Dynm_00330 Dynm_00330   Dynm_00350 Dynm_00350

Dynm_00340 : CDS information

close this sectionLocation

Organism
StrainATCC 53710 (=NBRC 15963)
Entry nameDynemicin
Contig
Start / Stop / Direction48,871 / 47,735 / - [in whole cluster]
48,871 / 47,735 / - [in contig]
Locationcomplement(47735..48871) [in whole cluster]
complement(47735..48871) [in contig]
TypeCDS
Length1,137 bp (378 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.1 general function
Productputative oxidoreductase
Product (GenBank)FAD-dependent oxidoreductase
GenedynE13
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF23
Reference
ACC
PmId
[18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008)
comment
Dynemicin生合成遺伝子クラスターの報告。

dynE13 FAD-dependent oxidoreductases
genbank: orf23

homologyから機能推測している。
機能解析はされていない。
Related Reference
ACC
B6D1N4
PmId
comment
Klebsiella pneumoniae_hpxO
HpxO

allantoin形成のためのhypoxanthine同化経路に関与するとされるORF。hpxOの不活化はuric acidが分解出来ないことから、uricaseだとしている。酵素学的解析はしていない。既知のuricaseとは相同性がなく、flavin adenine dinucleotide (FAD)-containing monooxygenasesに似ている。
Family/Domain
FD
IPR002938
comment
[IPR002938] Monooxygenase, FAD-binding (Domain)

close this sectionSequence

selected fasta
>putative oxidoreductase [FAD-dependent oxidoreductase]
MTTRRALVVGGGPAGLATALALRDAGWDALVLERSADEGPSGVALTLWPNALSALAAVGA
DKPVRAAGCPADGNQIRAADGRILDDVPGRLMAERFGGRGLALLRADLVEALRAQLSPGM
LRTGARCVGWTEYGGRVRVTLADGGTEVGDLLVGADGLRSTIRRQLLGGGADPLRYAGYP
VWRGIARYDLGAAPGLLTMGRAAQFGLFPLPEGRAYWFATMPLRRGWGEQLPRRVWAARF
DGWHAPIPQVLAATPDEDVLVTDIYDRAPVPRWSAGRVVLVGDAAHPSTPNLGQGTCQAL
EDAVVLGRCLRDDDVAEALPRYEAARRRRADGLTRQARMLGRVGQWSNPVACWIREQMIR
RAPAGPRLRQMAEMFAFE
selected fasta
>putative oxidoreductase [FAD-dependent oxidoreductase]
ATGACGACTCGACGGGCGCTCGTCGTCGGCGGCGGGCCGGCCGGGCTGGCGACCGCGCTG
GCCCTGCGGGACGCGGGCTGGGACGCGCTGGTCCTCGAACGCAGCGCGGACGAGGGGCCC
TCCGGCGTCGCCCTCACCCTCTGGCCGAACGCCCTGTCGGCACTCGCCGCCGTCGGTGCC
GACAAGCCGGTACGGGCGGCCGGCTGCCCGGCCGACGGCAACCAGATCCGCGCCGCCGAC
GGGCGGATCCTCGACGACGTGCCGGGGCGGTTGATGGCGGAGCGCTTCGGCGGCCGGGGC
CTGGCGCTGCTCCGTGCCGACCTGGTCGAGGCGCTGCGCGCCCAACTCTCCCCGGGGATG
CTGCGCACCGGCGCCCGCTGCGTGGGCTGGACGGAGTACGGCGGCCGGGTACGCGTCACC
CTCGCCGACGGCGGCACCGAGGTGGGCGACCTCCTCGTCGGCGCGGACGGACTGCGCTCG
ACGATCCGCCGCCAGTTGCTCGGCGGCGGCGCGGACCCGCTGCGCTACGCGGGTTACCCG
GTCTGGCGCGGCATCGCCCGGTACGACCTCGGCGCCGCGCCGGGCCTGCTCACCATGGGC
CGGGCCGCCCAGTTCGGGCTGTTCCCGCTGCCCGAGGGGCGGGCGTACTGGTTCGCCACC
ATGCCGCTGCGCCGGGGCTGGGGTGAGCAGTTGCCCCGCCGGGTCTGGGCGGCCCGGTTC
GACGGCTGGCACGCGCCCATCCCGCAGGTGCTGGCCGCCACCCCGGACGAGGACGTCCTG
GTCACCGACATCTACGACCGCGCGCCCGTGCCCCGGTGGAGCGCCGGGCGGGTGGTCCTG
GTCGGCGACGCCGCGCACCCCAGCACCCCGAACCTGGGCCAGGGCACCTGCCAGGCGCTG
GAGGACGCCGTCGTGCTGGGCCGCTGCCTGCGCGACGACGACGTGGCCGAGGCCCTGCCC
CGGTACGAGGCGGCGCGCCGCCGTCGGGCGGACGGCCTCACCCGCCAGGCCCGGATGCTC
GGCCGGGTCGGGCAGTGGAGCAACCCGGTGGCCTGCTGGATCCGGGAGCAGATGATCCGC
CGCGCCCCGGCCGGTCCGCGGCTGCGGCAGATGGCGGAGATGTTCGCCTTCGAGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR002938 Monooxygenase, FAD-binding (Domain)
[6-336] 2.2e-22 PF01494
PF01494   FAD_binding_3
IPR003042 Aromatic-ring hydroxylase-like (Domain)
[5-27] 6.79998707392904e-20 PR00420 [148-163] 6.79998707392904e-20 PR00420 [275-290] 6.79998707392904e-20 PR00420 [290-306] 6.79998707392904e-20 PR00420
PR00420   RNGMNOXGNASE
SignalP No significant hit
TMHMM No significant hit
Dynm_00330 Dynm_00330   Dynm_00350 Dynm_00350
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