Borre_00060 : CDS information

Location

Organism	Streptomyces parvulus
Strain	Tü4055
Entry name	Borrelidin
Contig	AJ580915
Start / Stop / Direction	6,518 / 5,961 / - [in whole cluster] 6,518 / 5,961 / - [in contig]
Location	complement(5961..6518) [in whole cluster] complement(5961..6518) [in contig]
Type	CDS
Length	558 bp (185 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	ORFB6
Reference	ACC Q70I11 PmId [15112998] Biosynthesis of the angiogenesis inhibitor borrelidin by Streptomyces parvulus Tu4055: cluster analysis and assignment of functions. (Chem Biol. , 2004) comment Borrelidin生合成gene clusterのクローニング。 orfB6: closest similar to hypo borrelidin非産生であるS.coelicolorのタンパクに明らかな類似があるが、遺伝子配置は異なる。

Sequence

>hypothetical protein [hypothetical protein]
MGVMIGPAGRERDEGDHVTQQAPVATDERRVFVDKQTPGAYKAFVAAAESVREAAAAAGL
DRLLVELVNIRVSQLNACAYCLSLHTRAALRAGETTQRLAVLPAWRDTELFTARERAALA
LAEATTRPADAAAQSAAYAQARGVLSDDEVSAVIWVAISINAFNRVSVLSKHPVRGAAPA
PVSPA

>hypothetical protein [hypothetical protein]
ATGGGGGTGATGATAGGACCCGCCGGAAGAGAGCGCGACGAAGGAGACCACGTGACACAG
CAGGCCCCGGTGGCGACGGACGAGCGGCGGGTCTTCGTCGACAAGCAGACCCCCGGCGCG
TACAAAGCGTTCGTGGCCGCGGCGGAATCGGTGCGGGAGGCCGCCGCGGCGGCCGGCCTG
GACCGCCTCCTCGTGGAACTGGTGAACATCCGCGTCTCCCAACTCAATGCCTGTGCCTAC
TGTCTCAGTCTGCACACCAGGGCGGCGCTGCGGGCCGGCGAGACGACCCAGCGCCTGGCG
GTGCTGCCCGCCTGGCGGGACACCGAGCTGTTCACCGCTCGGGAGCGGGCGGCGCTCGCC
CTCGCGGAGGCGACCACCCGTCCGGCGGACGCCGCCGCGCAGAGCGCCGCCTACGCGCAG
GCACGGGGCGTCCTGTCGGACGACGAGGTCTCCGCCGTGATCTGGGTGGCGATCAGCATC
AACGCCTTCAACCGGGTCTCCGTCCTGAGCAAGCACCCGGTGCGCGGCGCCGCACCCGCT
CCCGTGTCGCCGGCGTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR003779 Carboxymuconolactone decarboxylase (Domain) PF02627 CMD IPR004675 Alkylhydroperoxidase AhpD core (Domain) TIGR00778 AhpD_dom
SignalP	No significant hit
TMHMM	No significant hit

Borre_00050 Borre_00070