Borre_00020 : CDS information

Location

Organism	Streptomyces parvulus
Strain	Tü4055
Entry name	Borrelidin
Contig	AJ580915
Start / Stop / Direction	501 / 3,107 / + [in whole cluster] 501 / 3,107 / + [in contig]
Location	501..3107 [in whole cluster] 501..3107 [in contig]
Type	CDS
Length	2,607 bp (868 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	ORFB2
Reference	ACC Q70I15 PmId [15112998] Biosynthesis of the angiogenesis inhibitor borrelidin by Streptomyces parvulus Tu4055: cluster analysis and assignment of functions. (Chem Biol. , 2004) comment Borrelidin生合成gene clusterのクローニング。 orfB2: closest similar to hypo borrelidin生合成に必要な機能や役割をもつタンパクに類似性がない、またはputative functionsがborrelidin生合成のために必要かわからないもの。

Sequence

>hypothetical protein [hypothetical protein]
MEAFLLLAAESVLLRRDQSVYVTPGSEPDGPPRAALRRLEAELLGRGHAVSAPLHAVLAS
LDSEELAAAHVRLVGLVDDLLGSDRTHTPLFRRFPRTVPRDTEALYVDRVFAFLLQQPEQ
PCVLCGEARTVLPVSPCAHLVCRLCWDGSDYAGCPLCHRRIDGDDPFLRPVRAVGAARAT
VPGPLRLLRLGTDMTADATTAVDALLARRTPLSPQDRDDLLTLLPLTPAGRGDLPQDIPV
RETKALVLGALVRRAPSRPALRRLLAERLTTATDVLRLLAVLSGGDAGLVTPARFTNVPR
SLRRDLLAVLDGLPAPYLVEDMLRHPTAWKRAAEVLHPFEGHTRHPRAALATAVLRATPL
DPDTAFGAALLTTAAAHPDAVRPDGTRVRPATWAGRLEQAMAEGDAARAAALAGERPGEL
VRRLDVLLRLHTDEALVPELEKALRHGLPKVGPGPLLSALGALRTRTEDRTGTRRVFFPR
GDVTRALSVPERRPALPAGPVSEVVALLEGELLRRFAAGRPYELSVLDAGLTDLTVPFTE
RTAAKALVTVGRGSVQALPEGSVLRLFLHWTEPRGNRTDLDLSVAFFDAEWTFTGLCDYT
NLVHGPDAAIHSGDLTSAPAPRGATEYVDLDLERLARRGDTYAVPLVFSYNNVPFEELPD
AFAGFMALPAEGPRDATYDPRTVRQRFDLAGDSKVCLPMIVDLARRRALWTDTHLPSAGG
FQSIGSHGGGELAAVAGDLWQQFTSGGRATLWDLAVLRAAALSPEVAVVSREPEPAVLRY
RRRAAESEAAFAVRVASHKDAEERLAHTDPDSAAAGLAAGRRVFLATVHGDVRPPGASGT
SYRLFPGAGDASPTLTRVTAGDLLAELG

>hypothetical protein [hypothetical protein]
GTGGAGGCTTTCCTGTTGCTCGCCGCCGAGTCCGTACTGCTGCGCCGTGACCAGAGCGTC
TACGTGACCCCGGGGTCCGAGCCGGACGGTCCGCCGAGGGCCGCACTGCGCCGGCTCGAG
GCCGAACTGCTCGGCCGCGGCCACGCCGTCTCCGCGCCGCTGCACGCGGTCCTCGCCTCC
TTGGACTCCGAGGAACTGGCGGCCGCCCACGTACGCCTCGTCGGACTCGTCGACGACCTG
CTCGGCTCCGACCGCACCCACACCCCGCTCTTCCGCCGCTTCCCGCGCACCGTGCCGCGC
GACACCGAGGCGCTGTACGTGGACCGCGTCTTCGCCTTCCTGCTGCAGCAGCCCGAGCAG
CCCTGCGTGCTGTGCGGCGAGGCGCGCACCGTCCTGCCCGTGTCACCCTGCGCGCACCTG
GTCTGCCGGCTGTGCTGGGACGGCTCCGACTACGCGGGATGCCCGCTGTGCCACCGCAGG
ATCGACGGGGACGACCCCTTCCTGCGTCCGGTCCGTGCCGTCGGCGCCGCCAGGGCGACC
GTACCGGGCCCGCTGCGACTGCTGCGCCTGGGCACCGACATGACCGCCGACGCCACCACG
GCGGTGGACGCCCTGCTGGCCCGCCGCACCCCGCTCTCCCCGCAGGACCGGGACGACCTG
CTCACCCTGTTGCCGCTCACACCGGCCGGCCGGGGCGACCTGCCGCAGGACATCCCGGTC
CGCGAGACCAAGGCGCTGGTCCTGGGCGCGCTGGTGCGCCGGGCACCGTCGCGGCCGGCC
CTGCGGAGGCTGCTCGCCGAGCGGCTCACCACCGCCACCGACGTGCTGCGGCTGCTCGCC
GTGCTCTCGGGCGGCGACGCCGGGCTGGTGACACCGGCACGGTTCACGAACGTTCCCCGT
TCCCTGCGGCGTGACCTGCTCGCCGTCCTCGACGGACTGCCGGCGCCGTACCTGGTCGAG
GACATGCTGCGGCACCCCACGGCGTGGAAGCGGGCCGCGGAGGTGCTGCACCCCTTCGAG
GGGCACACCCGGCACCCGCGCGCCGCGCTCGCCACCGCCGTGCTGCGCGCCACACCGTTG
GACCCGGACACCGCCTTCGGCGCCGCCCTGCTGACCACGGCCGCCGCGCACCCGGACGCC
GTGCGCCCGGACGGCACCCGAGTCCGCCCGGCCACCTGGGCGGGACGGCTGGAGCAGGCG
ATGGCCGAGGGGGACGCCGCTCGGGCCGCGGCCCTCGCCGGGGAGCGGCCCGGCGAACTG
GTGCGCCGCCTGGACGTGTTGCTGCGCCTGCACACCGACGAGGCGCTCGTGCCGGAGCTG
GAGAAGGCCCTGCGGCACGGGCTGCCGAAGGTGGGCCCGGGCCCGCTGCTGTCGGCGCTC
GGGGCGCTGCGGACACGCACCGAGGACCGCACCGGGACCCGGCGCGTGTTCTTCCCGCGG
GGCGACGTCACCCGGGCCCTGTCCGTCCCCGAGCGGCGCCCCGCCCTGCCCGCCGGGCCG
GTGTCCGAGGTGGTCGCCCTGCTGGAGGGGGAACTGCTGCGCCGGTTCGCCGCCGGGCGG
CCCTACGAGCTGTCGGTGCTGGACGCCGGACTGACCGACCTCACCGTGCCGTTCACCGAG
CGGACCGCCGCCAAGGCCCTGGTGACCGTGGGCCGCGGCAGCGTCCAGGCACTCCCCGAG
GGCTCCGTGCTCCGACTGTTCCTGCACTGGACGGAACCCCGGGGCAACCGCACCGACCTG
GACCTGTCCGTCGCCTTCTTCGACGCCGAGTGGACGTTCACCGGCCTGTGCGACTACACG
AACCTGGTGCACGGTCCGGACGCGGCGATCCACTCCGGCGACCTCACGTCGGCCCCGGCG
CCGCGCGGCGCCACCGAGTACGTGGACCTCGACCTGGAGCGGCTGGCGCGGCGGGGAGAC
ACCTACGCCGTCCCGCTGGTGTTCAGCTACAACAACGTCCCGTTCGAGGAACTGCCGGAC
GCCTTCGCCGGGTTCATGGCGCTGCCCGCGGAAGGCCCGCGCGACGCGACCTACGACCCG
CGCACCGTGCGGCAGCGCTTCGACCTCGCGGGCGACTCCAAGGTGTGCCTGCCGATGATC
GTGGACCTGGCCCGCCGGCGGGCGTTGTGGACCGACACCCACCTGCCGTCCGCGGGCGGC
TTCCAGAGCATCGGTTCGCACGGCGGCGGTGAGCTGGCCGCGGTGGCCGGTGACCTCTGG
CAGCAGTTCACCTCGGGCGGCCGGGCGACCCTGTGGGACCTCGCCGTCCTGCGGGCGGCC
GCCCTCTCGCCGGAGGTGGCGGTGGTGTCCCGGGAGCCGGAGCCCGCGGTGCTGCGTTAC
CGGCGGCGGGCGGCCGAGAGCGAGGCCGCGTTCGCCGTCCGAGTCGCGTCCCACAAGGAC
GCCGAGGAACGGCTGGCGCACACCGACCCCGACTCGGCCGCGGCCGGGCTCGCCGCCGGC
CGGCGGGTCTTCCTCGCGACGGTCCACGGTGACGTCCGGCCGCCGGGGGCGTCGGGCACG
TCCTACCGGCTCTTCCCCGGGGCCGGGGACGCCTCACCGACCCTGACCCGCGTGACCGCC
GGGGACCTGCTCGCCGAGCTGGGCTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR001841 Zinc finger, RING-type (Domain) SM00184 RING PS50089 ZF_RING_2 IPR013083 Zinc finger, RING/FYVE/PHD-type (Domain) G3DSA:3.30.40.10 Znf_RING/FYVE/PHD
SignalP	Eukaryota
TMHMM	No significant hit

Borre_00010 Borre_00030