Calm_00260 : CDS information

Location

Organism	Micromonospora echinospora
Strain	NRRL 15839
Entry name	Calicheamicin
Contig	AF497482
Start / Stop / Direction	30,072 / 28,696 / - [in whole cluster] 30,072 / 28,696 / - [in contig]
Location	complement(28696..30072) [in whole cluster] complement(28696..30072) [in contig]
Type	CDS
Length	1,377 bp (458 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	CalR5
Gene
Gene (GenBank)	calR5
EC number
Keyword
Note
Note (GenBank)
Reference	ACC Q8KNH1 PmId [12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002) comment calicheamicin生合成遺伝子クラスターの報告このORFは、Fig2の生合成clusterにて、putative regulatory elements(R1 to R9)と示されているのみ。本文中では特にふれていない。

Sequence

>hypothetical protein [CalR5]
MRTPSPQETVEIALAAAGGDDCVVIVERGADVHVRWADNALTGNGSGDERRVSVVAVAGG
RVGAVSLCGPADRAEVVGLVEAARSAARQAPPAPDARPLPTPGAGSPHWGDPVPAASPTV
LTGLVDQLAAGFGRARRGGRVLHGYAEHRMRSTFLGTSTGVRLRHDEPAGHLELTARDRD
GFPVWTNAVTTDFGDVSVAALQDELDRRLHWGRRRFEVPPGRYECLLPPTAVADLMNYAY
TTAGARAAAQGRTVYSGPGGRTRIGEQLAGVPLTLRSDPTADGLRCAPFLVAPASTPTRS
VFDNGLPLGATRWWDEGRLRSLVHTRDSADELGMPLTPAVDNLILEGPDGASAADLIATT
RRGLLVTSLWYIREVDLATMALTGLTRDGVYLVRDGEVVGAVNNFRFNDSPLAMAARVTE
VGRTVPTRARDWGDAVARTAMPMLRVQDFRLTAATNAV

>hypothetical protein [CalR5]
GTGAGGACCCCGAGCCCGCAGGAGACGGTGGAGATCGCCCTCGCCGCGGCGGGCGGCGAC
GACTGCGTGGTGATCGTGGAGCGGGGCGCCGACGTGCACGTGCGCTGGGCGGACAACGCG
CTGACCGGCAACGGGAGCGGCGACGAGCGCCGGGTGTCGGTGGTGGCCGTCGCGGGCGGC
CGGGTGGGGGCGGTGTCGCTGTGCGGGCCGGCCGACCGGGCGGAGGTGGTCGGGCTGGTC
GAGGCGGCGCGGTCGGCCGCCCGCCAGGCGCCGCCGGCGCCGGACGCGCGGCCCCTGCCC
ACCCCCGGTGCCGGGTCGCCGCACTGGGGGGACCCGGTCCCGGCGGCGTCGCCGACGGTG
CTGACCGGGCTGGTCGACCAGTTGGCCGCCGGGTTCGGCCGGGCGCGGCGCGGCGGCCGG
GTGCTGCACGGGTACGCCGAGCACCGGATGCGCAGCACGTTCCTCGGCACCTCCACCGGC
GTGCGGCTGCGCCACGACGAGCCCGCCGGGCACCTGGAGTTGACCGCGCGCGACCGGGAC
GGCTTCCCGGTCTGGACGAACGCCGTGACCACCGACTTCGGCGACGTGTCGGTGGCCGCG
CTGCAGGACGAGCTGGACCGGCGCCTGCACTGGGGCCGGCGGCGGTTCGAGGTGCCGCCC
GGCCGCTACGAGTGCCTGCTGCCGCCGACCGCCGTCGCCGACCTGATGAACTACGCCTAC
ACCACGGCGGGAGCCCGGGCGGCGGCGCAGGGCCGGACGGTCTACAGCGGCCCGGGGGGC
CGGACCCGGATCGGGGAGCAGCTCGCCGGCGTGCCGCTGACCCTGCGCAGCGACCCGACG
GCCGACGGGCTGCGCTGCGCCCCGTTCCTGGTGGCGCCCGCGTCGACGCCGACGAGGTCG
GTGTTCGACAACGGCCTGCCGCTCGGCGCGACCCGCTGGTGGGACGAGGGCCGGCTGCGC
TCGCTGGTGCACACCCGCGACAGCGCGGACGAGCTGGGCATGCCGCTCACGCCCGCGGTG
GACAACCTCATCCTGGAGGGGCCGGACGGTGCGTCGGCCGCCGACCTGATCGCGACGACC
CGGCGTGGCCTGCTGGTGACGAGCCTCTGGTACATCCGCGAGGTGGACCTCGCCACCATG
GCCCTCACCGGGCTGACCCGGGACGGTGTCTACCTGGTGCGTGACGGCGAGGTCGTCGGG
GCGGTCAACAACTTCCGCTTCAACGACAGCCCGCTGGCGATGGCCGCCCGGGTCACCGAG
GTGGGCCGGACCGTGCCGACCCGGGCCCGCGACTGGGGCGACGCGGTGGCGCGTACGGCC
ATGCCGATGCTGCGCGTCCAGGACTTCCGGCTCACCGCCGCGACCAACGCGGTCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR002510 TldD/PmbA (Family) PF01523 PmbA_TldD
SignalP	No significant hit
TMHMM	No significant hit

Calm_00250 Calm_00270