C1027_00060 : CDS information

Location

Organism	Streptomyces globisporus
Strain	C-1027
Entry name	C-1027
Contig	AY048670
Start / Stop / Direction	5,982 / 7,478 / + [in whole cluster] 5,982 / 7,478 / + [in contig]
Location	5982..7478 [in whole cluster] 5982..7478 [in contig]
Type	CDS
Length	1,497 bp (498 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	glycerol phosphate ABC transporter
Gene	sgcB1
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	ORF(-2)
Reference	ACC Q8GMI4 PmId [12183628] Biosynthesis of the enediyne antitumor antibiotic C-1027. (Science. , 2002) comment C-1027の生合成遺伝子クラスターの報告 Orf(-3)の欠損株はC-1027産生に影響を及ぼさなかったことから、SgcB1-SgcR3を生合成クラスタ−と提案している。このORFは機能解析されていない。

Sequence

>hypothetical protein [glycerol phosphate ABC transporter]
MRALPGSGGLRMAGDAPTAAGNRRCPPTPIQRPLILRRQTLQAPEAKNGRSPEQPQEERI
VLDVWLANYPFPTYDGRDFLAPLRERAAEFERAHPRYRVDINGHDFWTIPEKVARATAEG
RPPHIAGYYATDSQLARDARRPDGKPVFTSVEAALAGRTEILGHPVVVEDLDPVVRDSYS
FGGELVSLPLTVTTMLCYANSSLLARAGVPELPRTWDEVEAACQAVASVDGGPGHGITWA
NDGWVFQQAVALQNGVLTDQDNGRSGSATTVDVTSDEMLDWVRWWTHLHERGHYLYTGGP
SDWGGAFEAFVQQKVAFTFDSSKAARELIQAGAQAGFEVAVFPLPRNAKAPVAGQPVSGD
SLWLAAGLDETTQDGLLALTQYLISPANAADWHRTNGFVPVTGAAGELLEATGWFDRRPQ
QRVAGEQLKASDRSPAALGALLGDFAAVNEVITAAMDDVLRSGADPAKAFAEAGVAAQQL
LDAYNARNRSGSGTPSAV

>hypothetical protein [glycerol phosphate ABC transporter]
GTGAGGGCTCTGCCGGGAAGTGGCGGATTGCGCATGGCAGGAGATGCCCCGACAGCGGCC
GGGAATCGACGATGTCCCCCGACCCCTATCCAGCGTCCGCTGATCCTCAGGAGGCAGACC
TTGCAGGCTCCAGAAGCGAAGAACGGCCGGTCCCCGGAGCAGCCGCAGGAAGAGCGGATC
GTCCTGGACGTATGGCTGGCGAACTACCCGTTCCCCACCTATGACGGGCGTGACTTCCTC
GCTCCGCTGCGCGAGCGGGCGGCGGAGTTCGAGCGCGCCCACCCCCGATACCGGGTCGAC
ATCAACGGCCACGACTTCTGGACCATCCCCGAGAAGGTGGCGCGCGCCACCGCGGAGGGC
AGGCCTCCGCACATAGCGGGCTACTACGCCACCGACAGCCAGTTGGCGCGGGACGCGCGC
AGGCCCGACGGGAAGCCGGTCTTCACCTCGGTGGAGGCCGCGTTGGCCGGCCGGACGGAG
ATACTGGGACACCCGGTGGTGGTGGAGGACCTCGACCCCGTGGTGCGCGACTCCTACTCG
TTCGGGGGCGAGTTGGTGTCGCTGCCGCTCACGGTCACCACCATGCTCTGCTACGCCAAC
TCCTCCCTCCTCGCGCGCGCCGGTGTTCCGGAGTTGCCCCGTACCTGGGATGAGGTCGAA
GCAGCCTGCCAGGCGGTGGCCAGCGTCGACGGGGGGCCCGGTCACGGAATCACCTGGGCC
AACGACGGCTGGGTTTTCCAGCAGGCCGTCGCCCTTCAGAACGGGGTGCTGACCGATCAG
GACAACGGCCGCTCCGGCTCCGCCACGACGGTGGACGTCACATCGGACGAGATGCTGGAC
TGGGTCCGCTGGTGGACGCACCTCCATGAGCGCGGCCATTACCTCTACACGGGCGGGCCC
TCGGACTGGGGCGGGGCGTTCGAGGCTTTCGTCCAGCAGAAGGTCGCATTCACCTTCGAC
TCGTCCAAGGCCGCCCGGGAACTCATCCAGGCCGGTGCACAGGCCGGTTTCGAGGTCGCG
GTGTTCCCGTTGCCCAGGAACGCGAAGGCCCCGGTAGCGGGCCAGCCCGTCTCGGGAGAC
TCCCTGTGGCTGGCCGCGGGACTCGACGAGACCACGCAGGACGGGCTGCTCGCTCTCACC
CAGTACCTGATCAGCCCGGCCAACGCCGCGGACTGGCACCGCACCAACGGTTTCGTACCG
GTGACCGGCGCGGCCGGGGAACTGCTGGAAGCGACAGGCTGGTTCGACCGCCGGCCGCAG
CAACGGGTGGCCGGGGAGCAGTTGAAGGCGTCCGACCGGTCACCGGCGGCGCTCGGCGCG
CTGCTCGGCGACTTCGCGGCCGTCAACGAGGTCATCACCGCAGCGATGGACGATGTCCTG
CGCAGTGGAGCGGACCCCGCGAAGGCCTTCGCCGAAGCCGGCGTGGCCGCCCAGCAACTG
CTCGATGCCTACAACGCCCGGAACCGCTCCGGATCCGGGACCCCCTCCGCCGTCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	No significant hit
SignalP	No significant hit
TMHMM	No significant hit

C1027_00050 C1027_00070