Salino_00580 Salino_00580   Salino_00600 Salino_00600

Salino_00590 : CDS information

close this sectionLocation

Organism
StrainDSM 41398
Entry nameSalinomycin
Contig
Start / Stop / Direction60,941 / 61,924 / + [in whole cluster]
60,941 / 61,924 / + [in contig]
Location60941..61924 [in whole cluster]
60941..61924 [in contig]
TypeCDS
Length984 bp (327 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category
Product
Product (GenBank)binding-protein-dependent transport systems inner membrane component
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)

close this sectionSequence

selected fasta
>[binding-protein-dependent transport systems inner membrane component]
MSAVAEQKTAPRTETAAAPAGAGRWRRLAGPQNRNLWFWVFVGPFALGLLVFTYVPLGWS
VYLSFFDAHNTVSPTEFVGLDNYTALLRDEAFTDSLWTFAVFTAFIVPTTFVLSLSLALM
VNRLRRAQAFFRSVFFLPAACSYVVAALIWKMSLFNGVRFGLANTVLGWFGAEQTAWLST
TDPPWYWLVIVTVRLWLQAGFYMILFLAALQRISPALYEAAAVDGARPGWQVLRHITLPQ
LRATSVAVVLLLVINAFQAFDEFYNLLSDARGYPPYARPPLVYLYYTALGQGQNLGYGSA
GAVLLALIIAVVTVGQARWFGLGRKED
selected fasta
>[binding-protein-dependent transport systems inner membrane component]
GTGAGCGCAGTCGCCGAGCAGAAGACCGCCCCGCGCACGGAGACCGCGGCGGCACCGGCC
GGGGCGGGGCGGTGGCGGCGCCTGGCCGGGCCGCAGAACCGCAATCTGTGGTTCTGGGTC
TTCGTCGGCCCCTTCGCGCTCGGCCTGCTCGTCTTCACCTACGTCCCGCTGGGCTGGAGC
GTCTACCTCAGCTTCTTCGACGCCCACAACACGGTCTCGCCCACGGAGTTCGTCGGCCTC
GACAACTACACCGCGCTGCTGCGCGACGAGGCCTTCACCGACAGCCTGTGGACCTTCGCG
GTCTTCACCGCCTTCATCGTGCCGACCACCTTCGTGCTCTCGCTCTCCCTCGCGCTGATG
GTCAACCGGCTGCGCCGCGCCCAGGCCTTCTTCCGTTCGGTGTTCTTCCTGCCCGCCGCC
TGCAGCTATGTGGTCGCGGCCCTCATCTGGAAGATGTCCCTCTTCAACGGGGTGCGCTTC
GGCCTCGCCAACACCGTGCTCGGCTGGTTCGGCGCCGAGCAGACGGCCTGGCTCTCCACC
ACCGACCCGCCCTGGTACTGGCTGGTCATCGTCACCGTACGGCTGTGGCTCCAGGCCGGT
TTCTACATGATCCTCTTCCTGGCGGCGCTCCAGCGGATCTCCCCGGCGCTGTACGAGGCG
GCGGCCGTGGACGGGGCCCGGCCCGGCTGGCAGGTGCTGCGCCACATCACCCTGCCGCAG
CTGCGGGCCACCTCGGTGGCGGTGGTGCTGCTGCTCGTCATCAACGCCTTCCAGGCCTTC
GACGAGTTCTACAACCTGCTCTCGGACGCCCGCGGTTACCCGCCCTACGCCCGGCCACCG
CTGGTGTACCTGTACTACACGGCCCTCGGCCAGGGGCAGAACCTCGGCTACGGCAGCGCC
GGCGCGGTCCTGCTCGCGCTGATCATCGCCGTGGTGACGGTCGGCCAGGCGCGCTGGTTC
GGTCTCGGCCGGAAGGAGGACTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR000515 Binding-protein-dependent transport systems inner membrane component (Family)
[112-312] 3.4e-09 PF00528
PF00528   BPD_transp_1
[96-316] PS50928
PS50928   ABC_TM1
SignalP
[1-1] Signal-anchor
Eukaryota   
TMHMM
[36-58] Transmembrane (i-o) [99-121] Transmembrane (o-i) [128-150] Transmembrane (i-o) [185-207] Transmembrane (o-i) [241-260] Transmembrane (i-o) [300-322] Transmembrane (o-i)
Transmembrane 6   
Salino_00580 Salino_00580   Salino_00600 Salino_00600
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