Ansam_00390 Ansam_00390   Ansam_00410 Ansam_00410

Ansam_00400 : CDS information

close this sectionLocation

Organism
StrainATCC 31565
Entry nameAnsamitocin
Contig
Start / Stop / Direction80,922 / 80,605 / - [in whole cluster]
1,825 / 2,142 / + [in contig]
Locationcomplement(80605..80922) [in whole cluster]
1825..2142 [in contig]
TypeCDS
Length318 bp (105 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unknown
Gene
Gene (GenBank)asm36
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[12060743] The biosynthetic gene cluster of the maytansinoid antitumor agent ansamitocin from Actinosynnema pretiosum. (Proc Natl Acad Sci U S A. , 2002)
comment
Actinosynnema pretiosum ssp. auranticum ATCC 31565のcosmid libraryから、ansamitocin生合成に必要な2つのgene clustersをクローニング。

<cluster I>
Asm36(105aa) : Unknown

本文にコメントなし。

close this sectionSequence

selected fasta
>hypothetical protein [unknown]
MVTASAVLCARAGCGAPRPAGATARWRFCSTACKQAAYRLRRKAGSASHEHEDEQLREAL
LALVARARTLTEATPPWSAQATALVGLARRVVELAAARDAGVSGG
selected fasta
>hypothetical protein [unknown]
ATGGTTACCGCAAGTGCGGTCCTGTGCGCCCGCGCGGGCTGCGGCGCGCCCCGTCCCGCA
GGCGCCACGGCCCGCTGGCGCTTCTGCTCCACCGCCTGCAAGCAGGCCGCCTACCGCCTG
CGCCGCAAAGCGGGCAGCGCCTCCCACGAGCACGAGGACGAGCAGCTCCGCGAGGCGCTG
CTCGCCCTCGTGGCACGGGCGCGGACCCTGACCGAGGCCACCCCGCCCTGGTCCGCGCAG
GCCACCGCGCTGGTCGGGCTGGCCCGGCGGGTGGTGGAGCTGGCGGCGGCGCGGGACGCC
GGGGTCAGCGGGGGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro No significant hit
SignalP
[1-24] 0.452 Signal
Bacteria, Gram-positive   
[1-22] 0.745 Signal
Bacteria, Gram-negative   
[1-15] 0.881 Signal
Eukaryota   
TMHMM No significant hit
Ansam_00390 Ansam_00390   Ansam_00410 Ansam_00410
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