Borre_00030
Borre_00040 : CDS information
Location
| Organism | Streptomyces parvulus |
|---|---|
| Strain | Tü4055 |
| Entry name | Borrelidin |
| Contig | AJ580915 |
| Start / Stop / Direction | 4,924 / 3,935 / - [in whole cluster] 4,924 / 3,935 / - [in contig] |
| Location | complement(3935..4924) [in whole cluster] complement(3935..4924) [in contig] |
| Type | CDS |
| Length | 990 bp (329 aa) |
Annotation
| Category | 4.1 transcriptional regulator |
|---|---|
| Product | putative AraC family transcriptional regulator |
| Product (GenBank) | hypothetical protein |
| Gene | |
| Gene (GenBank) | |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) |
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| Reference |
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| Family/Domain |
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Sequence
>putative AraC family transcriptional regulator [hypothetical protein] MTARAHSVGILVFDGMKMLDLSGPAEVFAEANRFGARYRLGVVSPDGAPVRSSIGLLVPA EADARSAGPPDTLVVVGGDALPGSPVDPRLIDAAKALAARAGRVASVCTGAFVLGAAGLL EGRRATTHWQHTTALARRCPSTRVEPDAIFVKDGATYTSAGVTAGIDLALALLEEDHGPD LARRVARSLVVYLQRAGGQSQFSASLRGPAPRTPVLRQVQDAVQADPAADHSLAALAARV RVSPRHLTRMFRAELDVTPVKYVELIRFDIAKALLDSGHNATEAAALSGFPSYESLRRAF ARHLGLSPTRYRQRFATTVPDAGPRPDGG
>putative AraC family transcriptional regulator [hypothetical protein] ATGACGGCGAGAGCGCACAGCGTGGGCATCCTGGTCTTCGACGGCATGAAGATGCTCGAC CTGTCGGGGCCGGCGGAGGTCTTCGCGGAGGCCAACCGGTTCGGGGCCCGGTACCGGCTC GGCGTCGTCTCCCCGGACGGGGCGCCGGTGCGTTCGTCCATCGGCCTGCTGGTCCCGGCC GAGGCGGACGCGCGTTCCGCCGGCCCGCCGGACACGCTCGTCGTCGTCGGCGGTGACGCG CTGCCCGGCTCGCCCGTCGACCCACGGCTCATCGACGCCGCGAAGGCGCTGGCGGCCCGG GCCGGACGCGTCGCCTCGGTGTGCACCGGCGCCTTCGTGCTGGGTGCCGCGGGTCTGCTG GAGGGCAGACGGGCGACGACGCACTGGCAGCACACCACCGCGCTGGCCCGCCGCTGTCCG TCGACACGCGTGGAGCCCGACGCGATCTTCGTCAAGGACGGGGCGACCTACACGTCCGCC GGCGTGACGGCGGGCATCGACCTGGCCCTCGCGCTGCTGGAGGAGGACCACGGGCCCGAT CTCGCCCGCAGGGTCGCGCGCTCGCTGGTGGTGTACCTGCAGCGGGCCGGCGGCCAGTCG CAGTTCTCCGCCTCGTTGCGGGGCCCGGCGCCGCGGACGCCCGTGCTGCGGCAGGTCCAG GACGCCGTACAGGCCGATCCGGCCGCCGACCACAGTCTGGCGGCGTTGGCGGCGCGCGTG CGGGTCAGCCCCCGGCATCTGACCCGGATGTTCCGGGCCGAGCTGGACGTCACGCCCGTG AAGTACGTGGAGCTGATCCGTTTCGACATCGCCAAGGCGCTGCTCGACTCCGGGCACAAC GCCACCGAGGCCGCCGCGCTGTCGGGTTTCCCCAGCTACGAGAGCCTGCGCCGGGCCTTC GCCCGTCATCTGGGGCTGTCGCCCACCCGCTACCGGCAGCGCTTCGCCACCACCGTGCCG GACGCCGGCCCGCGCCCGGACGGCGGCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
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|---|---|
| InterPro Database:interpro:38.0 |
IPR009057 Homeodomain-like (Domain)
IPR018060 DNA binding HTH domain, AraC-type (Domain)
IPR025628 DJ-1 domain, InhA-type (Domain)
|
| SignalP |  ![[1-29] 0.199 Signal](../../img/R.gif "[1-29] 0.199 Signal"){kind=small} |
| TMHMM | No significant hit |
![[212-263] 7.49999605851445e-10 SSF46689](../../img/B.gif "[212-263] 7.49999605851445e-10 SSF46689"){kind=small}
![[219-267] 8.00000000000001e-19 G3DSA:1.10.10.60](../../img/X2.gif "[219-267] 8.00000000000001e-19 G3DSA:1.10.10.60"){kind=small}
![[217-314] PS01124](../../img/M.gif "[217-314] PS01124"){kind=small}
![[11-174] 1.09999999999999e-40 PF13278](../../img/H.gif "[11-174] 1.09999999999999e-40 PF13278"){kind=small}
