Madu_00340 Madu_00340   Madu_00360 Madu_00360

Madu_00350 : CDS information

close this sectionLocation

Organism
StrainATCC 39144
Entry nameMaduropeptin
Contig
Start / Stop / Direction55,667 / 54,864 / - [in whole cluster]
55,667 / 54,864 / - [in contig]
Locationcomplement(54864..55667) [in whole cluster]
complement(54864..55667) [in contig]
TypeCDS
Length804 bp (267 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unknown
Gene
Gene (GenBank)mdpE11
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[17918933] Characterization of the maduropeptin biosynthetic gene cluster from Actinomadura madurae ATCC 39144 supporting a unifying paradigm for enediyne biosynthesis. (J Am Chem Soc. , 2007)
comment
Maduropeptin生合成遺伝子クラスターの報告

mdpE11: Unknown

12のORFs(MdpE through MdpE11)はenediyne core生合成に関与すると言っている。
機能解析はされていない。

close this sectionSequence

selected fasta
>hypothetical protein [unknown]
MSESRNVFDDLAAEADVIDRLVAEIHESDWRAESPAPGWTVFDQLAHLTFIFRLAGTAAA
DAAKFQKMIEGAEADFNGAVNAALAEFKGDSPAELLRKWREARDFAVPALAAVPGDQVVP
WLVRPLPAAILACAGIMECFGHGQDIADTLGVRREPTDRLVHLVGFAILVQEFGYQSRGL
TQPDVEFRFEITAPSGELWAFGPEDSPERITGSALDFCMLVTRRRHRADLDVVATGAEAE
RWLDIAQAYRGPAGEGRRPGQFAAARG
selected fasta
>hypothetical protein [unknown]
ATGTCGGAGTCGCGGAACGTGTTCGACGACCTGGCCGCCGAGGCCGACGTCATCGATCGG
CTGGTCGCGGAAATTCACGAATCGGACTGGCGGGCCGAATCGCCCGCTCCCGGATGGACG
GTGTTCGACCAGCTCGCCCATCTCACGTTCATCTTCCGGCTCGCCGGAACGGCCGCCGCC
GACGCGGCGAAGTTCCAGAAGATGATCGAGGGGGCGGAGGCCGACTTCAACGGCGCGGTG
AACGCCGCGCTGGCCGAATTCAAGGGCGACTCGCCGGCGGAACTGCTGCGGAAATGGCGG
GAGGCGCGGGACTTCGCGGTGCCCGCGCTGGCGGCGGTGCCCGGCGACCAGGTGGTGCCG
TGGCTGGTCCGGCCGCTGCCCGCGGCGATCCTCGCCTGCGCGGGGATCATGGAGTGCTTC
GGGCACGGCCAGGACATCGCCGACACGCTGGGCGTCCGCCGCGAGCCCACCGACCGGCTC
GTCCACCTGGTGGGCTTCGCGATCCTCGTCCAGGAGTTCGGCTACCAGTCCCGGGGCCTG
ACCCAGCCGGACGTCGAGTTCCGCTTCGAGATCACGGCCCCGTCGGGCGAGCTGTGGGCG
TTCGGCCCGGAGGACTCGCCGGAGCGGATCACCGGGTCCGCGCTCGACTTCTGCATGCTG
GTGACGCGGCGCCGGCACCGCGCGGACCTCGACGTGGTCGCGACCGGCGCGGAGGCCGAG
CGCTGGCTCGACATCGCGCAGGCGTACCGGGGCCCGGCGGGCGAGGGGCGCCGGCCGGGG
CAGTTCGCCGCGGCGCGGGGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR013917 tRNA wybutosine-synthesis (Domain)
[186-235] 3.2e-05 PF08608
PF08608   Wyosine_form
IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type (Family)
[10-224] 3.5e-41 TIGR03083
TIGR03083   TIGR03083
IPR017518 Conserved hypothetical protein CHP03084 (Family)
[6-257] 4.30000000000003e-92 TIGR03084
TIGR03084   TIGR03084
IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain (Domain)
[11-147] 6.90000000000001e-26 PF11716
PF11716   MDMPI_N
SignalP No significant hit
TMHMM No significant hit
Madu_00340 Madu_00340   Madu_00360 Madu_00360
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