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Microbe : Flavobacterium johnsoniae

Microbe Description

NBRC No. 14942
Scientific name Flavobacterium johnsoniae
Synonymous name Cytophaga johnsonae
Flavobacterium johnsonae (sic)
Flexibacter aurantiacus
History IFO 14942 <- GIFU 2500 <- ATCC 17061 <- C.B. van Niel
Other culture collection No. ATCC 17061=CCUG 35202=CFBP 3036=CIP 100931=DSM 2064=GIFU 2500=JCM 8514=LMG 1341
Other No.
Reference
Not assigned

Functional Potential >>Details

Download
TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseFjoh_1318
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseFjoh_3322
Arsenical resistance(NFUNC_0004)
RequireD
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBFjoh_2991 Fjoh_3083 Fjoh_4422
ARSC1
(NRULE_0017)
Arsenate reductaseFjoh_4784
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseFjoh_0569
Chloramphenicol resistance(NFUNC_0025)
RequireA
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferaseFjoh_0863
Metal-binding protein(NFUNC_0105)
RequireC
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinFjoh_2768 Fjoh_0606
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinFjoh_2768 Fjoh_0606
Phytic acid hydrolysis(NFUNC_0085)
RequireA
PHYT
(NRULE_0258)
3-phytaseFjoh_1367

Genomic Overview

BioProject IDPRJNA16082
Locus_tagFjoh
INSDC entriesCP000685
Sequence statusComplete
Current status
Contig number1
Size(bp) 6,096,872
Gene 5,017
Finishing goal
Assembly method
Coverage
Technology
Reference
  • Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis. (Appl Environ Microbiol. 2009) PMID: 19717629

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
gz
FASTA
gz
FASTA
gz
TSV
uncompressed
1.8 MB 1.6 MB 1.1 MB 390.2 KB