Tetrn_00320 Tetrn_00320   last last

Tetrn_00330 : CDS information

close this sectionLocation

Organism
StrainNRRL 11266
Entry nameTetronomycin
Contig
Start / Stop / Direction112,404 / 113,111 / + [in whole cluster]
112,404 / 113,111 / + [in contig]
Location112404..113111 [in whole cluster]
112404..113111 [in contig]
TypeCDS
Length708 bp (235 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)tmn26
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in tetronomycin biosynthesis.
Note (GenBank)
Reference
ACC
PmId
[18404760] Analysis of the tetronomycin gene cluster: insights into the biosynthesis of a polyether tetronate antibiotic. (Chembiochem. , 2008)
comment
Streptomyces sp. NRRL 11266におけるtetronomycin (TMN) gene clusterに関する文献。

tmn26(235 aa): unknown protein

tmn26についてはTable 1.以外の文献中で特に触れられていないが、TMN産生に関与するTMN gene clusterの外側に位置しているtmnDI 破壊株でTMN産生に影響が見られないことより、tmnDI のさらに外側に位置している本ORFはTMN産生に関与しないと考えられている。

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MKRTVVPVAAVAVALIGGCAGEASGCDAEYRLAEVKGEKRPVRIEPGQHHPGLNDRELEE
ALPTPEQEAATNDKVLNHLRRETVRMAGVMGETGRGRCAGEVDRPRGETVRCTVTYEGVT
VPWLVTSKGTTSGMGAFSQDFVYTAKPLKTLHTARSVYDWYAWETGKNGTTEGPLAPVDP
RCDRLPEVFTAEPGDETGYFCQDVSKTCTDDVQHVEWGDRPIRSEENGDLSFLAG
selected fasta
>hypothetical protein [hypothetical protein]
ATGAAGCGAACGGTGGTTCCGGTCGCGGCGGTCGCCGTGGCACTGATCGGCGGCTGTGCC
GGGGAGGCGAGCGGCTGCGACGCCGAGTACCGGCTCGCCGAGGTGAAGGGCGAGAAGCGG
CCGGTGCGGATCGAGCCCGGTCAGCACCACCCCGGGCTGAACGACCGCGAGTTGGAGGAG
GCCCTGCCGACGCCGGAGCAGGAAGCCGCGACGAACGACAAGGTGCTCAACCATCTGCGC
CGGGAGACCGTGCGGATGGCCGGCGTCATGGGCGAGACGGGACGCGGCCGGTGTGCGGGC
GAGGTCGACCGGCCGCGCGGCGAGACCGTCCGCTGCACGGTGACGTACGAGGGTGTGACC
GTGCCCTGGCTGGTGACGAGCAAGGGGACGACGTCGGGCATGGGCGCCTTCAGCCAGGAT
TTCGTCTATACGGCCAAGCCGCTCAAGACCCTGCACACGGCCCGGTCCGTCTACGACTGG
TACGCCTGGGAGACCGGCAAGAACGGCACGACGGAGGGCCCGCTGGCCCCGGTCGACCCG
CGGTGCGACCGGCTGCCGGAGGTCTTCACCGCCGAGCCCGGCGATGAGACCGGCTACTTC
TGCCAGGACGTCTCGAAGACCTGCACCGACGACGTCCAGCACGTGGAGTGGGGCGACCGG
CCGATCCGGTCGGAGGAGAACGGCGACCTGTCGTTCCTCGCCGGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0 		No significant hit
SignalP
[1-21] 0.999 Signal
Eukaryota   
[1-25] 0.982 Signal
Bacteria, Gram-positive   
[1-25] 0.984 Signal
Bacteria, Gram-negative   
TMHMM No significant hit
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