Sch475_00540 : CDS information

Location

Organism	Streptomyces sp.
Strain	SCC-2136
Entry name	Sch 47554
Contig	AJ628018
Start / Stop / Direction	74,051 / 72,198 / - [in whole cluster] 74,051 / 72,198 / - [in contig]
Location	complement(72198..74051) [in whole cluster] complement(72198..74051) [in contig]
Type	CDS
Length	1,854 bp (617 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	putative secreted protein
Gene
Gene (GenBank)	schA33
EC number
Keyword
Note	The N-terminal position was modified from original INSDC entry.
Note (GenBank)
Reference	ACC Q2HR04 PmId [17085966] Angucyclines Sch 47554 and Sch 47555 from Streptomyces sp. SCC-2136: cloning, sequencing, and characterization. (Mol Cells. , 2006) comment angucyclines Sch 47554 and Sch 47555の生合成に関連したentire gene clusterのクローニング、シークエンス、配列解析からの特徴づけ。 schA33はtableにも本文にも記載なし。同定された55ORFsのうち、tableにあるのは50.

Sequence

>hypothetical protein [putative secreted protein]
MCTSHEHDQTLCEAEQAGAGRRNVLRATALIGVATAAVALPAATTQAVPGSKARWRPDPD
SRRFTLAVMPDTQYLFDGPSIDKAPVEASLRYLLEHGRDENIVFLSHLGDLTQNGAKAEC
AAIGQAFRLLDRQGVGYSVLAGNHDVKSSTDDQRGPSPYLDVFGPDRFKGRSTYGGASPD
GYNTFHLFRAAGREWMVLALDWRLSAKGFAWAKDVIAQHPKTPVILTTHELVDEDDSLSS
YGQQLWDQLIEDHDQIFLTLNGHYWPAARATRKNAAGHDVHLHLTNYQNRYFGGAAMIRL
YRFDLDRNTVDVETVSPWILGRAAKGLNELERQESELSGDADRFSVGIDFEERFAGFAPV
PARPARPASKMLIPGTVAYWRFDGKSDGAAVTGTVRDVSGRGNDLSLVTVAGGTLTWSSD
HHPDQPGHGSLDFHGGKPPLKGAYLRTVDGAPLNSATFKAGYTIEAFYRLPADWDPSHDA
WAGLLGRTGTGGAAGKTADDPDEPIATLSLSNDREPQWAMRPLNQQGIATNWGQETPLET
WWHIAVVNDGRHTTLYVQGCPVVRNPKASSVGITSVGLPWILGGYEYAGKIDQILHGRLG
DVRIVERALPVTSFMNH

>hypothetical protein [putative secreted protein]
GTGTGTACTTCGCATGAGCACGACCAGACCCTCTGCGAGGCCGAGCAGGCCGGCGCCGGA
CGACGGAACGTCCTGCGGGCGACCGCGCTGATCGGGGTGGCCACGGCAGCGGTCGCGCTG
CCGGCGGCCACCACGCAGGCGGTGCCGGGCTCGAAGGCCCGTTGGAGACCCGACCCCGAC
AGCCGCCGCTTCACGCTCGCCGTGATGCCCGACACGCAGTACCTGTTCGACGGGCCCAGC
ATCGACAAGGCGCCCGTCGAGGCGTCCCTGCGCTATCTGCTGGAGCACGGGCGCGACGAG
AACATCGTGTTCCTGTCCCACCTCGGCGACCTGACGCAGAACGGCGCGAAGGCGGAGTGC
GCGGCGATCGGCCAGGCGTTCCGGCTGCTCGACCGGCAGGGCGTCGGCTACAGCGTCCTG
GCGGGCAACCACGACGTGAAGTCGTCGACGGACGACCAGCGCGGCCCGAGCCCGTACCTG
GACGTCTTCGGCCCGGACCGCTTCAAGGGCAGGTCCACGTACGGGGGTGCCTCCCCAGAC
GGGTACAACACCTTCCACCTCTTCCGGGCGGCCGGGCGGGAGTGGATGGTGCTCGCGCTG
GACTGGCGGCTGTCGGCGAAGGGCTTCGCGTGGGCCAAGGACGTCATCGCCCAGCACCCG
AAGACTCCGGTGATCCTCACGACGCACGAGCTGGTCGACGAGGACGACTCGCTCTCCTCG
TACGGACAGCAGTTGTGGGACCAGCTGATCGAGGACCACGACCAGATCTTCCTCACCCTC
AACGGCCACTACTGGCCCGCGGCGCGGGCAACTCGCAAGAACGCGGCGGGACATGACGTC
CACCTGCATCTGACGAACTATCAGAACCGGTACTTCGGCGGTGCGGCGATGATCCGGCTC
TACCGCTTCGACCTCGACCGGAACACCGTGGACGTGGAGACGGTGTCGCCGTGGATCCTC
GGCCGGGCCGCGAAGGGGCTCAACGAGCTGGAGCGCCAGGAGAGCGAACTCAGTGGTGAC
GCCGACCGGTTCTCGGTCGGGATCGACTTCGAGGAGCGCTTCGCCGGCTTCGCCCCGGTG
CCCGCGCGCCCGGCGCGTCCCGCGTCGAAGATGCTGATACCGGGCACGGTCGCGTACTGG
CGCTTCGACGGGAAGTCCGACGGGGCCGCCGTGACCGGCACGGTCCGCGATGTGTCCGGG
CGCGGCAACGACCTCTCCCTGGTCACGGTCGCGGGCGGCACGCTCACCTGGTCGTCGGAC
CACCACCCCGACCAACCGGGCCACGGCAGCCTGGACTTCCACGGCGGCAAGCCCCCGCTG
AAGGGCGCGTACCTGCGGACGGTCGACGGCGCGCCCCTCAACTCGGCCACTTTCAAGGCG
GGTTACACCATCGAGGCCTTCTACCGGCTGCCCGCCGACTGGGACCCCTCGCACGACGCG
TGGGCCGGGCTGCTCGGCCGCACCGGTACGGGCGGTGCCGCGGGGAAGACCGCCGACGAC
CCGGACGAACCCATCGCCACGCTGTCGCTGTCGAACGACCGCGAGCCCCAGTGGGCCATG
CGCCCCCTCAACCAGCAGGGAATCGCGACCAACTGGGGCCAGGAGACACCGTTGGAGACG
TGGTGGCACATCGCCGTCGTCAACGACGGAAGGCACACCACCCTGTATGTGCAGGGCTGC
CCGGTGGTGCGCAACCCGAAGGCGTCGTCCGTCGGCATCACCTCCGTCGGCCTGCCCTGG
ATCCTCGGCGGCTACGAGTACGCCGGGAAGATCGACCAGATCCTGCACGGACGGCTCGGT
GACGTGCGGATCGTCGAACGCGCCCTGCCCGTCACGTCGTTCATGAACCACTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR006311 Twin-arginine translocation pathway, signal sequence (Conserved_site) PS51318 TAT IPR008985 Concanavalin A-like lectin/glucanase (Domain) SSF49899 Concanavalin A-like lectins/glucanases IPR013320 Concanavalin A-like lectin/glucanase, subgroup (Domain) G3DSA:2.60.120.200 no description
SignalP	Bacteria, Gram-positive
TMHMM	No significant hit

Sch475_00530 Sch475_00550