Lydi_00020 Lydi_00020   Lydi_00040 Lydi_00040

Lydi_00030 : CDS information

close this sectionLocation

Organism
StrainTP-A0598 (=NBRC 110027)
Entry nameLydicamycin
Contig
Start / Stop / Direction6,919 / 6,095 / - [in whole cluster]
6,919 / 6,095 / - [in contig]
Locationcomplement(6095..6919) [in whole cluster]
complement(6095..6919) [in contig]
TypeCDS
Length825 bp (274 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
GeneTPA0598_03_00670
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[26380643] Draft genome sequence of marine-derived Streptomyces sp. TP-A0598, a producer of anti-MRSA antibiotic lydicamycins. (Stand Genomic Sci. , 2015)
comment
Streptomyces sp. TP-A0598におけるputative lydicamycin biosynthetic gene clusterの報告。
このclusterが実際にlydicamycin産生に関わるかどうかの実験的な確認はされていない。

TPA0598_03_00670(274aa): unknown

本文中にコメントなし。

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MRSSRGASVAPARVYGVGVCAGHLVVHDPLTGTTHHRDQLITVGRTMLRASEVASHPVAD
LAALGGSSALGVRWSPVVQRDPSPTWVPANSVHRRAARALACAGLLTVDLHEVDPLPTPD
LTDIAGHLTDDGCTVSLTTERCPAERHAEALADCVDALRICVDTAVTRRHRLGPDERERR
LRSLISGTRATVAAGLPTQLYTRVIPPPPGNAATRWLVELADAVGAHGVTFARPQEDGTL
AMPDPADWGAGTPPCGTLKPLDVPLDTVCLRADV
selected fasta
>hypothetical protein [hypothetical protein]
ATGCGGTCGTCGCGCGGTGCATCCGTCGCACCGGCCCGGGTCTACGGTGTCGGCGTCTGC
GCCGGTCACCTCGTCGTGCATGACCCCCTGACCGGTACGACCCACCACCGGGACCAGCTG
ATCACGGTGGGCCGCACGATGCTGCGGGCGAGTGAGGTCGCCTCGCACCCCGTGGCCGAT
CTGGCGGCGCTGGGCGGATCGTCGGCCCTCGGGGTGCGCTGGTCCCCGGTGGTGCAGCGC
GATCCGTCCCCGACGTGGGTGCCCGCGAATTCCGTGCACCGCCGTGCGGCACGCGCACTG
GCCTGCGCCGGGCTGCTCACCGTGGACCTGCACGAGGTCGATCCGCTGCCCACCCCCGAT
CTCACCGACATCGCCGGCCATCTCACCGACGACGGCTGCACGGTCAGCCTCACCACCGAA
CGCTGCCCGGCCGAGCGCCACGCGGAAGCGCTCGCCGACTGCGTCGACGCGCTGCGCATC
TGCGTGGACACCGCGGTCACCCGACGGCATCGATTAGGGCCCGACGAGCGCGAGCGCCGC
CTCAGATCCCTGATCTCCGGCACCCGGGCCACGGTCGCGGCCGGACTGCCCACTCAGCTG
TACACCCGCGTCATCCCGCCCCCGCCGGGGAACGCCGCGACCCGGTGGCTGGTCGAGCTG
GCGGACGCCGTCGGCGCGCACGGGGTGACCTTCGCCCGCCCCCAGGAGGACGGCACGCTG
GCGATGCCGGACCCGGCCGACTGGGGCGCCGGCACCCCGCCCTGCGGAACGCTCAAACCG
CTGGACGTGCCGCTGGACACGGTGTGTCTGCGCGCCGATGTCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		No significant hit
InterPro
Database:interpro:38.0 		No significant hit
SignalP No significant hit
TMHMM No significant hit
Lydi_00020 Lydi_00020   Lydi_00040 Lydi_00040
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