Dynm_00120 : CDS information

Location

Organism	Micromonospora chersina
Strain	ATCC 53710 (=NBRC 15963)
Entry name	Dynemicin
Contig	EF552206
Start / Stop / Direction	20,201 / 19,092 / - [in whole cluster] 20,201 / 19,092 / - [in contig]
Location	complement(19092..20201) [in whole cluster] complement(19092..20201) [in contig]
Type	CDS
Length	1,110 bp (369 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	putative xanthine/CO dehydrogenases maturation factor
Gene	dynE12
Gene (GenBank)
EC number
Keyword
Note	The N-terminal position was modified from original INSDC entry.
Note (GenBank)	ORF13; XdhC/CoxF family
Reference	ACC B2BM27 PmId [18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008) comment Dynemicin生合成遺伝子クラスターの報告。 dynE12 Putative dehydrogenases maturation factor; XdhC/CoxF family 機能解析はされていない。

Sequence

>hypothetical protein [putative xanthine/CO dehydrogenases maturation factor]
MRDVLPDLLRWWRAGVPVGMATVARTWQSAPRRPGATLLVGPDGSAVGSVSGGCVEAAVY
ELCREVVADATPRSVRFGVSDDDALAAGLTCGGTVELYVERVDRESFPQLDRVAAEVAAG
RPVAVATCVDGPPGRRGRRIVLDAEGRHGSLGEPAVDAAVAAEARALLRAGRSGVVRPRP
VGEELSVLVVAAPAPARMLVFGAVDFAAAVAQAGRFLGYRVTVCDARPVFATPRRFPGAH
EVVVDWPHRYLAAEAAAGRVDARTVVCVLTHDARFDVPVLRHALDLPLAYVGAMGSRRTA
EDRRRRLREAGVTEAALARLRAPIGLDLGGQTPEETAVSIAAEIVAVTRGGGGVPLSRLA
GRIHADAPR

>hypothetical protein [putative xanthine/CO dehydrogenases maturation factor]
ATGCGTGACGTCCTGCCCGACCTGCTGCGCTGGTGGCGTGCCGGCGTGCCGGTCGGCATG
GCCACGGTGGCCCGCACCTGGCAGAGCGCCCCGCGCCGGCCCGGTGCCACGCTGCTGGTC
GGGCCGGACGGCAGCGCGGTCGGCAGTGTCTCCGGCGGCTGCGTGGAGGCGGCGGTCTAC
GAGCTGTGCCGGGAGGTCGTCGCCGACGCCACGCCGCGGTCGGTCCGCTTCGGGGTGAGC
GACGACGACGCACTGGCCGCCGGCCTCACCTGCGGCGGGACCGTCGAGCTGTACGTGGAG
CGGGTCGACCGGGAGAGCTTCCCGCAGCTCGACCGGGTCGCCGCCGAGGTCGCCGCTGGC
CGGCCCGTGGCGGTCGCGACCTGTGTGGACGGCCCGCCGGGCCGGCGGGGCCGGCGGATC
GTGCTGGACGCCGAGGGGCGGCACGGCAGCCTGGGCGAGCCGGCCGTGGACGCGGCGGTC
GCCGCCGAGGCGCGGGCGCTGCTGCGCGCGGGCCGCTCCGGCGTGGTCCGCCCCCGGCCG
GTCGGGGAGGAGCTGTCCGTGCTGGTGGTGGCCGCTCCGGCGCCGGCCCGGATGCTGGTC
TTCGGGGCCGTCGACTTCGCAGCCGCGGTGGCCCAGGCGGGCCGGTTCCTCGGCTACCGG
GTGACGGTCTGCGACGCCCGGCCGGTCTTCGCCACCCCGCGGCGGTTCCCCGGGGCGCAC
GAGGTGGTGGTCGACTGGCCGCACCGCTACCTGGCCGCCGAGGCCGCGGCCGGCCGGGTC
GACGCCCGGACCGTGGTCTGCGTACTCACCCACGACGCCCGCTTCGACGTGCCGGTCCTG
CGCCACGCTCTCGACCTGCCGCTGGCGTACGTCGGGGCGATGGGCTCCCGGCGCACCGCC
GAGGACCGGCGACGCCGCCTGCGCGAGGCCGGCGTGACCGAGGCGGCACTGGCCCGGCTG
CGCGCCCCGATCGGCCTGGACCTGGGCGGGCAGACGCCGGAGGAGACCGCCGTCAGCATC
GCCGCCGAGATCGTGGCGGTGACGCGCGGCGGTGGCGGCGTCCCGCTGTCCCGCCTGGCG
GGCCGCATCCACGCGGACGCGCCCCGCTAG

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR003777 XdhC- CoxI (Family) PF02625 XdhC_CoxI
SignalP	No significant hit
TMHMM	No significant hit

Dynm_00110 Dynm_00130