A4092_00050 : CDS information

Location

Organism	Nonomuraea sp.
Strain	ATCC 39727
Entry name	A40926
Contig	AJ561198
Start / Stop / Direction	4,690 / 4,178 / - [in whole cluster] 4,690 / 4,178 / - [in contig]
Location	complement(4178..4690) [in whole cluster] complement(4178..4690) [in contig]
Type	CDS
Length	513 bp (170 aa)

Annotation

Category
Product
Product (GenBank)	hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	ORF5; outside dalbavancin cluster

Sequence

>[hypothetical protein]
MDPGFEAAFRDFVVGRSGALFRTAYLLTGERHAAEDLVQSALAKTAAKWRGLRDPAAIEG
YVRRVMYHEQVSWWRRRSRVAEVSTGWLPDQARDGHADGADLRVMMRAALGRLTPRQRTI
LVLRYFEDLSETEIARVLGIRVGSVRSQIHRSLERLKQTAPELTIMREFG

>[hypothetical protein]
GTGGATCCAGGATTCGAGGCGGCCTTCCGGGACTTCGTCGTCGGCCGGTCGGGGGCGTTG
TTCCGCACGGCGTACCTGCTGACCGGTGAGCGGCACGCCGCCGAGGACCTGGTGCAGTCG
GCCCTGGCCAAGACGGCCGCGAAGTGGCGCGGTCTGCGCGATCCCGCCGCCATCGAGGGG
TACGTGCGCCGGGTCATGTACCACGAGCAGGTGAGCTGGTGGCGGCGGCGGTCACGGGTC
GCGGAGGTGTCCACCGGGTGGCTGCCCGACCAGGCCCGTGACGGGCACGCCGACGGCGCG
GACCTGCGGGTGATGATGCGCGCGGCCCTCGGCCGGCTCACGCCCAGGCAGCGGACCATT
CTGGTGCTGCGCTACTTCGAGGACCTGTCGGAGACCGAGATCGCGCGGGTGCTCGGCATC
AGGGTGGGATCGGTACGCAGCCAGATCCACCGCTCGCTGGAACGCCTGAAGCAGACGGCG
CCTGAACTGACCATCATGAGGGAGTTCGGATGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR007627 RNA polymerase sigma-70 region 2 (Domain) PF04542 Sigma70_r2 IPR011991 Winged helix-turn-helix transcription repressor DNA-binding (Domain) G3DSA:1.10.10.10 Wing_hlx_DNA_bd IPR013249 RNA polymerase sigma factor 70, region 4 type 2 (Domain) PF08281 Sigma70_r4_2 IPR013324 RNA polymerase sigma factor, region 3/4 (Domain) SSF88659 Sigma_r3_r4 IPR013325 RNA polymerase sigma factor, region 2 (Domain) SSF88946 Sigma_r2 IPR014284 RNA polymerase sigma-70 (Domain) TIGR02937 Sigma70-ECF IPR014325 RNA polymerase sigma-E type, actinobacteria (Family) TIGR02983 SigE-fam_strep
SignalP	No significant hit
TMHMM	No significant hit

A4092_00040 A4092_00060