gram-positive   
 [1-34]  0.576 Signal
Eukaryota   
TMHMM
 [10-32]  Transmembrane (o-i) [52-74]  Transmembrane (i-o) [79-101]  Transmembrane (o-i) [122-144]  Transmembrane (i-o) [154-176]  Transmembrane (o-i) [189-211]  Transmembrane (i-o)
Transmembrane 6   
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