Dynm_00260 : CDS information

Location

Organism	Micromonospora chersina
Strain	ATCC 53710 (=NBRC 15963)
Entry name	Dynemicin
Contig	EF552206
Start / Stop / Direction	39,223 / 39,798 / + [in whole cluster] 39,223 / 39,798 / + [in contig]
Location	39223..39798 [in whole cluster] 39223..39798 [in contig]
Type	CDS
Length	576 bp (191 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	unkown protein
Gene	dynU20
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	ORF16
Reference	ACC B2BM41 PmId [18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008) comment Dynemicin生合成遺伝子クラスターの報告。 dynU20 Unknown protein 機能解析はされていない。

Sequence

>hypothetical protein [unkown protein]
MTSADPRRGVALRRVPAALVLLIGAVVLLRPLFRVPEDPVVTATPARGAVLAAAPPAVEL
AFGSRPRRGDAHVTVTAAAGQRVDRGVATIQGTGVRETLPPLDEGWYVVAYHVTLTDGSE
PSGAYAFAVGRPAGPPPPVDADAAAPAEAEGHAGHAGPPDPLTLAVLAANAVVLVVLGAR
LVWWRRRRRSG

>hypothetical protein [unkown protein]
ATGACCTCAGCGGATCCCCGCCGGGGCGTGGCGCTGCGCCGCGTCCCGGCGGCGCTGGTG
CTGCTGATCGGCGCGGTGGTGCTGCTGCGGCCGCTGTTCCGGGTGCCGGAGGACCCGGTG
GTGACCGCCACGCCGGCCCGCGGGGCGGTGCTCGCCGCCGCCCCGCCGGCCGTGGAGCTG
GCCTTCGGCAGCCGCCCTCGCCGGGGCGACGCGCACGTCACGGTCACCGCCGCCGCCGGG
CAGCGGGTCGATCGCGGCGTGGCCACGATCCAGGGCACGGGGGTACGCGAGACGCTGCCC
CCGCTCGACGAGGGCTGGTACGTGGTGGCGTACCACGTGACCCTCACCGACGGGTCCGAG
CCCAGCGGCGCGTACGCCTTCGCGGTCGGCCGTCCGGCGGGCCCGCCGCCACCGGTGGAC
GCCGACGCGGCGGCGCCCGCGGAGGCCGAGGGCCACGCCGGCCACGCCGGGCCGCCCGAT
CCGCTGACCCTGGCGGTGCTGGCCGCCAACGCCGTGGTGCTGGTGGTGCTGGGCGCCCGG
CTGGTCTGGTGGCGACGCCGCCGGAGGTCCGGATGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR007348 CopC domain (Domain) PF04234 CopC IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like (Domain) G3DSA:2.60.40.1220 Cu-resist/internalin_Ig-like IPR014756 Immunoglobulin E-set (Domain) SSF81296 Ig_E-set
SignalP	No significant hit
TMHMM	Transmembrane 2

Dynm_00250 Dynm_00270