Borre_00020 Borre_00020   Borre_00040 Borre_00040

Borre_00030 : CDS information

close this sectionLocation

Organism
StrainTü4055
Entry nameBorrelidin
Contig
Start / Stop / Direction3,810 / 3,172 / - [in whole cluster]
3,810 / 3,172 / - [in contig]
Locationcomplement(3172..3810) [in whole cluster]
complement(3172..3810) [in contig]
TypeCDS
Length639 bp (212 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORFB3
Reference
ACC
PmId
[15112998] Biosynthesis of the angiogenesis inhibitor borrelidin by Streptomyces parvulus Tu4055: cluster analysis and assignment of functions. (Chem Biol. , 2004)
comment
Borrelidin生合成gene clusterのクローニング。
orfB3: closest similar to hypo

borrelidin非産生であるS.coelicolorのタンパクに明らかな類似があるが、遺伝子配置は異なる。

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MAEQIAGIEIPDSAPAREATDLIRDTTPPLIFHHSRRVYLFGSLQAAALGIRPDPELLYI
AALFHDTGLVPPYRGDDQRFEMDGADQAHAFLLAHGIPEADADTVWTAVALHTTPEVPYR
MAPEIAATTAGVETDVLGLRLGNLTRAQIDAVTAAHPRPDFKKQILRAFTEGFEHRPATT
FGTVNADVLEHFAPGFRRTDFVEVIENSAWPE
selected fasta
>hypothetical protein [hypothetical protein]
ATGGCCGAGCAGATCGCCGGCATCGAGATTCCCGACAGCGCGCCGGCGCGGGAGGCGACC
GACCTGATCCGCGACACCACTCCGCCGCTGATCTTCCACCACTCACGCCGTGTGTACCTC
TTCGGCAGCCTCCAGGCCGCCGCCCTGGGCATCCGCCCCGACCCGGAGCTGCTGTACATC
GCCGCGCTCTTCCACGACACCGGCCTGGTGCCGCCCTACCGCGGTGACGACCAGCGCTTC
GAGATGGACGGTGCCGACCAGGCCCACGCCTTCCTGCTCGCCCACGGCATCCCCGAGGCC
GACGCGGACACCGTGTGGACGGCCGTCGCCCTGCACACCACTCCGGAGGTGCCGTACCGG
ATGGCCCCCGAGATCGCGGCGACCACCGCCGGCGTGGAGACCGACGTGCTCGGCCTGCGG
CTGGGCAATCTCACCCGGGCCCAGATCGACGCGGTCACCGCCGCGCATCCCCGCCCGGAC
TTCAAGAAGCAGATCCTGCGGGCGTTCACCGAGGGGTTCGAGCACCGGCCCGCGACCACC
TTCGGCACGGTGAACGCGGATGTGCTGGAGCACTTCGCGCCCGGCTTCCGGCGTACGGAC
TTCGTCGAGGTCATCGAGAACTCCGCCTGGCCGGAGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR003607 HD/PDEase domain (Domain)
[27-117] 3.1999989904635e-05 SM00471
SM00471   HDc
IPR006674 HD domain (Domain)
[32-118] 1.1e-13 G3DSA:1.10.3210.10
G3DSA:1.10.3210.10   HD
[32-120] 6.00000000000001e-11 PF01966
PF01966   HD
SignalP No significant hit
TMHMM No significant hit
Borre_00020 Borre_00020   Borre_00040 Borre_00040
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