Dynm_00070 : CDS information

Location

Organism	Micromonospora chersina
Strain	ATCC 53710 (=NBRC 15963)
Entry name	Dynemicin
Contig	EF552206
Start / Stop / Direction	14,521 / 14,054 / - [in whole cluster] 14,521 / 14,054 / - [in contig]
Location	complement(14054..14521) [in whole cluster] complement(14054..14521) [in contig]
Type	CDS
Length	468 bp (155 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	unkown protein
Gene
Gene (GenBank)
EC number
Keyword
Note	This ORF is not involved in dynemicin A biosynthesis.
Note (GenBank)	ORF8
Reference	ACC B2BM22 PmId [18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008) comment Dynemicin生合成遺伝子クラスターの報告。 orf8 Unknown protein orf8欠損株は、dynemicin Aの生合成が確認されたことより必須遺伝子ではないとしている。機能解析はされていない。

Sequence

>hypothetical protein [unkown protein]
MQRLIRRIGIAAAVAAVLVGVAGTGAQAAAVNPYTPEALCGPGFVAVDQDPIHDTATGAR
LGTVHLLRNPLTGYGCTVTLKSAYVGTLTGTRVYLDPEWTAFGVDDGSRRYAAGPVHRYI
GAGCAIWGGSMTDPAGAVHQHDRANPAIGGAVTCF

>hypothetical protein [unkown protein]
ATGCAGCGGCTCATTCGACGAATCGGGATCGCGGCGGCCGTGGCGGCCGTCCTCGTCGGG
GTGGCGGGGACCGGCGCGCAGGCGGCGGCGGTCAACCCGTACACCCCGGAGGCGCTCTGC
GGCCCGGGCTTCGTCGCCGTCGACCAGGACCCGATCCACGACACCGCCACCGGCGCGCGG
CTCGGCACCGTCCACCTGCTGCGCAACCCCCTCACCGGGTACGGCTGCACGGTCACCCTC
AAGTCCGCGTACGTCGGGACGCTCACCGGGACCCGCGTCTACCTGGATCCGGAATGGACC
GCCTTCGGCGTCGACGACGGCAGCCGGCGCTACGCGGCCGGCCCGGTCCACCGCTACATC
GGCGCGGGTTGTGCCATCTGGGGCGGGTCGATGACCGACCCCGCCGGCGCCGTCCACCAG
CACGACCGCGCGAACCCGGCCATCGGCGGGGCGGTCACCTGCTTCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro	No significant hit
SignalP	Eukaryota Bacteria, Gram-negative Bacteria, Gram-positive
TMHMM	Transmembrane 1

Dynm_00060 Dynm_00080