Rever_00200 : CDS information

close this sectionLocation

Organism
StrainSN-593
Entry nameReveromycin
Contig
Start / Stop / Direction48,311 / 49,384 / + [in whole cluster]
48,311 / 49,384 / + [in contig]
Location48311..49384 [in whole cluster]
48311..49384 [in contig]
TypeCDS
Length1,074 bp (357 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.2 function unknown
ProductAMP-binding family protein
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)revL
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[21642985] Reveromycin A biosynthesis uses RevG and RevJ for stereospecific spiroacetal formation. (Nat Chem Biol. , 2011)
comment
配列解析によりrevLのfunctionをUnknownとしている。また、revE〜revNでPost-PKS modificationとしている。実験情報は無し。
Family/Domain
FD
IPR000873
comment
[IPR000873] AMP-dependent synthetase/ligase (Domain)
Pfam> Family: AMP-binding (PF00501)

close this sectionSequence

selected fasta
>AMP-binding family protein [hypothetical protein]
MNESLALVDQFLQTDLDEWTRQVVRRHFDPGTGSPYWLKRAAELDFDPLEITRYDELSAL
GPFPLSVLRKLDPADLVPQAVPRPIAGRVFDSGGTTGDPKRILYTPAMLQHRQAWRHWSF
HTEGFRPDGNWVQGTPTGPHVIGLGVQELSSYGGRMYIVDIDPRWVKRLIRAGKLAEADE
YTDHVLGQITNILASQPIDYLNTTSALLTALIRRAPELAAKLKGVRVSGTHCTPAMFRTF
KETLNGGSGAIVGRSYGNTFGTSAGIPDEDDGEILPYLPNYPNVTARVVDKQDWTREVGF
GEQGQVMLNVLHPDLLLPNFLERDQAVRYDTGAAYPCDGVANVMPLQITRNAPEGIY
selected fasta
>AMP-binding family protein [hypothetical protein]
ATGAACGAATCACTGGCTCTGGTCGACCAGTTCCTGCAGACCGACCTCGACGAGTGGACC
CGGCAGGTGGTCCGACGGCACTTCGACCCCGGAACCGGCAGCCCCTACTGGCTCAAGCGC
GCGGCGGAGCTGGACTTCGACCCGCTGGAGATCACCCGCTACGACGAGCTGAGCGCGCTC
GGGCCGTTCCCGCTGTCCGTGCTGCGCAAGCTCGACCCCGCCGACCTGGTTCCCCAGGCG
GTGCCGCGGCCGATCGCCGGCCGGGTCTTCGACTCCGGCGGCACCACCGGCGACCCCAAG
CGCATCCTGTACACGCCCGCCATGCTCCAGCACCGGCAGGCGTGGCGGCACTGGTCGTTC
CACACCGAGGGCTTCCGCCCCGACGGCAACTGGGTGCAGGGCACCCCCACCGGACCGCAC
GTGATCGGCCTCGGCGTCCAGGAACTGTCGTCCTACGGCGGGCGGATGTACATCGTCGAC
ATCGACCCGCGGTGGGTCAAGCGGCTCATCCGCGCCGGCAAGCTCGCCGAGGCCGACGAG
TACACCGACCACGTCCTCGGCCAGATCACCAACATCCTTGCCAGCCAGCCGATCGACTAC
CTCAACACCACGTCGGCCCTGCTCACCGCCCTCATCCGGCGCGCCCCGGAGCTGGCCGCG
AAGCTCAAGGGCGTACGGGTCAGCGGCACCCACTGCACCCCGGCCATGTTCCGCACGTTC
AAGGAGACCCTCAACGGCGGCAGCGGCGCCATCGTGGGGCGCAGCTACGGCAACACCTTC
GGCACCTCGGCCGGCATCCCGGACGAGGACGACGGCGAGATCCTGCCGTACCTGCCGAAC
TACCCCAACGTCACCGCCCGCGTGGTCGACAAGCAGGACTGGACCCGCGAGGTCGGGTTC
GGCGAGCAGGGCCAGGTCATGCTGAACGTCCTGCACCCCGACCTGCTCCTGCCCAACTTC
CTCGAACGGGACCAGGCCGTCCGGTACGACACCGGCGCCGCCTACCCCTGCGACGGCGTC
GCCAACGTCATGCCCCTCCAGATCACCAGGAACGCCCCGGAGGGCATCTACTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR000873 AMP-dependent synthetase/ligase (Domain)
 [93-307]  4.9e-06 PF00501
PF00501   AMP-binding
SignalP No significant hit
TMHMM No significant hit
Page top