Tetrn_00290 : CDS information

Location

Organism	Streptomyces sp.
Strain	NRRL 11266
Entry name	Tetronomycin
Contig	AB193609
Start / Stop / Direction	107,010 / 105,907 / - [in whole cluster] 107,010 / 105,907 / - [in contig]
Location	complement(105907..107010) [in whole cluster] complement(105907..107010) [in contig]
Type	CDS
Length	1,104 bp (367 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	putative membrane protein
Gene
Gene (GenBank)	tmn22
EC number
Keyword
Note	It is supposed that this ORF is not involved in tetronomycin biosynthesis.
Note (GenBank)
Reference	ACC Q1MX60 PmId [18404760] Analysis of the tetronomycin gene cluster: insights into the biosynthesis of a polyether tetronate antibiotic. (Chembiochem. , 2008) comment Streptomyces sp. NRRL 11266におけるtetronomycin (TMN) gene clusterに関する文献。 tmn22(367 aa): hypothetical membrane protein tmn22についてはTable 1.以外の文献中で特に触れられていないが、TMN産生に関与するTMN gene clusterの外側に位置しているtmnDI 破壊株でTMN産生に影響が見られないことより、tmnDI のさらに外側に位置している本ORFはTMN産生に関与しないと考えられている。

Sequence

>hypothetical protein [putative membrane protein]
MTTPAAGSPHGAAPAPAPAPTGPPPEAGRSGTYGVLVVPAVLGLFLVLAFAGLMIPGLRS
PAPTDMPLGLAGPGPTVQQVEAQLAAAAPDAFEVKRYADEAEARTALREQDVLGAIVIGP
SPKQPPGLLIASAAGDAPTTAATTAYEQLTKQLGTPQQVDDVAPLPENDTRGVSAVLLCV
ALTIGALIFQLVLSLAAAHVGAAKRWLSCFCYAVVAGAAGALFAGPVTGTLDGHFLELLG
IATLLSLTVVGIVAACQALLGALGIAVGALLVLPLGLASSGGVVDPHFQPAFYGAVSEYL
PTGSAVSLLRRVLYFDGNAVGGPLLTLLLWAAGAWLVTLVSERIRPFQPLMVIVPASAVG
PAAARTA

>hypothetical protein [putative membrane protein]
GTGACCACACCGGCCGCAGGGTCCCCCCACGGCGCGGCGCCGGCGCCGGCCCCGGCACCG
ACCGGACCGCCCCCGGAAGCCGGCCGCTCCGGCACCTACGGCGTGCTCGTCGTCCCGGCC
GTCCTCGGGCTCTTCCTCGTCCTCGCCTTCGCCGGGCTGATGATCCCCGGACTGCGCAGC
CCCGCCCCGACCGACATGCCCCTCGGCCTGGCCGGCCCCGGCCCGACCGTCCAGCAGGTC
GAGGCGCAGCTCGCCGCCGCCGCCCCCGACGCGTTCGAGGTCAAGCGGTACGCGGACGAG
GCCGAGGCCCGCACCGCCCTGCGCGAGCAGGACGTGCTCGGCGCCATCGTCATCGGACCG
TCGCCGAAGCAGCCGCCCGGCCTGCTCATCGCGAGCGCCGCCGGCGACGCCCCGACGACC
GCGGCCACGACGGCGTACGAGCAGCTGACCAAGCAACTCGGCACCCCGCAGCAGGTGGAC
GACGTCGCCCCGCTGCCGGAGAACGACACCCGCGGCGTCAGCGCCGTGCTGCTGTGCGTC
GCCCTCACCATCGGCGCGCTGATCTTCCAGCTCGTCCTCAGCCTGGCCGCCGCCCACGTG
GGCGCCGCCAAGCGATGGCTGTCCTGCTTCTGCTACGCCGTCGTCGCCGGCGCGGCCGGA
GCCCTCTTCGCCGGACCCGTCACCGGCACCCTCGACGGCCACTTCCTCGAACTGCTGGGC
ATCGCCACCCTGCTGTCGCTGACCGTCGTCGGCATCGTCGCCGCCTGCCAGGCGCTCCTG
GGCGCGCTCGGCATCGCCGTCGGCGCGCTGCTCGTCCTCCCGCTCGGCCTCGCCTCCTCC
GGCGGCGTCGTCGACCCGCACTTCCAGCCCGCCTTCTACGGCGCCGTCTCGGAGTACCTG
CCCACGGGCAGCGCGGTCTCGCTGCTGCGCCGGGTGCTGTACTTCGACGGCAACGCGGTC
GGCGGACCGCTGCTCACGCTGCTGCTGTGGGCGGCCGGCGCCTGGCTCGTCACGCTGGTG
AGCGAGCGGATCAGGCCCTTCCAGCCGCTGATGGTCATCGTGCCCGCCTCCGCCGTGGGC
CCCGCCGCGGCCCGGACGGCCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	No significant hit
SignalP	Eukaryota
TMHMM	Transmembrane 6

Tetrn_00280 Tetrn_00300