Dynm_00540 : CDS information

Location

Organism	Micromonospora chersina
Strain	ATCC 53710 (=NBRC 15963)
Entry name	Dynemicin
Contig	EF552206
Start / Stop / Direction	67,972 / 66,977 / - [in whole cluster] 67,972 / 66,977 / - [in contig]
Location	complement(66977..67972) [in whole cluster] complement(66977..67972) [in contig]
Type	CDS
Length	996 bp (331 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	putative transmembrane transport protein
Gene	dynT11
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	ORF39
Reference	ACC B2BM69 PmId [18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008) comment Dynemicin生合成遺伝子クラスターの報告。 dynT11 Transmembrane transport protein genbank: orf39 機能解析はされていない。

Sequence

>hypothetical protein [putative transmembrane transport protein]
MIWMSWRQFRTQALVGVVALAPLAAYLLFTGLDIRQAYDRYQDRCAVADRCLDAMSQFQD
DYRTRLLFLALLLAIIPAVLGVFWGAPLIARELESGTQRLVWNQSVTRRRWLAVKLLFVG
LASMAVAALASLLLTWAASPYDKVSGERFAALAFGARNLTPIAYAALAFVLGTVIGLLMR
KTVPAMALTILAFTLLQFLIPNMVRPHLMEPVTVTKAMTADALRELRGVGTDATVKGLSI
PNAWVTGTSKLLTAGGQPVDARTIDTCLTRPQSGGAADTAACLGERNLHVTVDYQPNSRY
WSFQWIESALYLALAGLLAGFGLWRIQRHVS

>hypothetical protein [putative transmembrane transport protein]
ATGATCTGGATGAGTTGGCGGCAGTTCCGCACCCAGGCCCTCGTCGGCGTCGTCGCGCTG
GCGCCGCTGGCGGCCTACCTCCTGTTCACCGGTCTGGACATCCGGCAGGCGTACGACCGC
TACCAGGACCGGTGCGCGGTCGCCGACCGGTGCCTGGACGCGATGAGCCAGTTCCAGGAC
GACTACCGCACCCGGCTGCTCTTCCTCGCCCTGCTGCTGGCGATCATCCCGGCGGTGCTG
GGCGTGTTCTGGGGTGCGCCGCTGATCGCCCGGGAGTTGGAGTCGGGCACGCAGCGGCTG
GTCTGGAACCAGAGCGTCACCCGGCGCCGCTGGCTGGCGGTCAAGCTGCTCTTCGTCGGC
CTGGCCAGCATGGCGGTCGCGGCCCTGGCCAGCCTGCTGCTGACCTGGGCGGCGAGCCCC
TACGACAAGGTGTCCGGGGAGCGGTTCGCGGCGCTGGCGTTCGGCGCCCGCAACCTGACG
CCGATCGCGTACGCGGCGCTGGCCTTCGTGCTGGGCACGGTCATCGGGCTGCTGATGCGC
AAGACGGTGCCGGCCATGGCGTTGACGATCCTGGCCTTCACACTGCTCCAGTTCCTGATA
CCGAACATGGTCCGGCCGCACCTCATGGAGCCGGTCACCGTGACGAAGGCGATGACCGCC
GACGCGCTCCGCGAGCTGCGTGGGGTGGGCACCGACGCCACGGTGAAGGGCCTGAGCATC
CCGAACGCCTGGGTGACCGGCACCAGCAAGCTGCTCACCGCCGGCGGGCAGCCGGTCGAC
GCCCGGACCATCGACACCTGTCTGACCAGGCCGCAGTCGGGGGGCGCCGCGGACACCGCG
GCCTGCCTCGGCGAGCGGAACCTGCATGTCACGGTCGACTACCAGCCCAACAGCCGCTAC
TGGTCGTTCCAGTGGATCGAGTCGGCGCTCTACCTGGCGCTCGCGGGGCTGCTGGCCGGC
TTCGGCCTGTGGCGGATCCAGCGCCACGTGAGCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	No significant hit
SignalP	No significant hit
TMHMM	Transmembrane 6

Dynm_00530 Dynm_00550