Salino_00330 : CDS information

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Organism
StrainDSM 41398
Entry nameSalinomycin
Contig
Start / Stop / Direction32,952 / 35,351 / + [in whole cluster]
32,952 / 35,351 / + [in contig]
Location32952..35351 [in whole cluster]
32952..35351 [in contig]
TypeCDS
Length2,400 bp (799 aa)
Click on the icon to see Genetic map.

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Category
Product
Product (GenBank)integral membrane protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)

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selected fasta
>[integral membrane protein]
MDRATEAAPPGPSAPAEEPALELLVHGVGGTTPAEMLDDPRTVRITGDERAAVYRRPEDV
HAEDRPPGEAPPEGAEEGGRPRPIPEAYVWSNLTSGNGSRALWLLLLPFMVVNLAHWMRP
SSRHRSRAVRGYGMLVRLAGLTLTLLLTAAACEVALDLTAWQCAGTRACAAEHSWLGFVS
PELSGGGWWSQPGRRLALASLAPAALMGLLWFLSRRTWSAYESALPLPPDAEAKEETSAT
ALAEPGFWYGRRLVARLRAAHTAAGLLTVAAAVGTSAARFDRRDGGPVLLDVLGRVLEGA
LALGFALVLWVVCRRGRSERRADDRRDGRLVRALPAAALALLALSLLYASWSRPRWRSEG
RLPGDFTFGSLVLVQGALVVVLGVVAYVLQRRAPESRTALGGQGGPAVTMLACALGGVMS
GGVAQRVGDWLDGAGTPGQGSWIPGPPVMLTWQASGIPVLLLALLVLFAFLAVRTTRRTR
AGIPQVHRDYPDGPHDIIRTRRIAGTRARARLTDEAPLLVGVTAGFTLLLGAAALAGAWA
TGEVPAEAARGEADFVSGGAQVAQALGSWFIGLGFVLLVTSGRRAYRDASARRTIGILWD
VGTFWPRAAHPFAPPCYAERAVPDLSWRMATWTRTTGGRLVISGHSQGSVLAAAAAWQLS
PAARRRVALLTYGSPLERLYGRWFPAHFGPRTLHALHRDIDCWRNLHRETDPIGGPVRVD
AGEGPEVDRPPLRDPLAYGRTQLLPLPAPILGHSEYQADPAFAEERELLLARLRPAAVPG
PRPGTGEEGTQTSTGTSSG
selected fasta
>[integral membrane protein]
GTGGACCGTGCCACAGAAGCCGCCCCGCCCGGCCCGAGTGCCCCGGCCGAAGAACCGGCC
CTGGAACTCCTGGTGCACGGAGTCGGCGGCACCACACCGGCCGAGATGCTCGACGATCCG
CGGACCGTGCGGATCACCGGCGACGAACGAGCGGCCGTCTACCGCCGCCCCGAGGACGTG
CACGCCGAGGACCGCCCGCCGGGCGAGGCCCCGCCCGAGGGCGCCGAGGAGGGCGGGCGC
CCGCGGCCGATCCCCGAGGCCTACGTCTGGTCCAACCTCACCTCCGGCAACGGCTCCCGC
GCCCTGTGGCTGCTGCTCCTGCCGTTCATGGTGGTCAACCTCGCGCACTGGATGCGCCCC
AGCTCCCGGCACCGCAGCCGCGCCGTCCGCGGCTACGGCATGCTCGTCCGCCTCGCCGGG
CTGACCCTGACCCTGCTGCTGACCGCGGCCGCCTGCGAGGTCGCCCTCGACCTGACCGCC
TGGCAGTGCGCGGGCACCCGGGCCTGCGCCGCCGAGCACTCCTGGCTCGGCTTCGTCTCC
CCGGAGCTGTCCGGCGGGGGCTGGTGGTCCCAGCCGGGGCGGCGGCTCGCCCTCGCCTCA
CTGGCCCCGGCCGCGCTGATGGGGCTGCTCTGGTTCCTCTCCCGCCGGACCTGGAGCGCC
TACGAGTCGGCGCTCCCGCTGCCGCCCGACGCCGAGGCCAAGGAGGAGACCAGCGCCACC
GCCCTCGCCGAACCCGGCTTCTGGTACGGCAGGCGCCTGGTCGCCCGGCTGCGCGCCGCG
CACACCGCCGCCGGGCTGCTCACCGTCGCCGCCGCGGTCGGCACCTCGGCGGCCCGCTTC
GACCGGCGGGACGGCGGCCCCGTACTCCTCGACGTCCTCGGCCGGGTCCTGGAAGGCGCC
CTCGCCCTCGGCTTCGCCCTGGTGCTCTGGGTGGTCTGCCGCCGGGGCCGCAGCGAGCGC
CGGGCCGACGACCGCCGCGACGGGCGCCTGGTGCGCGCGCTGCCCGCCGCGGCGCTCGCC
CTGCTCGCCCTCTCCCTCCTCTACGCCTCCTGGTCCAGGCCCCGTTGGCGCTCCGAGGGC
CGCCTCCCCGGCGACTTCACCTTCGGCTCGCTGGTCCTGGTGCAGGGCGCGCTCGTCGTC
GTCCTCGGGGTGGTCGCCTACGTGCTCCAGCGGCGCGCGCCGGAGTCGCGCACCGCGCTC
GGCGGTCAGGGCGGCCCCGCGGTCACGATGCTCGCCTGCGCCCTCGGCGGGGTCATGTCC
GGCGGCGTCGCCCAGCGGGTCGGCGACTGGCTGGACGGCGCCGGCACCCCGGGCCAGGGC
TCCTGGATCCCGGGCCCGCCGGTCATGCTGACCTGGCAGGCCTCCGGCATACCCGTACTG
CTCCTCGCGCTCCTCGTGCTCTTCGCCTTCCTCGCGGTACGCACCACCAGGCGCACCCGC
GCGGGCATCCCCCAGGTGCACCGCGACTACCCGGACGGGCCGCACGACATCATCCGCACC
CGCCGGATCGCGGGCACCCGCGCCCGGGCCCGGCTCACCGACGAGGCGCCGCTCCTGGTC
GGGGTCACCGCGGGCTTCACCCTGCTCCTCGGGGCCGCCGCGCTCGCCGGTGCCTGGGCC
ACCGGGGAGGTGCCCGCCGAAGCGGCCCGCGGCGAGGCCGACTTCGTCTCCGGCGGCGCG
CAGGTGGCGCAGGCCCTCGGCTCCTGGTTCATCGGACTCGGCTTCGTCCTCCTGGTGACC
TCGGGGCGGCGCGCCTACCGCGATGCCTCGGCCCGCCGCACCATCGGCATCCTCTGGGAC
GTCGGCACCTTCTGGCCGCGCGCCGCGCACCCCTTCGCGCCCCCCTGCTACGCCGAGCGC
GCGGTGCCCGATCTGAGCTGGCGGATGGCCACCTGGACCCGCACCACCGGCGGGCGCCTG
GTGATCTCCGGCCACTCGCAGGGCAGTGTGCTCGCCGCCGCCGCGGCCTGGCAGCTCTCG
CCCGCCGCCCGCCGCCGGGTGGCCCTGCTCACCTACGGCTCCCCGCTGGAACGCCTCTAC
GGCCGCTGGTTCCCGGCCCACTTCGGACCGCGCACCCTGCACGCCCTGCACCGCGACATC
GACTGCTGGCGCAACCTCCACCGGGAGACCGACCCCATCGGCGGCCCGGTGCGGGTGGAC
GCGGGCGAGGGCCCCGAGGTCGACCGGCCCCCGCTGCGCGACCCGCTCGCCTACGGCCGT
ACGCAGCTGCTCCCGCTGCCCGCCCCGATCCTCGGCCACTCCGAGTACCAGGCGGACCCG
GCCTTCGCCGAGGAGCGCGAACTGCTGCTCGCCCGGCTGCGCCCCGCCGCCGTCCCCGGA
CCGCGGCCGGGCACCGGGGAGGAGGGGACTCAGACCAGTACGGGCACGTCCTCCGGGTAG

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
No significant hit
SignalP No significant hit
TMHMM
 [100-117]  Transmembrane (o-i) [129-151]  Transmembrane (i-o) [196-213]  Transmembrane (o-i) [257-279]  Transmembrane (i-o) [294-313]  Transmembrane (o-i) [330-352]  Transmembrane (i-o) [367-389]  Transmembrane (o-i) [402-424]  Transmembrane (i-o) [449-471]  Transmembrane (o-i) [518-540]  Transmembrane (i-o) [560-582]  Transmembrane (o-i)
Transmembrane 11   
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